RNA–Protein interactions for RNA: ENSMUST00000050905.15

Tpm1-203, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-203ENSMUST00000050905 Gm35339A0A140LHH9 1649 aa22.11■■□□□ 1.13
Tpm1-203ENSMUST00000050905 NischQ80TM9 1593 aa21.74■■□□□ 1.07
Tpm1-203ENSMUST00000050905 Abcc8B2RUS7 1588 aa21.12■□□□□ 0.97
Tpm1-203ENSMUST00000050905 Abcc9P70170 1546 aa21.03■□□□□ 0.96
Tpm1-203ENSMUST00000050905 ScribQ80U72 1612 aa20.56■□□□□ 0.88
Tpm1-203ENSMUST00000050905 Kdm5dQ62240 1548 aa19.79■□□□□ 0.76
Tpm1-203ENSMUST00000050905 NacadQ5SWP3 1504 aa19.78■□□□□ 0.76
Tpm1-203ENSMUST00000050905 Sycp2Q9CUU3 1500 aa19.45■□□□□ 0.7
Tpm1-203ENSMUST00000050905 Dcaf1Q80TR8 1506 aa19.32■□□□□ 0.68
Tpm1-203ENSMUST00000050905 BicraF8VPZ9 1578 aa19.27■□□□□ 0.67
Tpm1-203ENSMUST00000050905 Dnajc5bQ9CQ94 199 aa19.2■□□□□ 0.66
Tpm1-203ENSMUST00000050905 Mapk8ip2Q9ERE9 830 aa19.09■□□□□ 0.65
Tpm1-203ENSMUST00000050905 Rb1cc1Q9ESK9 1588 aa18.94■□□□□ 0.62
Tpm1-203ENSMUST00000050905 Thoc2B1AZI6 1594 aaKnown RBP18.68■□□□□ 0.58
Tpm1-203ENSMUST00000050905 Pds5bQ4VA53 1446 aaKnown RBP18.67■□□□□ 0.58
Tpm1-203ENSMUST00000050905 Baz1aO88379 1555 aa18.63■□□□□ 0.57
Tpm1-203ENSMUST00000050905 Rhox8Q6VSS7 320 aa18.58■□□□□ 0.56
Tpm1-203ENSMUST00000050905 Crybg2B7ZCC2 1516 aa18.52■□□□□ 0.56
Tpm1-203ENSMUST00000050905 Atad2bE9Q166 1460 aaKnown RBP18.47■□□□□ 0.55
Tpm1-203ENSMUST00000050905 Ccdc180J3QNE4 1664 aa18.47■□□□□ 0.55
Tpm1-203ENSMUST00000050905 Zcchc6Q5BLK4 1491 aaKnown RBP18.45■□□□□ 0.54
Tpm1-203ENSMUST00000050905 Cc2d2aQ8CFW7 1633 aa18.37■□□□□ 0.53
Tpm1-203ENSMUST00000050905 Ercc6F8VPZ5 1481 aa18.28■□□□□ 0.52
Tpm1-203ENSMUST00000050905 Smarca2Q6DIC0 1577 aa18.26■□□□□ 0.51
Tpm1-203ENSMUST00000050905 Smarca4Q3TKT4 1613 aaKnown RBP18.23■□□□□ 0.51
Tpm1-203ENSMUST00000050905 Cecr2E9Q2Z1 1453 aa18.21■□□□□ 0.51
Tpm1-203ENSMUST00000050905 Iqgap2Q3UQ44 1575 aa18.19■□□□□ 0.5
Tpm1-203ENSMUST00000050905 Fam135aQ6NS59 1506 aa18.18■□□□□ 0.5
Tpm1-203ENSMUST00000050905 Frmpd1A2AKB4 1549 aa18.08■□□□□ 0.48
Tpm1-203ENSMUST00000050905 Wdr62Q3U3T8 1523 aa18.08■□□□□ 0.48
Tpm1-203ENSMUST00000050905 Chic1Q8CBW7 227 aa18.04■□□□□ 0.48
Tpm1-203ENSMUST00000050905 Phldb1Q6PDH0 1371 aaKnown RBP17.97■□□□□ 0.47
Tpm1-203ENSMUST00000050905 Ubl4bQ9CQ84 188 aa17.85■□□□□ 0.45
Tpm1-203ENSMUST00000050905 Unc13aQ4KUS2 1712 aa17.8■□□□□ 0.44
Tpm1-203ENSMUST00000050905 Baz1bQ9Z277 1479 aa17.8■□□□□ 0.44
Tpm1-203ENSMUST00000050905 Mrc2Q64449 1479 aa17.75■□□□□ 0.43
Tpm1-203ENSMUST00000050905 CftrP26361 1476 aa17.69■□□□□ 0.42
Tpm1-203ENSMUST00000050905 Synj1Q8CHC4 1574 aa17.66■□□□□ 0.42
Tpm1-203ENSMUST00000050905 Cttnbp2B9EJA2 1648 aa17.62■□□□□ 0.41
Tpm1-203ENSMUST00000050905 Trim41Q5NCC3 630 aa17.52■□□□□ 0.4
Tpm1-203ENSMUST00000050905 Brd4Q9ESU6 1400 aaKnown RBP17.49■□□□□ 0.39
Tpm1-203ENSMUST00000050905 Dnajc5P60904 198 aa17.49■□□□□ 0.39
Tpm1-203ENSMUST00000050905 Ccdc136Q3TVA9 1136 aa17.48■□□□□ 0.39
Tpm1-203ENSMUST00000050905 Rtl1Q7M732 1744 aa17.46■□□□□ 0.39
Tpm1-203ENSMUST00000050905 Lrriq1Q0P5X1 1673 aa17.4■□□□□ 0.38
Tpm1-203ENSMUST00000050905 Cux2P70298 1426 aa17.38■□□□□ 0.37
Tpm1-203ENSMUST00000050905 Kif15Q6P9L6 1387 aa17.33■□□□□ 0.36
Tpm1-203ENSMUST00000050905 Esf1Q3V1V3 845 aaKnown RBP17.32■□□□□ 0.36
Tpm1-203ENSMUST00000050905 Kif21aQ9QXL2 1672 aa17.31■□□□□ 0.36
Tpm1-203ENSMUST00000050905 Rsf1E9PWW9 1441 aaKnown RBP17.3■□□□□ 0.36
Tpm1-203ENSMUST00000050905 Lamc3Q9R0B6 1581 aa17.19■□□□□ 0.34
Tpm1-203ENSMUST00000050905 Npm1Q61937 292 aaKnown RBP17.13■□□□□ 0.33
Tpm1-203ENSMUST00000050905 Eif4g3Q80XI3 1579 aaKnown RBP17.12■□□□□ 0.33
Tpm1-203ENSMUST00000050905 Urb2E9Q7L1 1524 aaKnown RBP17.05■□□□□ 0.32
Tpm1-203ENSMUST00000050905 Cep164Q5DU05 1446 aa17.04■□□□□ 0.32
Tpm1-203ENSMUST00000050905 Shroom2A2ALU4 1481 aa17.04■□□□□ 0.32
Tpm1-203ENSMUST00000050905 Plb1Q3TTY0 1478 aa17.01■□□□□ 0.31
Tpm1-203ENSMUST00000050905 Dhx29Q6PGC1 1365 aaKnown RBP17■□□□□ 0.31
Tpm1-203ENSMUST00000050905 Il27Q8K3I6 234 aa16.99■□□□□ 0.31
Tpm1-203ENSMUST00000050905 TnnQ80Z71 1560 aa16.94■□□□□ 0.3
Tpm1-203ENSMUST00000050905 Col17a1Q07563 1470 aa16.9■□□□□ 0.3
Tpm1-203ENSMUST00000050905 Ccdc18Q640L5 1455 aa16.9■□□□□ 0.3
Tpm1-203ENSMUST00000050905 LrpprcQ6PB66 1392 aaKnown RBP16.89■□□□□ 0.3
Tpm1-203ENSMUST00000050905 Camsap1A2AHC3 1581 aa16.88■□□□□ 0.29
Tpm1-203ENSMUST00000050905 Crocc2F6XLV1 1638 aa16.88■□□□□ 0.29
Tpm1-203ENSMUST00000050905 Top2bQ64511 1612 aa16.85■□□□□ 0.29
Tpm1-203ENSMUST00000050905 Golga3P55937 1487 aa16.85■□□□□ 0.29
Tpm1-203ENSMUST00000050905 Pabpn1Q8CCS6 302 aaKnown RBP16.83■□□□□ 0.28
Tpm1-203ENSMUST00000050905 Cngb1E1AZ71 1325 aa16.82■□□□□ 0.28
Tpm1-203ENSMUST00000050905 Rusc2Q80U22 1514 aa16.8■□□□□ 0.28
Tpm1-203ENSMUST00000050905 PogzQ8BZH4 1409 aaKnown RBP16.79■□□□□ 0.28
Tpm1-203ENSMUST00000050905 Ift140E9PY46 1464 aa16.77■□□□□ 0.28
Tpm1-203ENSMUST00000050905 Pelp1Q9DBD5 1123 aaKnown RBP16.75■□□□□ 0.27
Tpm1-203ENSMUST00000050905 Duox2A2AQ99 1517 aa16.71■□□□□ 0.27
Tpm1-203ENSMUST00000050905 Fmn1Q05860 1466 aa16.68■□□□□ 0.26
Tpm1-203ENSMUST00000050905 Disp1Q3TDN0 1521 aa16.68■□□□□ 0.26
Tpm1-203ENSMUST00000050905 Grin2bQ01097 1482 aa16.62■□□□□ 0.25
Tpm1-203ENSMUST00000050905 Samd9lQ69Z37 1561 aa16.61■□□□□ 0.25
Tpm1-203ENSMUST00000050905 Nup160Q9Z0W3 1402 aaKnown RBP16.59■□□□□ 0.25
Tpm1-203ENSMUST00000050905 Zcchc11B2RX14 1644 aaKnown RBP16.59■□□□□ 0.25
Tpm1-203ENSMUST00000050905 Setd1bQ8CFT2 1985 aa16.54■□□□□ 0.24
Tpm1-203ENSMUST00000050905 Rad54l2Q99NG0 1466 aa16.53■□□□□ 0.24
Tpm1-203ENSMUST00000050905 Cc2d2bA0A286YDU8 1405 aa16.53■□□□□ 0.24
Tpm1-203ENSMUST00000050905 Pbrm1Q8BSQ9 1634 aaKnown RBP16.49■□□□□ 0.23
Tpm1-203ENSMUST00000050905 Efcab5A0JP43 1406 aa16.48■□□□□ 0.23
Tpm1-203ENSMUST00000050905 Pcdh10E9PXQ7 1057 aa16.47■□□□□ 0.23
Tpm1-203ENSMUST00000050905 Magi3Q9EQJ9 1476 aa16.47■□□□□ 0.23
Tpm1-203ENSMUST00000050905 Adgrl3Q80TS3 1537 aa16.45■□□□□ 0.22
Tpm1-203ENSMUST00000050905 Grin2aP35436 1464 aa16.45■□□□□ 0.22
Tpm1-203ENSMUST00000050905 AqrQ8CFQ3 1481 aaKnown RBP16.43■□□□□ 0.22
Tpm1-203ENSMUST00000050905 PtprkP35822 1457 aa16.42■□□□□ 0.22
Tpm1-203ENSMUST00000050905 Ccdc88bQ4QRL3 1481 aa16.42■□□□□ 0.22
Tpm1-203ENSMUST00000050905 Fgd6Q69ZL1 1399 aa16.41■□□□□ 0.22
Tpm1-203ENSMUST00000050905 Cep170Q6A065 1588 aa16.41■□□□□ 0.22
Tpm1-203ENSMUST00000050905 Gapvd1Q6PAR5 1458 aa16.4■□□□□ 0.22
Tpm1-203ENSMUST00000050905 Arhgef5E9Q7D5 1581 aa16.39■□□□□ 0.21
Tpm1-203ENSMUST00000050905 Gm156Q58A37 223 aa16.38■□□□□ 0.21
Tpm1-203ENSMUST00000050905 Ttbk1Q6PCN3 1308 aa16.35■□□□□ 0.21
Tpm1-203ENSMUST00000050905 Pla2r1Q62028 1487 aa16.35■□□□□ 0.21
Tpm1-203ENSMUST00000050905 NrkQ9R0G8 1455 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 62.7 ms