RNA–Protein interactions for RNA: ENSMUST00000101326.9

Ebf1-202, Transcript of Transcription factor COE1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf1, Length 3,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1-202ENSMUST00000101326 Nsfl1cQ9CZ44 370 aaKnown RBP16.57■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Srpk2O54781 681 aaKnown RBP16.57■□□□□ 0.24
Ebf1-202ENSMUST00000101326 NgefQ8CHT1 710 aa16.57■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Kif2cQ922S8 721 aa16.57■□□□□ 0.24
Ebf1-202ENSMUST00000101326 GsdmaQ9EST1 446 aa16.57■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Trim44Q9QXA7 346 aa16.57■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Fam208aQ69ZR9 1610 aaKnown RBP16.56■□□□□ 0.24
Ebf1-202ENSMUST00000101326 AU019823E9PUQ3 292 aa16.56■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Ecm2Q5FW85 670 aa16.56■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Atl3Q91YH5 541 aa16.55■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Zfp777B9EKF4 885 aa16.55■□□□□ 0.24
Ebf1-202ENSMUST00000101326 P2rx7Q9Z1M0 595 aa16.55■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Phlpp2Q8BXA7 1320 aa16.55■□□□□ 0.24
Ebf1-202ENSMUST00000101326 U2af1Q9D883 239 aaKnown RBP16.54■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Map4k4P97820 1233 aaKnown RBP16.53■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Aplp1Q03157 653 aa16.53■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Rrp12Q6P5B0 1295 aaKnown RBP16.53■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Neo1P97798 1493 aa16.53■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Cog6Q8R3I3 657 aa16.53■□□□□ 0.24
Ebf1-202ENSMUST00000101326 Cep170Q6A065 1588 aa16.52■□□□□ 0.24
Ebf1-202ENSMUST00000101326 PogkQ80TC5 607 aa16.52■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Fancd2Q80V62 1450 aa16.52■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Fam135bQ9DAI6 1403 aa16.52■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Ccar1Q8CH18 1146 aaKnown RBP16.51■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Kif18aQ91WD7 886 aa16.51■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Myom2Q14BI5 1463 aa16.5■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Abcc6Q9R1S7 1498 aa16.5■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Zcchc11B2RX14 1644 aaKnown RBP16.5■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Map7O88735 730 aa16.5■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Nutm1Q8BHP2 1126 aa16.5■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Pola1P33609 1465 aa16.5■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Ddit3P35639 168 aa16.5■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Kdm5aQ3UXZ9 1690 aa16.49■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Mast1Q9R1L5 1570 aa16.49■□□□□ 0.23
Ebf1-202ENSMUST00000101326 GorabQ8BRM2 368 aa16.49■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Dmrtc1Q9D9R7 182 aa16.48■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Tsen2Q6P7W5 460 aa16.48■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Nsd2Q8BVE8 1365 aa16.47■□□□□ 0.23
Ebf1-202ENSMUST00000101326 AI481877A2ALV5 1481 aa16.46■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Maco1Q7TQE6 664 aaKnown RBP16.46■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Tfip11Q9ERA6 838 aaKnown RBP16.46■□□□□ 0.23
Ebf1-202ENSMUST00000101326 Dusp27Q148W8 1138 aa16.45■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Rsph3aQ3UFY4 516 aa16.45■□□□□ 0.22
Ebf1-202ENSMUST00000101326 IbtkQ6ZPR6 1352 aaKnown RBP16.45■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Gm32742A0A1B0GT42 1604 aa16.45■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Rbm10Q99KG3 930 aaKnown RBP16.45■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Pbrm1Q8BSQ9 1634 aaKnown RBP16.44■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Prdm16A2A935 1275 aa16.44■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Kif3bQ61771 747 aa16.44■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Ccdc60Q8C4J0 545 aa16.44■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Senp3Q9EP97 568 aaKnown RBP16.44■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Cald1E9QA15 768 aaKnown RBP16.43■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Itsn2Q9Z0R6 1659 aa16.42■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Stag3O70576 1240 aa16.42■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Nectin2P32507 530 aa16.42■□□□□ 0.22
Ebf1-202ENSMUST00000101326 SkilQ60665 675 aa16.42■□□□□ 0.22
Ebf1-202ENSMUST00000101326 IbspQ61711 324 aa16.42■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Erich6bQ9D4S6 220 aa16.42■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Stk11ipQ3TAA7 1072 aa16.41■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Puf60Q3UEB3 564 aaKnown RBP16.41■□□□□ 0.22
Ebf1-202ENSMUST00000101326 KnstrnQ9D9Z1 312 aaKnown RBP16.41■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Tmco5bQ80X59 307 aa16.4■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Gprasp1Q5U4C1 1347 aa16.4■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Ddrgk1Q80WW9 315 aa16.4■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Rusc2Q80U22 1514 aa16.4■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Stard8Q8K031 1019 aa16.39■□□□□ 0.22
Ebf1-202ENSMUST00000101326 Robo2Q7TPD3 1470 aa16.39■□□□□ 0.21
Ebf1-202ENSMUST00000101326 ErbinQ80TH2 1402 aa16.39■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Rbm25B2RY56 838 aaKnown RBP16.39■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Dhx16G3X8X0 1044 aaKnown RBP16.39■□□□□ 0.21
Ebf1-202ENSMUST00000101326 AnkarA2RT91 1465 aa16.39■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Gm10093D3YYI8 482 aa16.38■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Hdac1O09106 482 aaKnown RBP16.38■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Pdia4P08003 638 aaKnown RBP16.38■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Scaf11E9PZM7 1456 aaKnown RBP16.38■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Iqsec2Q5DU25 1478 aa16.38■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Usp54Q8BL06 1588 aaKnown RBP16.37■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Brd1E9PZ26 1189 aaKnown RBP16.37■□□□□ 0.21
Ebf1-202ENSMUST00000101326 CastP51125 788 aa16.37■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Isy1Q69ZQ2 285 aaKnown RBP16.36■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Nek4Q9Z1J2 792 aa16.36■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Cdc42bpbQ7TT50 1713 aa16.36■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Cfap74Q3UY96 1578 aa16.36■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Kif1bQ60575 1816 aaKnown RBP16.36■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Myo3aQ8K3H5 1613 aa16.35■□□□□ 0.21
Ebf1-202ENSMUST00000101326 PtmaP26350 111 aa16.35■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Myom1Q62234 1667 aaKnown RBP16.35■□□□□ 0.21
Ebf1-202ENSMUST00000101326 G3bp1P97855 465 aaKnown RBP16.35■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Clcn1Q64347 994 aa16.35■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Zranb1Q7M760 708 aa16.35■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Irf5P56477 497 aa16.34■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Bloc1s4Q8VED2 215 aa16.34■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Erbb4Q61527 1308 aa16.34■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Tpm2P58774 284 aa16.33■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Hs1bp3Q3TC93 395 aa16.33■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Tbc1d9Q3UYK3 1264 aa16.33■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Ttc21bQ0HA38 1315 aa16.33■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Nphp4P59240 1425 aa16.33■□□□□ 0.21
Ebf1-202ENSMUST00000101326 Ccdc146E9Q9F7 977 aa16.33■□□□□ 0.2
Ebf1-202ENSMUST00000101326 Abcc1O35379 1528 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms