RNA–Protein interactions for RNA: ENSMUST00000159910.7

Vcan-206, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 8,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-206ENSMUST00000159910 Smc2Q8CG48 1191 aaKnown RBP9.09□□□□□ -0.95
Vcan-206ENSMUST00000159910 GsdmaQ9EST1 446 aa9.09□□□□□ -0.95
Vcan-206ENSMUST00000159910 Cetn4Q8K4K1 168 aa9.09□□□□□ -0.95
Vcan-206ENSMUST00000159910 ErbinQ80TH2 1402 aa9.09□□□□□ -0.95
Vcan-206ENSMUST00000159910 Pabpn1Q8CCS6 302 aaKnown RBP9.09□□□□□ -0.95
Vcan-206ENSMUST00000159910 ScaperF8VQ70 1398 aaKnown RBP9.09□□□□□ -0.95
Vcan-206ENSMUST00000159910 Mnat1P51949 309 aa9.08□□□□□ -0.96
Vcan-206ENSMUST00000159910 Tubb6Q922F4 447 aa9.08□□□□□ -0.96
Vcan-206ENSMUST00000159910 Slc4a10Q5DTL9 1118 aa9.08□□□□□ -0.96
Vcan-206ENSMUST00000159910 Plin1Q8CGN5 517 aa9.08□□□□□ -0.96
Vcan-206ENSMUST00000159910 Wdr78E9PYY5 807 aa9.08□□□□□ -0.96
Vcan-206ENSMUST00000159910 Ccdc43Q9CR29 222 aaKnown RBP9.08□□□□□ -0.96
Vcan-206ENSMUST00000159910 Prdm16A2A935 1275 aa9.08□□□□□ -0.96
Vcan-206ENSMUST00000159910 Slc4a1apE9PX68 744 aa9.08□□□□□ -0.96
Vcan-206ENSMUST00000159910 Prm3Q62100 101 aa9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 Soga1E1U8D0 1418 aa9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 CrcpO35427 148 aa9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 Mcm2P97310 904 aa9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 ChgaP26339 463 aaKnown RBP9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 LarsQ8BMJ2 1178 aa9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 Calcoco1Q8CGU1 691 aa9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 Usp47Q8BY87 1376 aa9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 Fan1Q69ZT1 1020 aa9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 NmiO35309 314 aa9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 Nop14Q8R3N1 860 aaKnown RBP9.07□□□□□ -0.96
Vcan-206ENSMUST00000159910 Gnai1B2RSH2 354 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Gnai3Q9DC51 354 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 G3bp1P97855 465 aaKnown RBP9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Tex35Q14BK3 207 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 ErmnQ5EBJ4 281 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Pip4k2aO70172 405 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Smg6P61406 1418 aaKnown RBP9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Trim58Q5NCC9 485 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Spata24Q6P926 205 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Dhx16G3X8X0 1044 aaKnown RBP9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Prl7d1P04769 244 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Cep112Q5PR68 954 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Drc7Q6V3W6 876 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Gpatch3Q8BIY1 525 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Rec8Q8C5S7 591 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Mis12Q9CY25 206 aa9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Psma5Q9Z2U1 241 aaKnown RBP9.06□□□□□ -0.96
Vcan-206ENSMUST00000159910 Fyb1O35601 819 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Cluap1Q8R3P7 413 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Anapc15-psA0A140T8L6 141 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 GorabQ8BRM2 368 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Rbm10Q99KG3 930 aaKnown RBP9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Eif3aP23116 1344 aaKnown RBP9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Fam184bQ0KK56 942 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Clul1Q3ZRW6 464 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Utp3Q9JI13 469 aaKnown RBP9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Gsto1O09131 240 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Nf2P46662 596 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Tex2Q6ZPJ0 1128 aaKnown RBP9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Ppm1fQ8CGA0 452 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Ubxn4Q8VCH8 506 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Ccdc171E9Q1U1 1324 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Wdr63B2RY71 923 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Otud6bQ8K2H2 294 aa9.05□□□□□ -0.96
Vcan-206ENSMUST00000159910 Ddx46Q569Z5 1032 aaKnown RBP9.04□□□□□ -0.96
Vcan-206ENSMUST00000159910 Dixdc1Q80Y83 711 aa9.04□□□□□ -0.96
Vcan-206ENSMUST00000159910 Luc7lQ9CYI4 371 aaKnown RBP9.04□□□□□ -0.96
Vcan-206ENSMUST00000159910 Cpsf2O35218 782 aaKnown RBP9.04□□□□□ -0.96
Vcan-206ENSMUST00000159910 Gse1Q3U3C9 1213 aa9.04□□□□□ -0.96
Vcan-206ENSMUST00000159910 HmmrQ00547 794 aaKnown RBP9.04□□□□□ -0.96
Vcan-206ENSMUST00000159910 Ccdc60Q8C4J0 545 aa9.04□□□□□ -0.96
Vcan-206ENSMUST00000159910 Jakmip3Q5DTN8 844 aa9.03□□□□□ -0.96
Vcan-206ENSMUST00000159910 Atf3Q60765 181 aa9.03□□□□□ -0.96
Vcan-206ENSMUST00000159910 March6Q6ZQ89 909 aa9.03□□□□□ -0.96
Vcan-206ENSMUST00000159910 Zfp651E9PZ11 729 aa9.03□□□□□ -0.96
Vcan-206ENSMUST00000159910 Arid3aQ62431 601 aa9.03□□□□□ -0.96
Vcan-206ENSMUST00000159910 Dnaaf4Q8R368 420 aa9.03□□□□□ -0.96
Vcan-206ENSMUST00000159910 Sirt1Q923E4 737 aa9.03□□□□□ -0.96
Vcan-206ENSMUST00000159910 Ercc6lQ8BHK9 1240 aa9.03□□□□□ -0.96
Vcan-206ENSMUST00000159910 Nolc1E9Q5C9 702 aaKnown RBP9.02□□□□□ -0.96
Vcan-206ENSMUST00000159910 ClasrpQ8CFC7 668 aa9.02□□□□□ -0.96
Vcan-206ENSMUST00000159910 Mical1Q8VDP3 1048 aa9.02□□□□□ -0.96
Vcan-206ENSMUST00000159910 Znf330Q922H9 316 aa9.02□□□□□ -0.96
Vcan-206ENSMUST00000159910 SarnpQ9D1J3 210 aaKnown RBP9.02□□□□□ -0.97
Vcan-206ENSMUST00000159910 Samd1D3YXK1 519 aa9.02□□□□□ -0.97
Vcan-206ENSMUST00000159910 Fam184aE9PW83 1143 aa9.02□□□□□ -0.97
Vcan-206ENSMUST00000159910 Ccdc39Q9D5Y1 937 aa9.02□□□□□ -0.97
Vcan-206ENSMUST00000159910 Ncbp1Q3UYV9 790 aaKnown RBP9.02□□□□□ -0.97
Vcan-206ENSMUST00000159910 Ccp110Q7TSH4 1004 aa9.02□□□□□ -0.97
Vcan-206ENSMUST00000159910 Erlin2Q8BFZ9 340 aa9.02□□□□□ -0.97
Vcan-206ENSMUST00000159910 Dhx29Q6PGC1 1365 aaKnown RBP9.02□□□□□ -0.97
Vcan-206ENSMUST00000159910 Jakmip2D3YXK0 820 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 Gbp4Q61107 620 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 PsapQ61207 557 aaKnown RBP9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 Plekhd1B2RPU2 505 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 Kif2aP28740 705 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 Usp40Q8BWR4 1235 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 TxlnbQ8VBT1 685 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 Gm21190A0A0G2JGJ6 266 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 Q8C5K5 320 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 CrbnQ8C7D2 445 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 Gimap6Q8K349 305 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 PdcQ9QW08 244 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 Cfap99A0A140LIX9 648 aa9.01□□□□□ -0.97
Vcan-206ENSMUST00000159910 Pank3Q8R2W9 370 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms