RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Trpm2Q91YD4 1506 aa9.08□□□□□ -0.96
Chm-202ENSMUST00000113388 Ahdc1Q6PAL7 1594 aaKnown RBP9.08□□□□□ -0.96
Chm-202ENSMUST00000113388 DroshaQ5HZJ0 1373 aaKnown RBP9.08□□□□□ -0.96
Chm-202ENSMUST00000113388 EspnQ9ET47 871 aa9.08□□□□□ -0.96
Chm-202ENSMUST00000113388 Rfx7F8VPJ6 1459 aa9.08□□□□□ -0.96
Chm-202ENSMUST00000113388 Supt6hQ62383 1726 aaKnown RBP9.07□□□□□ -0.96
Chm-202ENSMUST00000113388 Psme1P97371 249 aa9.07□□□□□ -0.96
Chm-202ENSMUST00000113388 Trim30dE9PWL0 497 aa9.07□□□□□ -0.96
Chm-202ENSMUST00000113388 PogkQ80TC5 607 aa9.07□□□□□ -0.96
Chm-202ENSMUST00000113388 Paf1Q8K2T8 535 aa9.07□□□□□ -0.96
Chm-202ENSMUST00000113388 Myom3A2ABU4 1439 aa9.07□□□□□ -0.96
Chm-202ENSMUST00000113388 Brwd3A2AHJ4 1799 aa9.06□□□□□ -0.96
Chm-202ENSMUST00000113388 Myom2Q14BI5 1463 aa9.06□□□□□ -0.96
Chm-202ENSMUST00000113388 Hfm1D3Z4R1 1434 aa9.06□□□□□ -0.96
Chm-202ENSMUST00000113388 Mroh3A0A1D5RM54 893 aa9.06□□□□□ -0.96
Chm-202ENSMUST00000113388 Hsp90b1P08113 802 aaKnown RBP9.06□□□□□ -0.96
Chm-202ENSMUST00000113388 Hspa5P20029 655 aaKnown RBP9.06□□□□□ -0.96
Chm-202ENSMUST00000113388 CalrP14211 416 aaKnown RBP9.05□□□□□ -0.96
Chm-202ENSMUST00000113388 Kdm2aP59997 1161 aa9.05□□□□□ -0.96
Chm-202ENSMUST00000113388 GphnQ8BUV3 769 aaKnown RBP9.05□□□□□ -0.96
Chm-202ENSMUST00000113388 Abca6Q8K441 1624 aa9.05□□□□□ -0.96
Chm-202ENSMUST00000113388 Mrs2Q5NCE8 434 aa9.05□□□□□ -0.96
Chm-202ENSMUST00000113388 Grwd1Q810D6 446 aaKnown RBP9.05□□□□□ -0.96
Chm-202ENSMUST00000113388 Kiaa0754Q69ZZ9 979 aa9.05□□□□□ -0.96
Chm-202ENSMUST00000113388 ShprhQ7TPQ3 1674 aa9.04□□□□□ -0.96
Chm-202ENSMUST00000113388 Kif1bQ60575 1816 aaKnown RBP9.04□□□□□ -0.96
Chm-202ENSMUST00000113388 Adam1bQ8R534 806 aa9.04□□□□□ -0.96
Chm-202ENSMUST00000113388 Asxl1P59598 1514 aa9.04□□□□□ -0.96
Chm-202ENSMUST00000113388 Ercc6l2Q9JIM3 1537 aa9.04□□□□□ -0.96
Chm-202ENSMUST00000113388 Nsd2Q8BVE8 1365 aa9.04□□□□□ -0.96
Chm-202ENSMUST00000113388 Fam114a1Q9D281 569 aa9.04□□□□□ -0.96
Chm-202ENSMUST00000113388 Kcnj4P52189 445 aa9.03□□□□□ -0.96
Chm-202ENSMUST00000113388 Chmp4cQ9D7F7 232 aa9.03□□□□□ -0.96
Chm-202ENSMUST00000113388 Asxl2Q8BZ32 1370 aa9.03□□□□□ -0.96
Chm-202ENSMUST00000113388 Lekr1B2RVN1 116 aa9.03□□□□□ -0.96
Chm-202ENSMUST00000113388 Ak7Q9D2H2 614 aa9.03□□□□□ -0.96
Chm-202ENSMUST00000113388 Plch2A2AP18 1501 aa9.03□□□□□ -0.96
Chm-202ENSMUST00000113388 Atp7aQ64430 1491 aa9.02□□□□□ -0.96
Chm-202ENSMUST00000113388 Map7O88735 730 aa9.02□□□□□ -0.96
Chm-202ENSMUST00000113388 Ylpm1Q9R0I7 1386 aaKnown RBP9.02□□□□□ -0.97
Chm-202ENSMUST00000113388 Prex1Q69ZK0 1650 aa9.02□□□□□ -0.97
Chm-202ENSMUST00000113388 ErbinQ80TH2 1402 aa9.02□□□□□ -0.97
Chm-202ENSMUST00000113388 Robo2Q7TPD3 1470 aa9.01□□□□□ -0.97
Chm-202ENSMUST00000113388 Cbx1P83917 185 aaKnown RBP9.01□□□□□ -0.97
Chm-202ENSMUST00000113388 B4galnt3Q6L8S8 986 aa9.01□□□□□ -0.97
Chm-202ENSMUST00000113388 Topbp1Q6ZQF0 1515 aa9.01□□□□□ -0.97
Chm-202ENSMUST00000113388 Plin1Q8CGN5 517 aa9.01□□□□□ -0.97
Chm-202ENSMUST00000113388 Stk26Q99JT2 416 aa9□□□□□ -0.97
Chm-202ENSMUST00000113388 Pes1Q9EQ61 584 aaKnown RBP9□□□□□ -0.97
Chm-202ENSMUST00000113388 Q9D9H8 365 aa9□□□□□ -0.97
Chm-202ENSMUST00000113388 Cald1E9QA15 768 aaKnown RBP9□□□□□ -0.97
Chm-202ENSMUST00000113388 Psmd1Q3TXS7 953 aa9□□□□□ -0.97
Chm-202ENSMUST00000113388 Abca17E9PX95 1733 aa9□□□□□ -0.97
Chm-202ENSMUST00000113388 Trpm1Q2TV84 1622 aa9□□□□□ -0.97
Chm-202ENSMUST00000113388 Washc2Q6PGL7 1334 aa9□□□□□ -0.97
Chm-202ENSMUST00000113388 Bcl11bQ99PV8 884 aa8.99□□□□□ -0.97
Chm-202ENSMUST00000113388 Shq1Q7TMX5 569 aa8.99□□□□□ -0.97
Chm-202ENSMUST00000113388 Myo5cE9Q1F5 1742 aa8.99□□□□□ -0.97
Chm-202ENSMUST00000113388 Ifit1bl1D3Z6F0 470 aa8.99□□□□□ -0.97
Chm-202ENSMUST00000113388 Zrsr2Q62377 462 aaKnown RBP8.99□□□□□ -0.97
Chm-202ENSMUST00000113388 Ccdc96Q9CR92 584 aa8.99□□□□□ -0.97
Chm-202ENSMUST00000113388 Ripply1Q2WG77 201 aa8.98□□□□□ -0.97
Chm-202ENSMUST00000113388 MpndQ3TV65 487 aa8.98□□□□□ -0.97
Chm-202ENSMUST00000113388 Uggt2E9Q4X2 1504 aa8.98□□□□□ -0.97
Chm-202ENSMUST00000113388 Tnnt1O88346 262 aa8.97□□□□□ -0.97
Chm-202ENSMUST00000113388 Gse1Q3U3C9 1213 aa8.97□□□□□ -0.97
Chm-202ENSMUST00000113388 Skint5A7XUY5 1461 aa8.97□□□□□ -0.97
Chm-202ENSMUST00000113388 Talpid3E9PV87 1520 aa8.97□□□□□ -0.97
Chm-202ENSMUST00000113388 Dbr1Q923B1 550 aa8.97□□□□□ -0.97
Chm-202ENSMUST00000113388 Usp47Q8BY87 1376 aa8.97□□□□□ -0.97
Chm-202ENSMUST00000113388 Sox12Q04890 314 aa8.96□□□□□ -0.97
Chm-202ENSMUST00000113388 Kiaa0753Q6A000 959 aa8.96□□□□□ -0.97
Chm-202ENSMUST00000113388 Liat1Q810M6 228 aa8.96□□□□□ -0.97
Chm-202ENSMUST00000113388 Mak16Q8BGS0 296 aaKnown RBP8.96□□□□□ -0.97
Chm-202ENSMUST00000113388 Abcc6Q9R1S7 1498 aa8.96□□□□□ -0.97
Chm-202ENSMUST00000113388 PtprgQ05909 1442 aa8.96□□□□□ -0.97
Chm-202ENSMUST00000113388 SetQ9EQU5 289 aaKnown RBP8.96□□□□□ -0.98
Chm-202ENSMUST00000113388 Knl1Q66JQ7 1612 aa8.96□□□□□ -0.98
Chm-202ENSMUST00000113388 Fan1Q69ZT1 1020 aa8.96□□□□□ -0.98
Chm-202ENSMUST00000113388 Gtpbp4Q99ME9 634 aaKnown RBP8.96□□□□□ -0.98
Chm-202ENSMUST00000113388 Adgrb3Q80ZF8 1522 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 Dip2bQ3UH60 1574 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 Topaz1E5FYH1 1653 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 Scn4aQ9ER60 1841 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 Ofd1Q80Z25 1017 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 Arhgap23Q69ZH9 1483 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 Prrc2bQ7TPM1 1486 aaKnown RBP8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 RictorQ6QI06 1708 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 AnkarA2RT91 1465 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 Trim30aP15533 496 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 Trerf1Q8BXJ2 1205 aa8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 AdnpQ9Z103 1108 aaKnown RBP8.95□□□□□ -0.98
Chm-202ENSMUST00000113388 Akap12Q9WTQ5 1684 aa8.94□□□□□ -0.98
Chm-202ENSMUST00000113388 Srpk2O54781 681 aaKnown RBP8.94□□□□□ -0.98
Chm-202ENSMUST00000113388 Rapgef3Q8VCC8 918 aa8.94□□□□□ -0.98
Chm-202ENSMUST00000113388 Anp32eP97822 260 aaKnown RBP8.94□□□□□ -0.98
Chm-202ENSMUST00000113388 Gm20521D3Z5F7 333 aa8.93□□□□□ -0.98
Chm-202ENSMUST00000113388 Irf5P56477 497 aa8.93□□□□□ -0.98
Chm-202ENSMUST00000113388 Edc4Q3UJB9 1406 aaKnown RBP8.93□□□□□ -0.98
Chm-202ENSMUST00000113388 Anapc15-psA0A140T8L6 141 aa8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms