RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 B4galnt3Q6L8S8 986 aa9.55□□□□□ -0.88
Ddb1-201ENSMUST00000025649 CltcQ68FD5 1675 aaKnown RBP9.54□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Puf60Q3UEB3 564 aaKnown RBP9.54□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Rassf8Q8CJ96 419 aa9.54□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Skint5A7XUY5 1461 aa9.54□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Lamc1P02468 1607 aaKnown RBP9.54□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Dnai2A2AC93 623 aa9.54□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Efcab6Q6P1E8 1516 aa9.54□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Tnnt1O88346 262 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Cul9Q80TT8 1865 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Usp40Q8BWR4 1235 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Tcerg1Q8CGF7 1100 aaKnown RBP9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Cabp4Q8VHC5 271 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Prex1Q69ZK0 1650 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 AnkarA2RT91 1465 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Myom2Q14BI5 1463 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 AatkQ80YE4 1365 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Dapk1Q80YE7 1442 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Myo5cE9Q1F5 1742 aa9.53□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Prrc2bQ7TPM1 1486 aaKnown RBP9.52□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Pak3Q61036 559 aa9.52□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Stk31Q99MW1 1018 aa9.52□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Robo2Q7TPD3 1470 aa9.51□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Ecm2Q5FW85 670 aa9.51□□□□□ -0.89
Ddb1-201ENSMUST00000025649 PtmsQ9D0J8 101 aaKnown RBP9.51□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Abcc6Q9R1S7 1498 aa9.51□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Ksr2Q3UVC0 959 aa9.51□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Ccar1Q8CH18 1146 aaKnown RBP9.51□□□□□ -0.89
Ddb1-201ENSMUST00000025649 MecomP14404 1042 aa9.51□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Tarbp1E9Q368 1579 aa9.51□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Knl1Q66JQ7 1612 aa9.51□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Slc52a2Q9D8F3 450 aa9.5□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Tsen2Q6P7W5 460 aa9.49□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Ppip5k1A2ARP1 1436 aa9.49□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Anapc15P60007 132 aa9.49□□□□□ -0.89
Ddb1-201ENSMUST00000025649 PtprmP28828 1452 aa9.49□□□□□ -0.89
Ddb1-201ENSMUST00000025649 EspnQ9ET47 871 aa9.49□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Adgrb3Q80ZF8 1522 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Chmp3Q9CQ10 224 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Trpm1Q2TV84 1622 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Ercc6l2Q9JIM3 1537 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Pank3Q8R2W9 370 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Polr3aB2RXC6 1390 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Asxl2Q8BZ32 1370 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Alpk3Q924C5 1678 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Mink1Q9JM52 1308 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Ccdc27Q3V036 639 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Iffo2Q8R2V2 512 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Znf330Q922H9 316 aa9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 HnrnpmQ9D0E1 729 aaKnown RBP9.48□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Pibf1E9Q6K3 756 aa9.47□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Lmod3E9QA62 571 aa9.47□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Cluap1Q8R3P7 413 aa9.47□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Supt16hQ920B9 1047 aa9.47□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Dot1lQ6XZL8 1540 aa9.47□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Rab11fip3Q8CHD8 1047 aa9.47□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Akap12Q9WTQ5 1684 aa9.47□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Fam71e1A1L3C1 212 aa9.46□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Fam184bQ0KK56 942 aa9.46□□□□□ -0.89
Ddb1-201ENSMUST00000025649 CrbnQ8C7D2 445 aa9.46□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Naip7Q9JIB3 1402 aa9.46□□□□□ -0.89
Ddb1-201ENSMUST00000025649 4930407I10RikD3Z5T8 1512 aa9.46□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Slc4a3P16283 1227 aa9.46□□□□□ -0.89
Ddb1-201ENSMUST00000025649 Ahdc1Q6PAL7 1594 aaKnown RBP9.46□□□□□ -0.9
Ddb1-201ENSMUST00000025649 AU022751B1B0V2 589 aa9.45□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Adamts7Q68SA9 1657 aa9.45□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Adamtsl3G3UXC7 1706 aa9.45□□□□□ -0.9
Ddb1-201ENSMUST00000025649 1700123L14RikQ3V2K7 440 aa9.45□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Atp2b2Q9R0K7 1198 aa9.45□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Iqgap3F8VQ29 1632 aa9.44□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Gm973E9Q295 1059 aa9.44□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Smc4Q8CG47 1286 aa9.44□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Inpp5dQ9ES52 1191 aa9.44□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Gm21190A0A0G2JGJ6 266 aa9.43□□□□□ -0.9
Ddb1-201ENSMUST00000025649 GsdmaQ9EST1 446 aa9.43□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Fyb1O35601 819 aa9.43□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Brpf1B2RRD7 1212 aa9.42□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Evi5lH3BKQ3 813 aa9.42□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Senp3Q9EP97 568 aaKnown RBP9.42□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Chmp7Q8R1T1 451 aa9.42□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Dnai1Q8C0M8 701 aa9.42□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Tecpr2Q3UH45 1423 aa9.41□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Kif21bQ9QXL1 1668 aa9.41□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Med14A2ABV5 1459 aaKnown RBP9.41□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Ralbp1Q62172 648 aa9.41□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Rapgef3Q8VCC8 918 aa9.41□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Kif7B7ZNG0 1348 aa9.41□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Cgnl1Q6AW69 1298 aa9.41□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Mug2P28666 1451 aa9.41□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Arhgap23Q69ZH9 1483 aa9.41□□□□□ -0.9
Ddb1-201ENSMUST00000025649 R3hcc1Q8BSI6 488 aa9.4□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Adam1bQ8R534 806 aa9.4□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Ciz1Q8VEH2 845 aa9.4□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Bcl11bQ99PV8 884 aa9.4□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Cpsf1Q9EPU4 1441 aaKnown RBP9.4□□□□□ -0.9
Ddb1-201ENSMUST00000025649 Ccdc60Q8C4J0 545 aa9.4□□□□□ -0.91
Ddb1-201ENSMUST00000025649 RictorQ6QI06 1708 aa9.39□□□□□ -0.91
Ddb1-201ENSMUST00000025649 SafbD3YXK2 937 aaKnown RBP9.39□□□□□ -0.91
Ddb1-201ENSMUST00000025649 Gsto1O09131 240 aa9.39□□□□□ -0.91
Ddb1-201ENSMUST00000025649 Cdk13Q69ZA1 1511 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 124.3 ms