RNA–Protein interactions for RNA: ENSMUST00000055006.11

Trim16-201, Transcript of Tripartite motif-containing protein 16, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim16, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16-201ENSMUST00000055006 NischQ80TM9 1593 aa13.9□□□□□ -0.18
Trim16-201ENSMUST00000055006 Rhox8Q6VSS7 320 aa13.77□□□□□ -0.21
Trim16-201ENSMUST00000055006 Abcc9P70170 1546 aa13.38□□□□□ -0.27
Trim16-201ENSMUST00000055006 Gm35339A0A140LHH9 1649 aa13.24□□□□□ -0.29
Trim16-201ENSMUST00000055006 Rpgrip1Q9EPQ2 1331 aa13.05□□□□□ -0.32
Trim16-201ENSMUST00000055006 Abcc8B2RUS7 1588 aa13.03□□□□□ -0.32
Trim16-201ENSMUST00000055006 Rtl1Q7M732 1744 aa13.03□□□□□ -0.32
Trim16-201ENSMUST00000055006 Ehmt2Q9Z148 1263 aaKnown RBP13□□□□□ -0.33
Trim16-201ENSMUST00000055006 Ccdc180J3QNE4 1664 aa13□□□□□ -0.33
Trim16-201ENSMUST00000055006 Acin1Q9JIX8 1338 aaKnown RBP12.78□□□□□ -0.36
Trim16-201ENSMUST00000055006 Ccdc136Q3TVA9 1136 aa12.7□□□□□ -0.38
Trim16-201ENSMUST00000055006 Zcchc6Q5BLK4 1491 aaKnown RBP12.56□□□□□ -0.4
Trim16-201ENSMUST00000055006 HrcG5E8J6 738 aa12.52□□□□□ -0.41
Trim16-201ENSMUST00000055006 Pcgf6Q99NA9 353 aa12.51□□□□□ -0.41
Trim16-201ENSMUST00000055006 Trim41Q5NCC3 630 aa12.44□□□□□ -0.42
Trim16-201ENSMUST00000055006 Dcaf1Q80TR8 1506 aa12.35□□□□□ -0.43
Trim16-201ENSMUST00000055006 Supt5hO55201 1082 aaKnown RBP12.28□□□□□ -0.44
Trim16-201ENSMUST00000055006 Zeb1Q64318 1117 aa12.21□□□□□ -0.46
Trim16-201ENSMUST00000055006 Rb1cc1Q9ESK9 1588 aa12.2□□□□□ -0.46
Trim16-201ENSMUST00000055006 Gab3Q8BSM5 595 aa12.2□□□□□ -0.46
Trim16-201ENSMUST00000055006 Cngb1E1AZ71 1325 aa12.13□□□□□ -0.47
Trim16-201ENSMUST00000055006 Neurod1Q60867 357 aa12.04□□□□□ -0.48
Trim16-201ENSMUST00000055006 Cep164Q5DU05 1446 aa12.01□□□□□ -0.49
Trim16-201ENSMUST00000055006 Baz1aO88379 1555 aa12□□□□□ -0.49
Trim16-201ENSMUST00000055006 ScribQ80U72 1612 aa11.99□□□□□ -0.49
Trim16-201ENSMUST00000055006 Chic1Q8CBW7 227 aa11.97□□□□□ -0.49
Trim16-201ENSMUST00000055006 Mier1Q5UAK0 511 aa11.93□□□□□ -0.5
Trim16-201ENSMUST00000055006 NefmP08553 848 aa11.93□□□□□ -0.5
Trim16-201ENSMUST00000055006 Kdm5dQ62240 1548 aa11.91□□□□□ -0.5
Trim16-201ENSMUST00000055006 Wdr66E9Q743 1299 aa11.88□□□□□ -0.51
Trim16-201ENSMUST00000055006 Las1lA2BE28 776 aaKnown RBP11.87□□□□□ -0.51
Trim16-201ENSMUST00000055006 Sall2Q9QX96 1004 aa11.87□□□□□ -0.51
Trim16-201ENSMUST00000055006 Esf1Q3V1V3 845 aaKnown RBP11.84□□□□□ -0.51
Trim16-201ENSMUST00000055006 UbtfP25976 765 aaKnown RBP11.82□□□□□ -0.52
Trim16-201ENSMUST00000055006 Rsf1E9PWW9 1441 aaKnown RBP11.82□□□□□ -0.52
Trim16-201ENSMUST00000055006 Ppargc1bQ8VHJ7 1014 aa11.78□□□□□ -0.52
Trim16-201ENSMUST00000055006 NacadQ5SWP3 1504 aa11.76□□□□□ -0.53
Trim16-201ENSMUST00000055006 Smarca2Q6DIC0 1577 aa11.71□□□□□ -0.53
Trim16-201ENSMUST00000055006 Myt1lP97500 1187 aa11.7□□□□□ -0.54
Trim16-201ENSMUST00000055006 Ccdc88bQ4QRL3 1481 aa11.7□□□□□ -0.54
Trim16-201ENSMUST00000055006 Csrnp3P59055 597 aa11.69□□□□□ -0.54
Trim16-201ENSMUST00000055006 Aebp2Q9Z248 504 aaKnown RBP11.65□□□□□ -0.54
Trim16-201ENSMUST00000055006 Brd4Q9ESU6 1400 aaKnown RBP11.65□□□□□ -0.55
Trim16-201ENSMUST00000055006 Anks4bQ8K3X6 423 aa11.64□□□□□ -0.55
Trim16-201ENSMUST00000055006 1700123L14RikQ3V2K7 440 aa11.64□□□□□ -0.55
Trim16-201ENSMUST00000055006 Cdk11bP24788 784 aaKnown RBP11.63□□□□□ -0.55
Trim16-201ENSMUST00000055006 Nop58Q6DFW4 536 aaKnown RBP11.62□□□□□ -0.55
Trim16-201ENSMUST00000055006 Golga3P55937 1487 aa11.6□□□□□ -0.55
Trim16-201ENSMUST00000055006 Crybg2B7ZCC2 1516 aa11.57□□□□□ -0.56
Trim16-201ENSMUST00000055006 Npm2Q80W85 207 aa11.55□□□□□ -0.56
Trim16-201ENSMUST00000055006 Cecr2E9Q2Z1 1453 aa11.55□□□□□ -0.56
Trim16-201ENSMUST00000055006 Gm38655A0A286YDK6 273 aa11.54□□□□□ -0.56
Trim16-201ENSMUST00000055006 ClspnQ80YR7 1315 aa11.53□□□□□ -0.56
Trim16-201ENSMUST00000055006 TonslQ6NZL6 1363 aa11.5□□□□□ -0.57
Trim16-201ENSMUST00000055006 Plekhg3Q4VAC9 1341 aa11.47□□□□□ -0.57
Trim16-201ENSMUST00000055006 CenpbP27790 599 aa11.47□□□□□ -0.57
Trim16-201ENSMUST00000055006 Sycp2Q9CUU3 1500 aa11.47□□□□□ -0.57
Trim16-201ENSMUST00000055006 Synj1Q8CHC4 1574 aa11.45□□□□□ -0.58
Trim16-201ENSMUST00000055006 Aplp2Q06335 707 aa11.4□□□□□ -0.59
Trim16-201ENSMUST00000055006 Eid3Q3V124 375 aa11.37□□□□□ -0.59
Trim16-201ENSMUST00000055006 Ap3b1Q9Z1T1 1105 aa11.36□□□□□ -0.59
Trim16-201ENSMUST00000055006 CftrP26361 1476 aa11.36□□□□□ -0.59
Trim16-201ENSMUST00000055006 Clip1Q922J3 1391 aa11.34□□□□□ -0.59
Trim16-201ENSMUST00000055006 Mapk8ip2Q9ERE9 830 aa11.31□□□□□ -0.6
Trim16-201ENSMUST00000055006 Cep162Q6ZQ06 1403 aa11.29□□□□□ -0.6
Trim16-201ENSMUST00000055006 Rapgef2Q8CHG7 1496 aa11.28□□□□□ -0.6
Trim16-201ENSMUST00000055006 Il27Q8K3I6 234 aa11.26□□□□□ -0.61
Trim16-201ENSMUST00000055006 Cc2d2aQ8CFW7 1633 aa11.25□□□□□ -0.61
Trim16-201ENSMUST00000055006 Myt1Q8CFC2 1127 aa11.23□□□□□ -0.61
Trim16-201ENSMUST00000055006 Top2bQ64511 1612 aa11.22□□□□□ -0.61
Trim16-201ENSMUST00000055006 SafbD3YXK2 937 aaKnown RBP11.22□□□□□ -0.61
Trim16-201ENSMUST00000055006 Hnrnpul2Q00PI9 745 aaKnown RBP11.21□□□□□ -0.62
Trim16-201ENSMUST00000055006 Fmn1Q05860 1466 aa11.19□□□□□ -0.62
Trim16-201ENSMUST00000055006 BicraF8VPZ9 1578 aa11.18□□□□□ -0.62
Trim16-201ENSMUST00000055006 Fam50aQ9WV03 339 aaKnown RBP11.18□□□□□ -0.62
Trim16-201ENSMUST00000055006 Cttnbp2B9EJA2 1648 aa11.17□□□□□ -0.62
Trim16-201ENSMUST00000055006 NclP09405 707 aaKnown RBP11.17□□□□□ -0.62
Trim16-201ENSMUST00000055006 Tnnt3Q9QZ47 272 aa11.16□□□□□ -0.62
Trim16-201ENSMUST00000055006 Fam71e1A1L3C1 212 aa11.15□□□□□ -0.63
Trim16-201ENSMUST00000055006 Slc24a1Q91WD8 1130 aa11.13□□□□□ -0.63
Trim16-201ENSMUST00000055006 Top2aQ01320 1528 aaKnown RBP11.12□□□□□ -0.63
Trim16-201ENSMUST00000055006 Lmod2Q3UHZ5 550 aa11.1□□□□□ -0.63
Trim16-201ENSMUST00000055006 Ube2uB1AUC4 352 aa11.09□□□□□ -0.63
Trim16-201ENSMUST00000055006 Ncapd3Q6ZQK0 1506 aa11.09□□□□□ -0.63
Trim16-201ENSMUST00000055006 Setd5Q5XJV7 1441 aa11.07□□□□□ -0.64
Trim16-201ENSMUST00000055006 Smarca4Q3TKT4 1613 aaKnown RBP11.06□□□□□ -0.64
Trim16-201ENSMUST00000055006 Eea1Q8BL66 1411 aa11.06□□□□□ -0.64
Trim16-201ENSMUST00000055006 Stra8P70278 393 aa11.05□□□□□ -0.64
Trim16-201ENSMUST00000055006 BlmO88700 1416 aa11.02□□□□□ -0.64
Trim16-201ENSMUST00000055006 Anp32aO35381 247 aa10.99□□□□□ -0.65
Trim16-201ENSMUST00000055006 Arap1Q4LDD4 1452 aa10.97□□□□□ -0.65
Trim16-201ENSMUST00000055006 Eif5bQ05D44 1216 aaKnown RBP10.96□□□□□ -0.65
Trim16-201ENSMUST00000055006 DiexfQ8BTT6 772 aaKnown RBP10.96□□□□□ -0.66
Trim16-201ENSMUST00000055006 Arhgap35Q91YM2 1499 aa10.96□□□□□ -0.66
Trim16-201ENSMUST00000055006 Hspa5P20029 655 aaKnown RBP10.95□□□□□ -0.66
Trim16-201ENSMUST00000055006 PtprkP35822 1457 aa10.95□□□□□ -0.66
Trim16-201ENSMUST00000055006 Calr4Q3TQS0 420 aa10.94□□□□□ -0.66
Trim16-201ENSMUST00000055006 Baz1bQ9Z277 1479 aa10.94□□□□□ -0.66
Trim16-201ENSMUST00000055006 Znf710Q3U288 666 aa10.92□□□□□ -0.66
Trim16-201ENSMUST00000055006 Ccdc18Q640L5 1455 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 93.2 ms