RNA–Protein interactions for RNA: ENSMUST00000050905.15

Tpm1-203, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-203ENSMUST00000050905 Sipa1l2Q80TE4 1722 aa13.88□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Utp14aQ640M1 767 aaKnown RBP13.88□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Ggt6Q6PDE7 497 aa13.88□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Siglec1Q62230 1695 aa13.88□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Cep170bQ80U49 1574 aa13.88□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Adamts13Q769J6 1426 aa13.87□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Usp32F8VPZ3 1604 aa13.86□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Q3UJC8 639 aa13.86□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Dmrt2Q8BG36 561 aa13.86□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Smim5Q8BT42 78 aa13.86□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Hdac5Q9Z2V6 1113 aa13.86□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Rreb1Q3UH06 1700 aaKnown RBP13.86□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Kdm2aP59997 1161 aa13.85□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Kif20bQ80WE4 1774 aaKnown RBP13.85□□□□□ -0.19
Tpm1-203ENSMUST00000050905 Fan1Q69ZT1 1020 aa13.84□□□□□ -0.19
Tpm1-203ENSMUST00000050905 D430041D05RikF6ZGR6 1678 aa13.82□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Farp2Q91VS8 1065 aa13.82□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Slc52a2Q9D8F3 450 aa13.82□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Rock1P70335 1354 aa13.82□□□□□ -0.2
Tpm1-203ENSMUST00000050905 DccP70211 1447 aa13.81□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Ifit1bl1D3Z6F0 470 aa13.81□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Rgl3Q3UYI5 709 aa13.81□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Kcna6Q61923 529 aa13.81□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Lrrc7Q80TE7 1490 aa13.8□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Puf60Q3UEB3 564 aaKnown RBP13.8□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Srpk2O54781 681 aaKnown RBP13.79□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Os9Q8K2C7 672 aa13.79□□□□□ -0.2
Tpm1-203ENSMUST00000050905 NinlQ6ZQ12 1394 aa13.79□□□□□ -0.2
Tpm1-203ENSMUST00000050905 C5P06684 1680 aa13.79□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Wnk3Q80XP9 1757 aa13.78□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Idi1P58044 227 aa13.78□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Sox12Q04890 314 aa13.78□□□□□ -0.2
Tpm1-203ENSMUST00000050905 N4bp2F8VQG7 1678 aaKnown RBP13.78□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Marf1Q8BJ34 1730 aaKnown RBP13.78□□□□□ -0.2
Tpm1-203ENSMUST00000050905 Ildr2B5TVM2 661 aa13.77□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Ccer2J3QPU5 274 aa13.77□□□□□ -0.21
Tpm1-203ENSMUST00000050905 MpndQ3TV65 487 aa13.77□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Zranb1Q7M760 708 aa13.77□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Als2Q920R0 1651 aa13.77□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Abcc10Q8R4P9 1501 aa13.76□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Usp47Q8BY87 1376 aa13.76□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Eno4Q8C042 619 aa13.75□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Acsbg1Q99PU5 721 aa13.75□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Rgs17Q9QZB0 210 aa13.75□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Cdk5rap2Q8K389 1822 aa13.75□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Tmem2Q5FWI3 1383 aa13.74□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Gm20521D3Z5F7 333 aa13.74□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Eid3Q3V124 375 aa13.74□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Grwd1Q810D6 446 aaKnown RBP13.74□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Tex14Q7M6U3 1450 aa13.74□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Cep152A2AUM9 1736 aaKnown RBP13.73□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Camta1A2A891 1682 aa13.73□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Abca14E9Q8F8 1683 aa13.72□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Ddx54Q8K4L0 874 aaKnown RBP13.72□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Plekhg1F6S200 1446 aa13.72□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Mink1Q9JM52 1308 aa13.71□□□□□ -0.21
Tpm1-203ENSMUST00000050905 NgefQ8CHT1 710 aa13.71□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Atp2b2Q9R0K7 1198 aa13.71□□□□□ -0.21
Tpm1-203ENSMUST00000050905 Arhgef1Q61210 920 aaKnown RBP13.7□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Emilin2Q8K482 1074 aa13.7□□□□□ -0.22
Tpm1-203ENSMUST00000050905 PtpruB1AUH1 1446 aa13.7□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Fam135bQ9DAI6 1403 aa13.69□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Kif1aP33173 1695 aa13.69□□□□□ -0.22
Tpm1-203ENSMUST00000050905 RalgapbQ8BQZ4 1484 aa13.67□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Hspa5P20029 655 aaKnown RBP13.67□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Znf316Q6PGE4 1016 aa13.67□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Atp7bQ64446 1462 aa13.67□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Stag3O70576 1240 aa13.66□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Slc35g1Q8BY79 368 aa13.66□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Sipa1l1Q8C0T5 1782 aa13.66□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Wdr17E9Q271 1322 aa13.65□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Usp40Q8BWR4 1235 aa13.65□□□□□ -0.22
Tpm1-203ENSMUST00000050905 IqubQ8CDK3 788 aa13.65□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Lrrc59Q922Q8 307 aaKnown RBP13.65□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Atp10bB1AWN4 1474 aa13.65□□□□□ -0.22
Tpm1-203ENSMUST00000050905 Acin1Q9JIX8 1338 aaKnown RBP13.64□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Psrc1Q9D0P7 329 aa13.64□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Mier1Q5UAK0 511 aa13.63□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Sgsm1Q8BPQ7 1093 aa13.62□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Abca15E9PWH4 1668 aa13.62□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Neurod1Q60867 357 aa13.61□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Cadps2Q8BYR5 1297 aa13.61□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Ap3b2Q9JME5 1082 aa13.61□□□□□ -0.23
Tpm1-203ENSMUST00000050905 InhbeO08717 350 aa13.6□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Dixdc1Q80Y83 711 aa13.6□□□□□ -0.23
Tpm1-203ENSMUST00000050905 NktrP30415 1453 aa13.6□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Cdk19Q8BWD8 501 aa13.59□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Sirt1Q923E4 737 aa13.59□□□□□ -0.23
Tpm1-203ENSMUST00000050905 Cpsf1Q9EPU4 1441 aaKnown RBP13.58□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Txnrd1Q9JMH6 613 aa13.58□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Zbtb4Q5F293 982 aa13.57□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Nrxn1Q9CS84 1514 aa13.57□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Polr3aB2RXC6 1390 aa13.57□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Nphp4P59240 1425 aa13.56□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Fyb1O35601 819 aa13.56□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Col16a1Q8BLX7 1580 aa13.56□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Cdhr2E9Q7P9 1308 aa13.56□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Tnrc6cQ3UHC0 1690 aaKnown RBP13.56□□□□□ -0.24
Tpm1-203ENSMUST00000050905 Col22a1E9Q7P1 1613 aa13.55□□□□□ -0.24
Tpm1-203ENSMUST00000050905 PaskQ8CEE6 1383 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms