RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Shroom2A2ALU4 1481 aa13.29□□□□□ -0.28
Limch1-201ENSMUST00000038188 Gpatch8A2A6A1 1505 aa13.29□□□□□ -0.28
Limch1-201ENSMUST00000038188 TrhQ62361 256 aa13.29□□□□□ -0.28
Limch1-201ENSMUST00000038188 Prex2Q3LAC4 1598 aa13.29□□□□□ -0.28
Limch1-201ENSMUST00000038188 Calr4Q3TQS0 420 aa13.29□□□□□ -0.28
Limch1-201ENSMUST00000038188 DekQ7TNV0 380 aaKnown RBP13.29□□□□□ -0.28
Limch1-201ENSMUST00000038188 Usp16Q99LG0 825 aa13.29□□□□□ -0.28
Limch1-201ENSMUST00000038188 Ppp4r2Q0VGB7 417 aa13.28□□□□□ -0.28
Limch1-201ENSMUST00000038188 Msl1Q6PDM1 616 aa13.28□□□□□ -0.28
Limch1-201ENSMUST00000038188 Kif16bB1AVY7 1312 aa13.28□□□□□ -0.28
Limch1-201ENSMUST00000038188 Rwdd1Q9CQK7 243 aa13.28□□□□□ -0.28
Limch1-201ENSMUST00000038188 Znf518aB2RRF6 1478 aaKnown RBP13.28□□□□□ -0.28
Limch1-201ENSMUST00000038188 Ankrd36D3Z4K0 1415 aa13.28□□□□□ -0.28
Limch1-201ENSMUST00000038188 Slain2Q8CI08 581 aa13.28□□□□□ -0.28
Limch1-201ENSMUST00000038188 Psrc1Q9D0P7 329 aa13.28□□□□□ -0.28
Limch1-201ENSMUST00000038188 Slc5a1Q8C3K6 665 aa13.28□□□□□ -0.28
Limch1-201ENSMUST00000038188 Jmjd4Q8BFT6 427 aa13.27□□□□□ -0.28
Limch1-201ENSMUST00000038188 Q8C5K5 320 aa13.27□□□□□ -0.28
Limch1-201ENSMUST00000038188 SnrkQ8VDU5 748 aa13.27□□□□□ -0.28
Limch1-201ENSMUST00000038188 Zscan10Q3URR7 782 aa13.27□□□□□ -0.29
Limch1-201ENSMUST00000038188 Ccdc60Q8C4J0 545 aa13.27□□□□□ -0.29
Limch1-201ENSMUST00000038188 Rbm26Q6NZN0 1012 aaKnown RBP13.27□□□□□ -0.29
Limch1-201ENSMUST00000038188 Neurod6P48986 337 aa13.26□□□□□ -0.29
Limch1-201ENSMUST00000038188 Ddb1Q3U1J4 1140 aaKnown RBP13.26□□□□□ -0.29
Limch1-201ENSMUST00000038188 Rapgef6Q5NCJ1 1609 aa13.26□□□□□ -0.29
Limch1-201ENSMUST00000038188 Smarcc1P97496 1104 aa13.26□□□□□ -0.29
Limch1-201ENSMUST00000038188 Kdm5bQ80Y84 1544 aa13.26□□□□□ -0.29
Limch1-201ENSMUST00000038188 Pcf11G3X9Z4 1553 aa13.26□□□□□ -0.29
Limch1-201ENSMUST00000038188 Map7O88735 730 aa13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Rock1P70335 1354 aa13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Asxl2Q8BZ32 1370 aa13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Mphosph10Q810V0 681 aaKnown RBP13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Flad1Q8R123 492 aa13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Nsfl1cQ9CZ44 370 aaKnown RBP13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Arhgef12Q8R4H2 1543 aaKnown RBP13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Hsp90ab1P11499 724 aaKnown RBP13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Trappc8E9PWG2 1437 aa13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Depdc5P61460 1591 aa13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Pde3bQ61409 1100 aa13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Cluap1Q8R3P7 413 aa13.25□□□□□ -0.29
Limch1-201ENSMUST00000038188 Cfdp1O88271 295 aaKnown RBP13.24□□□□□ -0.29
Limch1-201ENSMUST00000038188 Ncoa3O09000 1398 aa13.24□□□□□ -0.29
Limch1-201ENSMUST00000038188 Ncapd3Q6ZQK0 1506 aa13.24□□□□□ -0.29
Limch1-201ENSMUST00000038188 Ptch1Q61115 1434 aa13.24□□□□□ -0.29
Limch1-201ENSMUST00000038188 Nup160Q9Z0W3 1402 aaKnown RBP13.24□□□□□ -0.29
Limch1-201ENSMUST00000038188 PtprtQ99M80 1454 aa13.23□□□□□ -0.29
Limch1-201ENSMUST00000038188 Cabp2Q9JLK4 216 aa13.23□□□□□ -0.29
Limch1-201ENSMUST00000038188 EappQ5BU09 281 aa13.23□□□□□ -0.29
Limch1-201ENSMUST00000038188 MccE9PWI3 1003 aa13.22□□□□□ -0.29
Limch1-201ENSMUST00000038188 Mak16Q8BGS0 296 aaKnown RBP13.22□□□□□ -0.29
Limch1-201ENSMUST00000038188 Tceal9Q9DD24 104 aa13.22□□□□□ -0.29
Limch1-201ENSMUST00000038188 Fchsd2Q3USJ8 740 aa13.21□□□□□ -0.29
Limch1-201ENSMUST00000038188 Nlrp3Q8R4B8 1033 aa13.21□□□□□ -0.29
Limch1-201ENSMUST00000038188 Ddx17Q501J6 650 aaKnown RBP13.21□□□□□ -0.29
Limch1-201ENSMUST00000038188 Btbd11Q6GQW0 1109 aa13.21□□□□□ -0.29
Limch1-201ENSMUST00000038188 Eif2s2Q99L45 331 aaKnown RBP13.21□□□□□ -0.29
Limch1-201ENSMUST00000038188 Frmpd2A0A140LI67 1392 aa13.21□□□□□ -0.3
Limch1-201ENSMUST00000038188 Gpr162Q3UN16 588 aa13.2□□□□□ -0.3
Limch1-201ENSMUST00000038188 Isy1Q69ZQ2 285 aaKnown RBP13.2□□□□□ -0.3
Limch1-201ENSMUST00000038188 Eif4g1Q6NZJ6 1600 aaKnown RBP13.2□□□□□ -0.3
Limch1-201ENSMUST00000038188 Znf219Q6IQX8 726 aa13.2□□□□□ -0.3
Limch1-201ENSMUST00000038188 Ttc19Q8CC21 365 aa13.2□□□□□ -0.3
Limch1-201ENSMUST00000038188 Abcc5Q9R1X5 1436 aa13.2□□□□□ -0.3
Limch1-201ENSMUST00000038188 Ccne1Q61457 408 aa13.2□□□□□ -0.3
Limch1-201ENSMUST00000038188 Cadps2Q8BYR5 1297 aa13.2□□□□□ -0.3
Limch1-201ENSMUST00000038188 Vps8Q0P5W1 1427 aa13.19□□□□□ -0.3
Limch1-201ENSMUST00000038188 CrcpO35427 148 aa13.19□□□□□ -0.3
Limch1-201ENSMUST00000038188 Stard3nlQ9DCI3 235 aa13.19□□□□□ -0.3
Limch1-201ENSMUST00000038188 InsrP15208 1372 aa13.19□□□□□ -0.3
Limch1-201ENSMUST00000038188 Synj2Q9D2G5 1434 aa13.19□□□□□ -0.3
Limch1-201ENSMUST00000038188 Trim34bJ3QNR8 485 aa13.19□□□□□ -0.3
Limch1-201ENSMUST00000038188 Pbrm1Q8BSQ9 1634 aaKnown RBP13.19□□□□□ -0.3
Limch1-201ENSMUST00000038188 Gli2Q0VGT2 1544 aa13.19□□□□□ -0.3
Limch1-201ENSMUST00000038188 CatipB9EKE5 520 aa13.18□□□□□ -0.3
Limch1-201ENSMUST00000038188 Txnrd1Q9JMH6 613 aa13.18□□□□□ -0.3
Limch1-201ENSMUST00000038188 Iffo2Q8R2V2 512 aa13.18□□□□□ -0.3
Limch1-201ENSMUST00000038188 KnstrnQ9D9Z1 312 aaKnown RBP13.18□□□□□ -0.3
Limch1-201ENSMUST00000038188 Swt1Q9DBQ9 907 aa13.18□□□□□ -0.3
Limch1-201ENSMUST00000038188 Ccdc155Q80VJ8 648 aa13.18□□□□□ -0.3
Limch1-201ENSMUST00000038188 Tiam1Q60610 1591 aa13.17□□□□□ -0.3
Limch1-201ENSMUST00000038188 DaxxO35613 739 aa13.17□□□□□ -0.3
Limch1-201ENSMUST00000038188 G3bp1P97855 465 aaKnown RBP13.17□□□□□ -0.3
Limch1-201ENSMUST00000038188 Gnai1B2RSH2 354 aa13.17□□□□□ -0.3
Limch1-201ENSMUST00000038188 Sv2bQ8BG39 683 aa13.17□□□□□ -0.3
Limch1-201ENSMUST00000038188 Gnai3Q9DC51 354 aa13.17□□□□□ -0.3
Limch1-201ENSMUST00000038188 Naip6Q9JIB6 1403 aa13.17□□□□□ -0.3
Limch1-201ENSMUST00000038188 Taok3Q8BYC6 898 aa13.17□□□□□ -0.3
Limch1-201ENSMUST00000038188 Anp32aO35381 247 aa13.16□□□□□ -0.3
Limch1-201ENSMUST00000038188 Arhgef1Q61210 920 aaKnown RBP13.16□□□□□ -0.3
Limch1-201ENSMUST00000038188 Hspa1lP16627 641 aa13.16□□□□□ -0.3
Limch1-201ENSMUST00000038188 Ankib1Q6ZPS6 1085 aa13.16□□□□□ -0.3
Limch1-201ENSMUST00000038188 Nyap1Q6PFX7 833 aa13.16□□□□□ -0.3
Limch1-201ENSMUST00000038188 OscarQ8VBT3 265 aa13.16□□□□□ -0.3
Limch1-201ENSMUST00000038188 Naip2Q9QUK4 1447 aa13.16□□□□□ -0.3
Limch1-201ENSMUST00000038188 Cfap65Q3V0B4 1847 aa13.15□□□□□ -0.3
Limch1-201ENSMUST00000038188 Ylpm1Q9R0I7 1386 aaKnown RBP13.15□□□□□ -0.3
Limch1-201ENSMUST00000038188 Naip7Q9JIB3 1402 aa13.14□□□□□ -0.31
Limch1-201ENSMUST00000038188 Abl1P00520 1123 aa13.14□□□□□ -0.31
Limch1-201ENSMUST00000038188 Slf2Q6P9P0 1278 aa13.14□□□□□ -0.31
Limch1-201ENSMUST00000038188 Idi2Q8BFZ6 227 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms