RNA–Protein interactions for RNA: ENSMUST00000055006.11

Trim16-201, Transcript of Tripartite motif-containing protein 16, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim16, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16-201ENSMUST00000055006 Ssh1Q76I79 1042 aa9.84□□□□□ -0.83
Trim16-201ENSMUST00000055006 Rtn4Q99P72 1162 aaKnown RBP9.84□□□□□ -0.83
Trim16-201ENSMUST00000055006 Taok2Q6ZQ29 1240 aa9.83□□□□□ -0.84
Trim16-201ENSMUST00000055006 Stard8Q8K031 1019 aa9.83□□□□□ -0.84
Trim16-201ENSMUST00000055006 Tmc1Q8R4P5 757 aa9.83□□□□□ -0.84
Trim16-201ENSMUST00000055006 Tulp4Q9JIL5 1547 aa9.83□□□□□ -0.84
Trim16-201ENSMUST00000055006 Catsper2A2ARP9 588 aa9.83□□□□□ -0.84
Trim16-201ENSMUST00000055006 Rrbp1Q99PL5 1605 aaKnown RBP9.83□□□□□ -0.84
Trim16-201ENSMUST00000055006 Nectin2P32507 530 aa9.83□□□□□ -0.84
Trim16-201ENSMUST00000055006 Dusp27Q148W8 1138 aa9.83□□□□□ -0.84
Trim16-201ENSMUST00000055006 Tubgcp6G5E8P0 1769 aa9.83□□□□□ -0.84
Trim16-201ENSMUST00000055006 Ppip5k1A2ARP1 1436 aa9.82□□□□□ -0.84
Trim16-201ENSMUST00000055006 Trim44Q9QXA7 346 aa9.82□□□□□ -0.84
Trim16-201ENSMUST00000055006 Abcc6Q9R1S7 1498 aa9.82□□□□□ -0.84
Trim16-201ENSMUST00000055006 Map4k4P97820 1233 aaKnown RBP9.82□□□□□ -0.84
Trim16-201ENSMUST00000055006 Atl3Q91YH5 541 aa9.82□□□□□ -0.84
Trim16-201ENSMUST00000055006 Cald1E9QA15 768 aaKnown RBP9.82□□□□□ -0.84
Trim16-201ENSMUST00000055006 Pdlim2Q8R1G6 349 aa9.82□□□□□ -0.84
Trim16-201ENSMUST00000055006 Col17a1Q07563 1470 aa9.81□□□□□ -0.84
Trim16-201ENSMUST00000055006 Cog6Q8R3I3 657 aa9.81□□□□□ -0.84
Trim16-201ENSMUST00000055006 Aplp1Q03157 653 aa9.81□□□□□ -0.84
Trim16-201ENSMUST00000055006 Tbc1d32Q3URV1 1296 aa9.81□□□□□ -0.84
Trim16-201ENSMUST00000055006 Mcm4P49717 862 aa9.81□□□□□ -0.84
Trim16-201ENSMUST00000055006 Zranb1Q7M760 708 aa9.81□□□□□ -0.84
Trim16-201ENSMUST00000055006 Ttc21bQ0HA38 1315 aa9.81□□□□□ -0.84
Trim16-201ENSMUST00000055006 Zmym3Q9JLM4 1370 aa9.8□□□□□ -0.84
Trim16-201ENSMUST00000055006 Lemd3Q9WU40 921 aa9.8□□□□□ -0.84
Trim16-201ENSMUST00000055006 AU019823E9PUQ3 292 aa9.8□□□□□ -0.84
Trim16-201ENSMUST00000055006 Kif18aQ91WD7 886 aa9.8□□□□□ -0.84
Trim16-201ENSMUST00000055006 P2rx7Q9Z1M0 595 aa9.8□□□□□ -0.84
Trim16-201ENSMUST00000055006 Gm14025A2AP89 1413 aa9.8□□□□□ -0.84
Trim16-201ENSMUST00000055006 Paxip1Q6NZQ4 1056 aa9.8□□□□□ -0.84
Trim16-201ENSMUST00000055006 Mast1Q9R1L5 1570 aa9.8□□□□□ -0.84
Trim16-201ENSMUST00000055006 Kcnn1Q9EQR3 537 aa9.79□□□□□ -0.84
Trim16-201ENSMUST00000055006 Pbrm1Q8BSQ9 1634 aaKnown RBP9.79□□□□□ -0.84
Trim16-201ENSMUST00000055006 Maco1Q7TQE6 664 aaKnown RBP9.79□□□□□ -0.84
Trim16-201ENSMUST00000055006 KnstrnQ9D9Z1 312 aaKnown RBP9.79□□□□□ -0.84
Trim16-201ENSMUST00000055006 Fgd6Q69ZL1 1399 aa9.79□□□□□ -0.84
Trim16-201ENSMUST00000055006 Gtf2a1Q99PM3 378 aa9.79□□□□□ -0.84
Trim16-201ENSMUST00000055006 Clasp1Q80TV8 1535 aaKnown RBP9.78□□□□□ -0.84
Trim16-201ENSMUST00000055006 Il4rP16382 810 aa9.78□□□□□ -0.84
Trim16-201ENSMUST00000055006 Phf14Q9D4H9 881 aa9.78□□□□□ -0.84
Trim16-201ENSMUST00000055006 Znf521Q6KAS7 1311 aa9.78□□□□□ -0.84
Trim16-201ENSMUST00000055006 Terf2O35144 541 aa9.78□□□□□ -0.84
Trim16-201ENSMUST00000055006 G3bp1P97855 465 aaKnown RBP9.78□□□□□ -0.84
Trim16-201ENSMUST00000055006 Plin1Q8CGN5 517 aa9.78□□□□□ -0.84
Trim16-201ENSMUST00000055006 Stk11ipQ3TAA7 1072 aa9.77□□□□□ -0.84
Trim16-201ENSMUST00000055006 Rbm25B2RY56 838 aaKnown RBP9.77□□□□□ -0.85
Trim16-201ENSMUST00000055006 Phlpp2Q8BXA7 1320 aa9.77□□□□□ -0.85
Trim16-201ENSMUST00000055006 SkilQ60665 675 aa9.76□□□□□ -0.85
Trim16-201ENSMUST00000055006 4933402E13RikQ9D4D2 429 aa9.76□□□□□ -0.85
Trim16-201ENSMUST00000055006 Tfip11Q9ERA6 838 aaKnown RBP9.76□□□□□ -0.85
Trim16-201ENSMUST00000055006 IbtkQ6ZPR6 1352 aaKnown RBP9.76□□□□□ -0.85
Trim16-201ENSMUST00000055006 Cep170Q6A065 1588 aa9.76□□□□□ -0.85
Trim16-201ENSMUST00000055006 Antxr1Q9CZ52 562 aa9.76□□□□□ -0.85
Trim16-201ENSMUST00000055006 AampJ3QN89 436 aa9.75□□□□□ -0.85
Trim16-201ENSMUST00000055006 Nsfl1cQ9CZ44 370 aaKnown RBP9.75□□□□□ -0.85
Trim16-201ENSMUST00000055006 Atp10dQ8K2X1 1416 aa9.75□□□□□ -0.85
Trim16-201ENSMUST00000055006 CenpjQ569L8 1344 aa9.75□□□□□ -0.85
Trim16-201ENSMUST00000055006 Fam135bQ9DAI6 1403 aa9.75□□□□□ -0.85
Trim16-201ENSMUST00000055006 Ccdc146E9Q9F7 977 aa9.75□□□□□ -0.85
Trim16-201ENSMUST00000055006 Rsph3aQ3UFY4 516 aa9.75□□□□□ -0.85
Trim16-201ENSMUST00000055006 U2surpQ6NV83 1029 aaKnown RBP9.75□□□□□ -0.85
Trim16-201ENSMUST00000055006 Kdm5aQ3UXZ9 1690 aa9.74□□□□□ -0.85
Trim16-201ENSMUST00000055006 Gm32742A0A1B0GT42 1604 aa9.74□□□□□ -0.85
Trim16-201ENSMUST00000055006 1700019A02RikA0A087WPV9 146 aa9.74□□□□□ -0.85
Trim16-201ENSMUST00000055006 Nek4Q9Z1J2 792 aa9.74□□□□□ -0.85
Trim16-201ENSMUST00000055006 Usp54Q8BL06 1588 aaKnown RBP9.74□□□□□ -0.85
Trim16-201ENSMUST00000055006 Birc3O08863 600 aa9.74□□□□□ -0.85
Trim16-201ENSMUST00000055006 Zcchc11B2RX14 1644 aaKnown RBP9.73□□□□□ -0.85
Trim16-201ENSMUST00000055006 Erich6bQ9D4S6 220 aa9.73□□□□□ -0.85
Trim16-201ENSMUST00000055006 Kif1bQ60575 1816 aaKnown RBP9.73□□□□□ -0.85
Trim16-201ENSMUST00000055006 PtmaP26350 111 aa9.73□□□□□ -0.85
Trim16-201ENSMUST00000055006 CastP51125 788 aa9.73□□□□□ -0.85
Trim16-201ENSMUST00000055006 Rrp9Q91WM3 475 aaKnown RBP9.73□□□□□ -0.85
Trim16-201ENSMUST00000055006 Dnmt1P13864 1620 aaKnown RBP9.72□□□□□ -0.85
Trim16-201ENSMUST00000055006 Cfap74Q3UY96 1578 aa9.72□□□□□ -0.85
Trim16-201ENSMUST00000055006 Pola1P33609 1465 aa9.72□□□□□ -0.85
Trim16-201ENSMUST00000055006 AatkQ80YE4 1365 aa9.72□□□□□ -0.85
Trim16-201ENSMUST00000055006 Cavin4A2AMM0 362 aa9.72□□□□□ -0.85
Trim16-201ENSMUST00000055006 Dmrtc1Q9D9R7 182 aa9.71□□□□□ -0.85
Trim16-201ENSMUST00000055006 Scaf11E9PZM7 1456 aaKnown RBP9.71□□□□□ -0.86
Trim16-201ENSMUST00000055006 Znf316Q6PGE4 1016 aa9.71□□□□□ -0.86
Trim16-201ENSMUST00000055006 Myo3aQ8K3H5 1613 aa9.71□□□□□ -0.86
Trim16-201ENSMUST00000055006 Nphp4P59240 1425 aa9.71□□□□□ -0.86
Trim16-201ENSMUST00000055006 Myom2Q14BI5 1463 aa9.71□□□□□ -0.86
Trim16-201ENSMUST00000055006 Rrp12Q6P5B0 1295 aaKnown RBP9.71□□□□□ -0.86
Trim16-201ENSMUST00000055006 Kif2cQ922S8 721 aa9.71□□□□□ -0.86
Trim16-201ENSMUST00000055006 Kif20aP97329 887 aa9.7□□□□□ -0.86
Trim16-201ENSMUST00000055006 Gprasp1Q5U4C1 1347 aa9.7□□□□□ -0.86
Trim16-201ENSMUST00000055006 Shq1Q7TMX5 569 aa9.7□□□□□ -0.86
Trim16-201ENSMUST00000055006 Cdc42bpbQ7TT50 1713 aa9.7□□□□□ -0.86
Trim16-201ENSMUST00000055006 AnkarA2RT91 1465 aa9.69□□□□□ -0.86
Trim16-201ENSMUST00000055006 Swt1Q9DBQ9 907 aa9.69□□□□□ -0.86
Trim16-201ENSMUST00000055006 Brd1E9PZ26 1189 aaKnown RBP9.68□□□□□ -0.86
Trim16-201ENSMUST00000055006 Pibf1E9Q6K3 756 aa9.68□□□□□ -0.86
Trim16-201ENSMUST00000055006 Q3UPC7 1272 aa9.68□□□□□ -0.86
Trim16-201ENSMUST00000055006 Chmp4cQ9D7F7 232 aa9.68□□□□□ -0.86
Trim16-201ENSMUST00000055006 PalmQ9Z0P4 383 aa9.68□□□□□ -0.86
Trim16-201ENSMUST00000055006 Rnf17Q99MV7 1640 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 51.4 ms