RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 MaddQ80U28 1577 aa24.42■■□□□ 1.5
Trim47-202ENSMUST00000106441 Lrrc7Q80TE7 1490 aa24.41■■□□□ 1.5
Trim47-202ENSMUST00000106441 Slit3Q9WVB4 1523 aa24.41■■□□□ 1.5
Trim47-202ENSMUST00000106441 Lmtk3Q5XJV6 1424 aa24.41■■□□□ 1.5
Trim47-202ENSMUST00000106441 Sipa1l1Q8C0T5 1782 aa24.4■■□□□ 1.5
Trim47-202ENSMUST00000106441 Asxl2Q8BZ32 1370 aa24.4■■□□□ 1.5
Trim47-202ENSMUST00000106441 Cyb5rlB1AS42 316 aa24.38■■□□□ 1.49
Trim47-202ENSMUST00000106441 IghaA0A0A6YXW6 389 aa24.37■■□□□ 1.49
Trim47-202ENSMUST00000106441 L3mbtl2P59178 703 aa24.36■■□□□ 1.49
Trim47-202ENSMUST00000106441 PzpQ61838 1495 aa24.36■■□□□ 1.49
Trim47-202ENSMUST00000106441 Anp32bQ9EST5 272 aaKnown RBP24.36■■□□□ 1.49
Trim47-202ENSMUST00000106441 Kank1E9Q238 1360 aa24.34■■□□□ 1.49
Trim47-202ENSMUST00000106441 Tubgcp6G5E8P0 1769 aa24.34■■□□□ 1.49
Trim47-202ENSMUST00000106441 DnmbpQ6TXD4 1580 aa24.33■■□□□ 1.49
Trim47-202ENSMUST00000106441 Mink1Q9JM52 1308 aa24.33■■□□□ 1.49
Trim47-202ENSMUST00000106441 PrkcshO08795 521 aa24.33■■□□□ 1.49
Trim47-202ENSMUST00000106441 Usp40Q8BWR4 1235 aa24.33■■□□□ 1.49
Trim47-202ENSMUST00000106441 Ccdc27Q3V036 639 aa24.33■■□□□ 1.48
Trim47-202ENSMUST00000106441 Nphp4P59240 1425 aa24.33■■□□□ 1.48
Trim47-202ENSMUST00000106441 Upf2A2AT37 1269 aaKnown RBP24.32■■□□□ 1.48
Trim47-202ENSMUST00000106441 Tcerg1Q8CGF7 1100 aaKnown RBP24.32■■□□□ 1.48
Trim47-202ENSMUST00000106441 Pak3Q61036 559 aa24.31■■□□□ 1.48
Trim47-202ENSMUST00000106441 Stk26Q99JT2 416 aa24.31■■□□□ 1.48
Trim47-202ENSMUST00000106441 Stard8Q8K031 1019 aa24.3■■□□□ 1.48
Trim47-202ENSMUST00000106441 Zbtb4Q5F293 982 aa24.3■■□□□ 1.48
Trim47-202ENSMUST00000106441 Egfem1Q8C088 590 aa24.3■■□□□ 1.48
Trim47-202ENSMUST00000106441 Srcin1Q9QWI6 1250 aa24.3■■□□□ 1.48
Trim47-202ENSMUST00000106441 Ift172Q6VH22 1749 aa24.29■■□□□ 1.48
Trim47-202ENSMUST00000106441 Ccdc9Q8VC31 543 aaKnown RBP24.29■■□□□ 1.48
Trim47-202ENSMUST00000106441 IqubQ8CDK3 788 aa24.28■■□□□ 1.48
Trim47-202ENSMUST00000106441 Gtf2e1Q9D0D5 440 aa24.28■■□□□ 1.48
Trim47-202ENSMUST00000106441 Med1Q925J9 1575 aa24.27■■□□□ 1.48
Trim47-202ENSMUST00000106441 Pik3r4Q8VD65 1358 aa24.27■■□□□ 1.47
Trim47-202ENSMUST00000106441 Zscan21Q07231 555 aa24.26■■□□□ 1.47
Trim47-202ENSMUST00000106441 Utp14aQ640M1 767 aaKnown RBP24.26■■□□□ 1.47
Trim47-202ENSMUST00000106441 Stag3O70576 1240 aa24.25■■□□□ 1.47
Trim47-202ENSMUST00000106441 Arap3Q8R5G7 1538 aa24.25■■□□□ 1.47
Trim47-202ENSMUST00000106441 Cep170bQ80U49 1574 aa24.24■■□□□ 1.47
Trim47-202ENSMUST00000106441 Pola1P33609 1465 aa24.24■■□□□ 1.47
Trim47-202ENSMUST00000106441 Nrxn3Q6P9K9 1571 aa24.24■■□□□ 1.47
Trim47-202ENSMUST00000106441 Rpgrip1lQ8CG73 1264 aa24.23■■□□□ 1.47
Trim47-202ENSMUST00000106441 Pip4k2bQ80XI4 416 aa24.22■■□□□ 1.47
Trim47-202ENSMUST00000106441 Ipo9Q91YE6 1041 aa24.22■■□□□ 1.47
Trim47-202ENSMUST00000106441 Cps1Q8C196 1500 aa24.22■■□□□ 1.47
Trim47-202ENSMUST00000106441 Plekhg1F6S200 1446 aa24.22■■□□□ 1.47
Trim47-202ENSMUST00000106441 Mak16Q8BGS0 296 aaKnown RBP24.22■■□□□ 1.47
Trim47-202ENSMUST00000106441 Ltbp4Q8K4G1 1666 aa24.22■■□□□ 1.47
Trim47-202ENSMUST00000106441 Itsn2Q9Z0R6 1659 aa24.2■■□□□ 1.46
Trim47-202ENSMUST00000106441 Thsd7aQ69ZU6 1645 aa24.17■■□□□ 1.46
Trim47-202ENSMUST00000106441 Erbb3Q61526 1339 aa24.16■■□□□ 1.46
Trim47-202ENSMUST00000106441 HnrnpmQ9D0E1 729 aaKnown RBP24.16■■□□□ 1.46
Trim47-202ENSMUST00000106441 Zfp444Q3TDV8 331 aaKnown RBP24.15■■□□□ 1.46
Trim47-202ENSMUST00000106441 Slc4a3P16283 1227 aa24.15■■□□□ 1.46
Trim47-202ENSMUST00000106441 Abca14E9Q8F8 1683 aa24.13■■□□□ 1.45
Trim47-202ENSMUST00000106441 Rapgef3Q8VCC8 918 aa24.13■■□□□ 1.45
Trim47-202ENSMUST00000106441 TnikP83510 1323 aa24.13■■□□□ 1.45
Trim47-202ENSMUST00000106441 Prkrip1Q9CWV6 186 aaKnown RBP24.12■■□□□ 1.45
Trim47-202ENSMUST00000106441 Nwd1A6H603 1563 aa24.11■■□□□ 1.45
Trim47-202ENSMUST00000106441 Gm16486A0A1D5RMD1 1434 aa24.11■■□□□ 1.45
Trim47-202ENSMUST00000106441 NeflP08551 543 aa24.11■■□□□ 1.45
Trim47-202ENSMUST00000106441 Kcnh8P59111 1102 aa24.11■■□□□ 1.45
Trim47-202ENSMUST00000106441 CenpjQ569L8 1344 aa24.1■■□□□ 1.45
Trim47-202ENSMUST00000106441 PrxO55103 1391 aa24.09■■□□□ 1.45
Trim47-202ENSMUST00000106441 Atp2b2Q9R0K7 1198 aa24.08■■□□□ 1.45
Trim47-202ENSMUST00000106441 Tns3Q5SSZ5 1440 aa24.07■■□□□ 1.44
Trim47-202ENSMUST00000106441 Tex14Q7M6U3 1450 aa24.07■■□□□ 1.44
Trim47-202ENSMUST00000106441 Rreb1Q3UH06 1700 aaKnown RBP24.06■■□□□ 1.44
Trim47-202ENSMUST00000106441 Sbno1Q689Z5 1390 aa24.06■■□□□ 1.44
Trim47-202ENSMUST00000106441 Q7TT23 1179 aa24.06■■□□□ 1.44
Trim47-202ENSMUST00000106441 Pank3Q8R2W9 370 aa24.06■■□□□ 1.44
Trim47-202ENSMUST00000106441 Usp32F8VPZ3 1604 aa24.06■■□□□ 1.44
Trim47-202ENSMUST00000106441 Ttc41Q692V3 1318 aa24.04■■□□□ 1.44
Trim47-202ENSMUST00000106441 Kif20bQ80WE4 1774 aaKnown RBP24.03■■□□□ 1.44
Trim47-202ENSMUST00000106441 Mbd3Q9Z2D8 285 aaKnown RBP24.02■■□□□ 1.44
Trim47-202ENSMUST00000106441 Tmf1B9EKI3 1091 aa24.01■■□□□ 1.43
Trim47-202ENSMUST00000106441 Zscan10Q3URR7 782 aa24.01■■□□□ 1.43
Trim47-202ENSMUST00000106441 Unc13bQ9Z1N9 1602 aa24■■□□□ 1.43
Trim47-202ENSMUST00000106441 InsrP15208 1372 aa24■■□□□ 1.43
Trim47-202ENSMUST00000106441 D430041D05RikF6ZGR6 1678 aa23.99■■□□□ 1.43
Trim47-202ENSMUST00000106441 Tmem94Q7TSH8 1360 aa23.99■■□□□ 1.43
Trim47-202ENSMUST00000106441 Hsp90aa1P07901 733 aaKnown RBP23.99■■□□□ 1.43
Trim47-202ENSMUST00000106441 Q3UJC8 639 aa23.99■■□□□ 1.43
Trim47-202ENSMUST00000106441 Inpp5dQ9ES52 1191 aa23.98■■□□□ 1.43
Trim47-202ENSMUST00000106441 Gli3Q61602 1583 aa23.97■■□□□ 1.43
Trim47-202ENSMUST00000106441 Pik3c2bE9QAN8 1632 aa23.96■■□□□ 1.43
Trim47-202ENSMUST00000106441 Col14a1Q80X19 1797 aa23.96■■□□□ 1.43
Trim47-202ENSMUST00000106441 NktrP30415 1453 aa23.95■■□□□ 1.42
Trim47-202ENSMUST00000106441 Cdk19Q8BWD8 501 aa23.95■■□□□ 1.42
Trim47-202ENSMUST00000106441 NalcnQ8BXR5 1738 aa23.94■■□□□ 1.42
Trim47-202ENSMUST00000106441 Col18a1P39061 1774 aa23.93■■□□□ 1.42
Trim47-202ENSMUST00000106441 Rad21Q61550 635 aaKnown RBP23.92■■□□□ 1.42
Trim47-202ENSMUST00000106441 Exosc9Q9JHI7 438 aaKnown RBP23.92■■□□□ 1.42
Trim47-202ENSMUST00000106441 Gsto1O09131 240 aa23.92■■□□□ 1.42
Trim47-202ENSMUST00000106441 Atf7ipQ7TT18 1306 aa23.92■■□□□ 1.42
Trim47-202ENSMUST00000106441 C5P06684 1680 aa23.91■■□□□ 1.42
Trim47-202ENSMUST00000106441 C3P01027 1663 aa23.9■■□□□ 1.42
Trim47-202ENSMUST00000106441 Slc4a1apE9PX68 744 aa23.89■■□□□ 1.42
Trim47-202ENSMUST00000106441 Gm10563F6WIE4 79 aa23.89■■□□□ 1.41
Trim47-202ENSMUST00000106441 Cnga1P29974 684 aa23.89■■□□□ 1.41
Trim47-202ENSMUST00000106441 Rab3gap2Q8BMG7 1366 aa23.88■■□□□ 1.41
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms