RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Arhgef28P97433 1693 aa27.45■■□□□ 1.98
Cdx1-201ENSMUST00000025521 CenpjQ569L8 1344 aa27.45■■□□□ 1.98
Cdx1-201ENSMUST00000025521 NpatQ8BMA5 1420 aa27.44■■□□□ 1.98
Cdx1-201ENSMUST00000025521 Dcaf11Q91VU6 549 aa27.43■■□□□ 1.98
Cdx1-201ENSMUST00000025521 Esx1O88933 382 aa27.41■■□□□ 1.98
Cdx1-201ENSMUST00000025521 Zc3h13E9Q784 1729 aaKnown RBP27.41■■□□□ 1.98
Cdx1-201ENSMUST00000025521 Nolc1E9Q5C9 702 aaKnown RBP27.4■■□□□ 1.98
Cdx1-201ENSMUST00000025521 Kif16bB1AVY7 1312 aa27.39■■□□□ 1.97
Cdx1-201ENSMUST00000025521 Nrxn1Q9CS84 1514 aa27.38■■□□□ 1.97
Cdx1-201ENSMUST00000025521 Naip7Q9JIB3 1402 aa27.36■■□□□ 1.97
Cdx1-201ENSMUST00000025521 Ppp4r2Q0VGB7 417 aa27.35■■□□□ 1.97
Cdx1-201ENSMUST00000025521 Usp19Q3UJD6 1360 aa27.33■■□□□ 1.97
Cdx1-201ENSMUST00000025521 Fam71e1A1L3C1 212 aa27.32■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Nlrp6Q91WS2 869 aa27.32■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Plekhg1F6S200 1446 aa27.32■■□□□ 1.96
Cdx1-201ENSMUST00000025521 PplQ9R269 1755 aa27.32■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Scaf11E9PZM7 1456 aaKnown RBP27.31■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Afap1Q80YS6 731 aa27.31■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Rad21Q61550 635 aaKnown RBP27.3■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Adgrl1Q80TR1 1466 aa27.3■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Kiaa1107Q80TK0 1369 aa27.29■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Cep170bQ80U49 1574 aa27.28■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Med14A2ABV5 1459 aaKnown RBP27.28■■□□□ 1.96
Cdx1-201ENSMUST00000025521 TnikP83510 1323 aa27.27■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Abca14E9Q8F8 1683 aa27.27■■□□□ 1.96
Cdx1-201ENSMUST00000025521 Shq1Q7TMX5 569 aa27.27■■□□□ 1.96
Cdx1-201ENSMUST00000025521 IbtkQ6ZPR6 1352 aaKnown RBP27.26■■□□□ 1.95
Cdx1-201ENSMUST00000025521 Cnga1P29974 684 aa27.26■■□□□ 1.95
Cdx1-201ENSMUST00000025521 Plekhh1Q80TI1 1356 aa27.26■■□□□ 1.95
Cdx1-201ENSMUST00000025521 CrbnQ8C7D2 445 aa27.25■■□□□ 1.95
Cdx1-201ENSMUST00000025521 Dip2aQ8BWT5 1523 aa27.22■■□□□ 1.95
Cdx1-201ENSMUST00000025521 Cald1E9QA15 768 aaKnown RBP27.2■■□□□ 1.95
Cdx1-201ENSMUST00000025521 Map4k4P97820 1233 aaKnown RBP27.2■■□□□ 1.95
Cdx1-201ENSMUST00000025521 Prkrip1Q9CWV6 186 aaKnown RBP27.2■■□□□ 1.95
Cdx1-201ENSMUST00000025521 Mbd3Q9Z2D8 285 aaKnown RBP27.2■■□□□ 1.95
Cdx1-201ENSMUST00000025521 Ercc6l2Q9JIM3 1537 aa27.2■■□□□ 1.94
Cdx1-201ENSMUST00000025521 NktrP30415 1453 aa27.2■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Supt16hQ920B9 1047 aa27.19■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Golga2Q921M4 999 aa27.19■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Myt1Q8CFC2 1127 aa27.18■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Stk26Q99JT2 416 aa27.18■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Uspl1Q3ULM6 1089 aa27.17■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Nwd1A6H603 1563 aa27.17■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Iqsec2Q5DU25 1478 aa27.17■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Gemin5Q8BX17 1502 aaKnown RBP27.17■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Ralbp1Q62172 648 aa27.16■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Atp1b4Q99ME6 356 aa27.16■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Exosc9Q9JHI7 438 aaKnown RBP27.16■■□□□ 1.94
Cdx1-201ENSMUST00000025521 NeflP08551 543 aa27.15■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Chd2E9PZM4 1827 aaKnown RBP27.15■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Adamtsl3G3UXC7 1706 aa27.15■■□□□ 1.94
Cdx1-201ENSMUST00000025521 Speer4f1Q9D5Q6 258 aa27.14■■□□□ 1.93
Cdx1-201ENSMUST00000025521 Q9D9H8 365 aa27.12■■□□□ 1.93
Cdx1-201ENSMUST00000025521 Gsto1O09131 240 aa27.12■■□□□ 1.93
Cdx1-201ENSMUST00000025521 Ccdc30Q8BVF4 654 aa27.12■■□□□ 1.93
Cdx1-201ENSMUST00000025521 Tcerg1Q8CGF7 1100 aaKnown RBP27.12■■□□□ 1.93
Cdx1-201ENSMUST00000025521 GsdmaQ9EST1 446 aa27.12■■□□□ 1.93
Cdx1-201ENSMUST00000025521 Ncbp3Q8BZR9 615 aaKnown RBP27.11■■□□□ 1.93
Cdx1-201ENSMUST00000025521 Kcnh8P59111 1102 aa27.1■■□□□ 1.93
Cdx1-201ENSMUST00000025521 Utp14aQ640M1 767 aaKnown RBP27.09■■□□□ 1.93
Cdx1-201ENSMUST00000025521 Rwdd1Q9CQK7 243 aa27.09■■□□□ 1.93
Cdx1-201ENSMUST00000025521 P2rx7Q9Z1M0 595 aa27.09■■□□□ 1.93
Cdx1-201ENSMUST00000025521 FanciQ8K368 1330 aa27.08■■□□□ 1.93
Cdx1-201ENSMUST00000025521 Liat1Q810M6 228 aa27.07■■□□□ 1.92
Cdx1-201ENSMUST00000025521 Atp2b2Q9R0K7 1198 aa27.07■■□□□ 1.92
Cdx1-201ENSMUST00000025521 Cdk19Q8BWD8 501 aa27.03■■□□□ 1.92
Cdx1-201ENSMUST00000025521 Prdm10Q3UTQ7 1184 aa27.02■■□□□ 1.92
Cdx1-201ENSMUST00000025521 Zmym3Q9JLM4 1370 aa27.02■■□□□ 1.92
Cdx1-201ENSMUST00000025521 Cps1Q8C196 1500 aa27.01■■□□□ 1.91
Cdx1-201ENSMUST00000025521 Znf541Q0GGX2 1363 aa27■■□□□ 1.91
Cdx1-201ENSMUST00000025521 Usp32F8VPZ3 1604 aa27■■□□□ 1.91
Cdx1-201ENSMUST00000025521 Rtl5Q5DTT4 599 aa26.99■■□□□ 1.91
Cdx1-201ENSMUST00000025521 Slit3Q9WVB4 1523 aa26.99■■□□□ 1.91
Cdx1-201ENSMUST00000025521 Kif1aP33173 1695 aa26.97■■□□□ 1.91
Cdx1-201ENSMUST00000025521 NinlQ6ZQ12 1394 aa26.97■■□□□ 1.91
Cdx1-201ENSMUST00000025521 Neurod2Q62414 383 aa26.96■■□□□ 1.91
Cdx1-201ENSMUST00000025521 Zranb1Q7M760 708 aa26.95■■□□□ 1.9
Cdx1-201ENSMUST00000025521 Slc4a3P16283 1227 aa26.93■■□□□ 1.9
Cdx1-201ENSMUST00000025521 Tnrc6bQ8BKI2 1810 aaKnown RBP26.93■■□□□ 1.9
Cdx1-201ENSMUST00000025521 Tsen2Q6P7W5 460 aa26.92■■□□□ 1.9
Cdx1-201ENSMUST00000025521 Arap3Q8R5G7 1538 aa26.9■■□□□ 1.9
Cdx1-201ENSMUST00000025521 Kdm2bQ6P1G2 1309 aa26.89■■□□□ 1.9
Cdx1-201ENSMUST00000025521 Map3k19E9Q3S4 1311 aa26.89■■□□□ 1.89
Cdx1-201ENSMUST00000025521 Psme1P97371 249 aa26.89■■□□□ 1.89
Cdx1-201ENSMUST00000025521 Ciz1Q8VEH2 845 aa26.89■■□□□ 1.89
Cdx1-201ENSMUST00000025521 U2af1Q9D883 239 aaKnown RBP26.89■■□□□ 1.89
Cdx1-201ENSMUST00000025521 PtpruB1AUH1 1446 aa26.88■■□□□ 1.89
Cdx1-201ENSMUST00000025521 Dip2bQ3UH60 1574 aa26.86■■□□□ 1.89
Cdx1-201ENSMUST00000025521 Txndc2Q6P902 515 aa26.86■■□□□ 1.89
Cdx1-201ENSMUST00000025521 Asxl2Q8BZ32 1370 aa26.86■■□□□ 1.89
Cdx1-201ENSMUST00000025521 Uhrf1bp1B2KF50 1429 aa26.85■■□□□ 1.89
Cdx1-201ENSMUST00000025521 Pik3c2bE9QAN8 1632 aa26.84■■□□□ 1.89
Cdx1-201ENSMUST00000025521 Pik3r4Q8VD65 1358 aa26.84■■□□□ 1.89
Cdx1-201ENSMUST00000025521 PzpQ61838 1495 aa26.84■■□□□ 1.89
Cdx1-201ENSMUST00000025521 Trim28Q62318 834 aa26.82■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Fam135bQ9DAI6 1403 aa26.82■■□□□ 1.88
Cdx1-201ENSMUST00000025521 AampJ3QN89 436 aa26.81■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Pak3Q61036 559 aa26.81■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Idi2Q8BFZ6 227 aa26.81■■□□□ 1.88
Cdx1-201ENSMUST00000025521 Egfem1Q8C088 590 aa26.8■■□□□ 1.88
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms