RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Sipa1l1Q8C0T5 1782 aa12.11□□□□□ -0.47
Usp28-201ENSMUST00000047349 AampJ3QN89 436 aa12.1□□□□□ -0.47
Usp28-201ENSMUST00000047349 Dip2cE9PWR4 1557 aa12.1□□□□□ -0.47
Usp28-201ENSMUST00000047349 Adamts7Q68SA9 1657 aa12.1□□□□□ -0.47
Usp28-201ENSMUST00000047349 Cnga1P29974 684 aa12.1□□□□□ -0.47
Usp28-201ENSMUST00000047349 Kiaa0556Q8C753 1610 aa12.09□□□□□ -0.47
Usp28-201ENSMUST00000047349 Usp19Q3UJD6 1360 aa12.09□□□□□ -0.47
Usp28-201ENSMUST00000047349 Neurod2Q62414 383 aa12.09□□□□□ -0.47
Usp28-201ENSMUST00000047349 GsdmaQ9EST1 446 aa12.09□□□□□ -0.47
Usp28-201ENSMUST00000047349 Mroh1E0CZ22 1640 aa12.08□□□□□ -0.47
Usp28-201ENSMUST00000047349 Adgrl3Q80TS3 1537 aa12.08□□□□□ -0.48
Usp28-201ENSMUST00000047349 Egfem1Q8C088 590 aa12.08□□□□□ -0.48
Usp28-201ENSMUST00000047349 Hfm1D3Z4R1 1434 aa12.08□□□□□ -0.48
Usp28-201ENSMUST00000047349 Knl1Q66JQ7 1612 aa12.08□□□□□ -0.48
Usp28-201ENSMUST00000047349 Gm156Q58A37 223 aa12.08□□□□□ -0.48
Usp28-201ENSMUST00000047349 Exosc9Q9JHI7 438 aaKnown RBP12.08□□□□□ -0.48
Usp28-201ENSMUST00000047349 Mapk8ip3Q9ESN9 1337 aa12.08□□□□□ -0.48
Usp28-201ENSMUST00000047349 EspnQ9ET47 871 aa12.08□□□□□ -0.48
Usp28-201ENSMUST00000047349 Prdm2A2A7B5 1709 aaKnown RBP12.07□□□□□ -0.48
Usp28-201ENSMUST00000047349 Ak9G3UYQ4 1894 aa12.07□□□□□ -0.48
Usp28-201ENSMUST00000047349 Uspl1Q3ULM6 1089 aa12.07□□□□□ -0.48
Usp28-201ENSMUST00000047349 Myom1Q62234 1667 aaKnown RBP12.07□□□□□ -0.48
Usp28-201ENSMUST00000047349 AdgbG3UZ78 1657 aa12.07□□□□□ -0.48
Usp28-201ENSMUST00000047349 AU022751B1B0V2 589 aa12.06□□□□□ -0.48
Usp28-201ENSMUST00000047349 Atp1b4Q99ME6 356 aa12.06□□□□□ -0.48
Usp28-201ENSMUST00000047349 Ttc37F8VPK0 1563 aa12.06□□□□□ -0.48
Usp28-201ENSMUST00000047349 Prdm10Q3UTQ7 1184 aa12.06□□□□□ -0.48
Usp28-201ENSMUST00000047349 Cald1E9QA15 768 aaKnown RBP12.06□□□□□ -0.48
Usp28-201ENSMUST00000047349 Ccdc27Q3V036 639 aa12.05□□□□□ -0.48
Usp28-201ENSMUST00000047349 IbtkQ6ZPR6 1352 aaKnown RBP12.05□□□□□ -0.48
Usp28-201ENSMUST00000047349 Cfap65Q3V0B4 1847 aa12.05□□□□□ -0.48
Usp28-201ENSMUST00000047349 Ncbp3Q8BZR9 615 aaKnown RBP12.05□□□□□ -0.48
Usp28-201ENSMUST00000047349 Ttll13A4Q9F6 804 aa12.05□□□□□ -0.48
Usp28-201ENSMUST00000047349 Kiaa1107Q80TK0 1369 aa12.04□□□□□ -0.48
Usp28-201ENSMUST00000047349 Scaf11E9PZM7 1456 aaKnown RBP12.04□□□□□ -0.48
Usp28-201ENSMUST00000047349 Synj2Q9D2G5 1434 aa12.04□□□□□ -0.48
Usp28-201ENSMUST00000047349 Kdm2bQ6P1G2 1309 aa12.03□□□□□ -0.48
Usp28-201ENSMUST00000047349 Ift172Q6VH22 1749 aa12.03□□□□□ -0.48
Usp28-201ENSMUST00000047349 Chmp5Q9D7S9 219 aa12.03□□□□□ -0.48
Usp28-201ENSMUST00000047349 Ciz1Q8VEH2 845 aa12.02□□□□□ -0.48
Usp28-201ENSMUST00000047349 Arhgap23Q69ZH9 1483 aa12.02□□□□□ -0.48
Usp28-201ENSMUST00000047349 Apbb1Q9QXJ1 710 aa12.02□□□□□ -0.49
Usp28-201ENSMUST00000047349 Prrc2bQ7TPM1 1486 aaKnown RBP12.02□□□□□ -0.49
Usp28-201ENSMUST00000047349 Trim58Q5NCC9 485 aa12.01□□□□□ -0.49
Usp28-201ENSMUST00000047349 Shq1Q7TMX5 569 aa12.01□□□□□ -0.49
Usp28-201ENSMUST00000047349 Stk26Q99JT2 416 aa12.01□□□□□ -0.49
Usp28-201ENSMUST00000047349 U2af1Q9D883 239 aaKnown RBP12□□□□□ -0.49
Usp28-201ENSMUST00000047349 Ahdc1Q6PAL7 1594 aaKnown RBP12□□□□□ -0.49
Usp28-201ENSMUST00000047349 Gsto1O09131 240 aa11.99□□□□□ -0.49
Usp28-201ENSMUST00000047349 Tsen2Q6P7W5 460 aa11.99□□□□□ -0.49
Usp28-201ENSMUST00000047349 Yeats2Q3TUF7 1407 aa11.99□□□□□ -0.49
Usp28-201ENSMUST00000047349 Smc5Q8CG46 1101 aaKnown RBP11.99□□□□□ -0.49
Usp28-201ENSMUST00000047349 FanciQ8K368 1330 aa11.98□□□□□ -0.49
Usp28-201ENSMUST00000047349 Med14A2ABV5 1459 aaKnown RBP11.98□□□□□ -0.49
Usp28-201ENSMUST00000047349 B4galnt3Q6L8S8 986 aa11.98□□□□□ -0.49
Usp28-201ENSMUST00000047349 Ccar1Q8CH18 1146 aaKnown RBP11.98□□□□□ -0.49
Usp28-201ENSMUST00000047349 Nrxn1Q9CS84 1514 aa11.98□□□□□ -0.49
Usp28-201ENSMUST00000047349 Hecw2Q6I6G8 1578 aa11.98□□□□□ -0.49
Usp28-201ENSMUST00000047349 Iqsec2Q5DU25 1478 aa11.97□□□□□ -0.49
Usp28-201ENSMUST00000047349 Plekhg1F6S200 1446 aa11.97□□□□□ -0.49
Usp28-201ENSMUST00000047349 Ppp1r18Q8BQ30 594 aa11.97□□□□□ -0.49
Usp28-201ENSMUST00000047349 Ppm1gQ61074 542 aa11.96□□□□□ -0.49
Usp28-201ENSMUST00000047349 Adgrl1Q80TR1 1466 aa11.96□□□□□ -0.49
Usp28-201ENSMUST00000047349 Fam135bQ9DAI6 1403 aa11.96□□□□□ -0.49
Usp28-201ENSMUST00000047349 Utp14aQ640M1 767 aaKnown RBP11.96□□□□□ -0.5
Usp28-201ENSMUST00000047349 Ccdc9Q8VC31 543 aaKnown RBP11.96□□□□□ -0.5
Usp28-201ENSMUST00000047349 Polr3glQ8R0C0 218 aa11.94□□□□□ -0.5
Usp28-201ENSMUST00000047349 NudcO35685 332 aaKnown RBP11.94□□□□□ -0.5
Usp28-201ENSMUST00000047349 Cul9Q80TT8 1865 aa11.94□□□□□ -0.5
Usp28-201ENSMUST00000047349 CanxP35564 591 aaKnown RBP11.94□□□□□ -0.5
Usp28-201ENSMUST00000047349 Ksr2Q3UVC0 959 aa11.94□□□□□ -0.5
Usp28-201ENSMUST00000047349 Dbr1Q923B1 550 aa11.93□□□□□ -0.5
Usp28-201ENSMUST00000047349 Atp2b2Q9R0K7 1198 aa11.93□□□□□ -0.5
Usp28-201ENSMUST00000047349 Qser1A2BIE1 1698 aa11.93□□□□□ -0.5
Usp28-201ENSMUST00000047349 CltcQ68FD5 1675 aaKnown RBP11.92□□□□□ -0.5
Usp28-201ENSMUST00000047349 Q9D9H8 365 aa11.92□□□□□ -0.5
Usp28-201ENSMUST00000047349 Cdk19Q8BWD8 501 aa11.92□□□□□ -0.5
Usp28-201ENSMUST00000047349 Pank1Q8K4K6 548 aa11.92□□□□□ -0.5
Usp28-201ENSMUST00000047349 P2rx7Q9Z1M0 595 aa11.92□□□□□ -0.5
Usp28-201ENSMUST00000047349 PaskQ8CEE6 1383 aa11.91□□□□□ -0.5
Usp28-201ENSMUST00000047349 Cavin4A2AMM0 362 aa11.91□□□□□ -0.5
Usp28-201ENSMUST00000047349 Fchsd2Q3USJ8 740 aa11.91□□□□□ -0.5
Usp28-201ENSMUST00000047349 Afap1Q80YS6 731 aa11.91□□□□□ -0.5
Usp28-201ENSMUST00000047349 Apaf1O88879 1249 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 Ipo8Q7TMY7 1010 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 Dnai1Q8C0M8 701 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 PtprmP28828 1452 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 Naip7Q9JIB3 1402 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 Znf541Q0GGX2 1363 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 Znf521Q6KAS7 1311 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 Trim30dE9PWL0 497 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 Hsp90aa1P07901 733 aaKnown RBP11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 Tmc1Q8R4P5 757 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 Arhgef28P97433 1693 aa11.9□□□□□ -0.5
Usp28-201ENSMUST00000047349 NpatQ8BMA5 1420 aa11.89□□□□□ -0.51
Usp28-201ENSMUST00000047349 Atxn3Q9CVD2 355 aa11.89□□□□□ -0.51
Usp28-201ENSMUST00000047349 Tspyl2Q7TQI8 677 aa11.89□□□□□ -0.51
Usp28-201ENSMUST00000047349 ChgaP26339 463 aaKnown RBP11.89□□□□□ -0.51
Usp28-201ENSMUST00000047349 Dusp27Q148W8 1138 aa11.89□□□□□ -0.51
Usp28-201ENSMUST00000047349 Atl3Q91YH5 541 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms