RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Rsph3aQ3UFY4 516 aa10.99□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Arhgef40Q3UPH7 1517 aa10.99□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Dennd4bQ3U1Y4 1499 aa10.98□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Rock1P70335 1354 aa10.98□□□□□ -0.65
Col28a1-201ENSMUST00000115537 NpatQ8BMA5 1420 aa10.98□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Rfx1P48377 963 aa10.98□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Cluap1Q8R3P7 413 aa10.98□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Ylpm1Q9R0I7 1386 aaKnown RBP10.97□□□□□ -0.65
Col28a1-201ENSMUST00000115537 GnpatP98192 678 aa10.97□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Kif16bB1AVY7 1312 aa10.97□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Rtf1A2AQ19 715 aaKnown RBP10.97□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Il4rP16382 810 aa10.97□□□□□ -0.65
Col28a1-201ENSMUST00000115537 U2surpQ6NV83 1029 aaKnown RBP10.97□□□□□ -0.65
Col28a1-201ENSMUST00000115537 Abca5Q8K448 1642 aa10.96□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Abcc2Q8VI47 1543 aa10.96□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Cdk19Q8BWD8 501 aa10.96□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Map3k4O08648 1597 aa10.95□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Abca16E9PWJ7 1678 aa10.95□□□□□ -0.66
Col28a1-201ENSMUST00000115537 DroshaQ5HZJ0 1373 aaKnown RBP10.95□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Plekhh1Q80TI1 1356 aa10.95□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Clcn1Q64347 994 aa10.95□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Fam13bQ8K2H3 851 aa10.95□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Ssh2Q5SW75 1423 aa10.95□□□□□ -0.66
Col28a1-201ENSMUST00000115537 TnikP83510 1323 aa10.94□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Znf518aB2RRF6 1478 aaKnown RBP10.94□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Q3UJC8 639 aa10.94□□□□□ -0.66
Col28a1-201ENSMUST00000115537 TatQ8QZR1 454 aa10.94□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Slc52a2Q9D8F3 450 aa10.94□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Pibf1E9Q6K3 756 aa10.94□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Tnnt1O88346 262 aa10.94□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Gm10563F6WIE4 79 aa10.94□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Gse1Q3U3C9 1213 aa10.93□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Pdlim2Q8R1G6 349 aa10.93□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Tmc1Q8R4P5 757 aa10.93□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Kif7B7ZNG0 1348 aa10.93□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Ppp2r3aB2RXC8 1150 aa10.93□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Fbln2P37889 1221 aa10.93□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Asxl2Q8BZ32 1370 aa10.93□□□□□ -0.66
Col28a1-201ENSMUST00000115537 KnstrnQ9D9Z1 312 aaKnown RBP10.93□□□□□ -0.66
Col28a1-201ENSMUST00000115537 FanciQ8K368 1330 aa10.92□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Tsen2Q6P7W5 460 aa10.92□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Pank1Q8K4K6 548 aa10.92□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Sf3b2Q3UJB0 878 aaKnown RBP10.92□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Zscan10Q3URR7 782 aa10.92□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Dmrt2Q8BG36 561 aa10.92□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Ciz1Q8VEH2 845 aa10.92□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Rrbp1Q99PL5 1605 aaKnown RBP10.92□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Synj2Q9D2G5 1434 aa10.91□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Adgrb2Q8CGM1 1561 aa10.91□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Nom1Q3UFM5 854 aaKnown RBP10.91□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Fez1Q8K0X8 392 aa10.91□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Acsbg1Q99PU5 721 aa10.91□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Adcy10Q8C0T9 1614 aa10.91□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Kdm2bQ6P1G2 1309 aa10.91□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Ccdc30Q8BVF4 654 aa10.91□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Tmem94Q7TSH8 1360 aa10.9□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Golga2Q921M4 999 aa10.9□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Rfx7F8VPJ6 1459 aa10.9□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Tspyl2Q7TQI8 677 aa10.9□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Gimap5Q8BWF2 308 aa10.9□□□□□ -0.66
Col28a1-201ENSMUST00000115537 GorabQ8BRM2 368 aa10.9□□□□□ -0.66
Col28a1-201ENSMUST00000115537 Atp7aQ64430 1491 aa10.89□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Gli2Q0VGT2 1544 aa10.89□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Arhgef11Q68FM7 1552 aa10.89□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Trim58Q5NCC9 485 aa10.89□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Yeats2Q3TUF7 1407 aa10.88□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Dnajc5gQ8C632 165 aa10.88□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Tom1O88746 492 aa10.88□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Dnmt1P13864 1620 aaKnown RBP10.88□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Znf326O88291 580 aa10.88□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Kiaa0754Q69ZZ9 979 aa10.88□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Slc5a4bQ91ZP4 660 aa10.88□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Gm21698A0A087WQP8 267 aa10.87□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Gm21671G3UY31 267 aa10.87□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Adam1bQ8R534 806 aa10.87□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Zranb1Q7M760 708 aa10.87□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Lekr1B2RVN1 116 aa10.87□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Q3TQI7 289 aaKnown RBP10.87□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Lrrc9Q8CDN9 1456 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Zranb3Q6NZP1 1069 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Stk31Q99MW1 1018 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Col17a1Q07563 1470 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Gm10471E9Q1C7 252 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Irf5P56477 497 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Lmtk2Q3TYD6 1471 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Cfap74Q3UY96 1578 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Catsper2A2ARP9 588 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Gpatch11Q3UFS4 262 aa10.86□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Pdcl2Q78Y63 240 aa10.85□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Atl3Q91YH5 541 aa10.85□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Erich3F6QRE9 1637 aa10.85□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Casc1Q6TDU8 730 aa10.85□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Tmco5bQ80X59 307 aa10.85□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Casq1O09165 405 aa10.84□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Terf2O35144 541 aa10.84□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Cbx1P83917 185 aaKnown RBP10.84□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Dhx30Q99PU8 1217 aaKnown RBP10.84□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Dhx16G3X8X0 1044 aaKnown RBP10.84□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Trim30aP15533 496 aa10.84□□□□□ -0.67
Col28a1-201ENSMUST00000115537 Sugp2Q8CH09 1067 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms