RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A TY2B-LR1P0C2J3 1770 aa0.21□□□□□ -2.38
YOR343W-AYOR343W-A ESP1Q03018 1630 aa0.2□□□□□ -2.38
YOR343W-AYOR343W-A YIL156W-BQ2V2P4 73 aa0.2□□□□□ -2.38
YOR343W-AYOR343W-A YMR175W-AQ3E766 64 aa0.2□□□□□ -2.38
YOR343W-AYOR343W-A YKL018C-AQ3E7A7 99 aa0.2□□□□□ -2.38
YOR343W-AYOR343W-A SMC4Q12267 1418 aa0.2□□□□□ -2.38
YOR343W-AYOR343W-A SIP18P50263 79 aa0.19□□□□□ -2.38
YOR343W-AYOR343W-A SIN3P22579 1536 aa0.19□□□□□ -2.38
YOR343W-AYOR343W-A QCR9P22289 66 aa0.18□□□□□ -2.38
YOR343W-AYOR343W-A YBL044WP38194 122 aa0.18□□□□□ -2.38
YOR343W-AYOR343W-A POC4Q12245 148 aaPredicted RBP0.18□□□□□ -2.38
YOR343W-AYOR343W-A ATP17Q06405 101 aa0.17□□□□□ -2.38
YOR343W-AYOR343W-A TY2B-CP25384 1770 aa0.17□□□□□ -2.38
YOR343W-AYOR343W-A TY2B-DR2Q03494 1770 aa0.17□□□□□ -2.38
YOR343W-AYOR343W-A TY2B-DR3Q07791 1770 aaKnown RBP0.17□□□□□ -2.38
YOR343W-AYOR343W-A TY2B-OR1Q12113 1770 aa0.17□□□□□ -2.38
YOR343W-AYOR343W-A TY2B-DR1Q12472 1770 aa0.17□□□□□ -2.38
YOR343W-AYOR343W-A TY2B-OR2Q12501 1770 aa0.17□□□□□ -2.38
YOR343W-AYOR343W-A SWM2P40342 146 aa0.16□□□□□ -2.38
YOR343W-AYOR343W-A RPS29AP41057 56 aaKnown RBP0.16□□□□□ -2.38
YOR343W-AYOR343W-A YPR145C-AQ2V2P0 78 aa0.16□□□□□ -2.38
YOR343W-AYOR343W-A TY1B-NL2Q99337 1749 aaKnown RBP0.16□□□□□ -2.38
YOR343W-AYOR343W-A PAU7P39545 55 aa0.15□□□□□ -2.38
YOR343W-AYOR343W-A YDR182W-AQ3E796 67 aa0.15□□□□□ -2.38
YOR343W-AYOR343W-A HUB1Q6Q546 73 aa0.13□□□□□ -2.39
YOR343W-AYOR343W-A COA2Q3E823 68 aa0.13□□□□□ -2.39
YOR343W-AYOR343W-A IRC20Q06554 1556 aa0.12□□□□□ -2.39
YOR343W-AYOR343W-A TY2B-BQ12491 1770 aa0.12□□□□□ -2.39
YOR343W-AYOR343W-A UTP20P35194 2493 aaKnown RBP0.11□□□□□ -2.39
YOR343W-AYOR343W-A RPO21P04050 1733 aaKnown RBP0.11□□□□□ -2.39
YOR343W-AYOR343W-A TY2B-FP0CX63 1770 aa0.11□□□□□ -2.39
YOR343W-AYOR343W-A TY2B-GR2P0CX64 1770 aa0.11□□□□□ -2.39
YOR343W-AYOR343W-A SPO14P36126 1683 aa0.11□□□□□ -2.39
YOR343W-AYOR343W-A YDL022C-AP0C5L6 82 aa0.11□□□□□ -2.39
YOR343W-AYOR343W-A SSS1P35179 80 aa0.11□□□□□ -2.39
YOR343W-AYOR343W-A YSP2Q06681 1438 aa0.1□□□□□ -2.39
YOR343W-AYOR343W-A YOR011W-AQ3E807 68 aa0.1□□□□□ -2.39
YOR343W-AYOR343W-A YGR121W-AQ3E816 71 aa0.1□□□□□ -2.39
YOR343W-AYOR343W-A VTH1P40438 1549 aa0.09□□□□□ -2.4
YOR343W-AYOR343W-A VTH2P40890 1549 aa0.09□□□□□ -2.4
YOR343W-AYOR343W-A YBL039W-BP0C268 59 aa0.09□□□□□ -2.4
YOR343W-AYOR343W-A YOR394C-AQ8TGJ0 55 aa0.09□□□□□ -2.4
YOR343W-AYOR343W-A TY3B-GQ99315 1547 aa0.07□□□□□ -2.4
YOR343W-AYOR343W-A IML1P47170 1584 aa0.07□□□□□ -2.4
YOR343W-AYOR343W-A FKS3Q04952 1785 aa0.07□□□□□ -2.4
YOR343W-AYOR343W-A TOS6P48560 102 aa0.07□□□□□ -2.4
YOR343W-AYOR343W-A YBR200W-AQ3E755 54 aa0.07□□□□□ -2.4
YOR343W-AYOR343W-A YGR035W-AQ45U48 73 aa0.06□□□□□ -2.4
YOR343W-AYOR343W-A YOR032W-AQ8TGS1 66 aa0.05□□□□□ -2.4
YOR343W-AYOR343W-A YHR213W-AQ8TGT4 77 aa0.05□□□□□ -2.4
YOR343W-AYOR343W-A TIM12P32830 109 aa0.04□□□□□ -2.4
YOR343W-AYOR343W-A RPS27AP35997 82 aaKnown RBP0.04□□□□□ -2.4
YOR343W-AYOR343W-A TOR1P35169 2470 aa0.03□□□□□ -2.4
YOR343W-AYOR343W-A DOP1Q03921 1698 aa0.02□□□□□ -2.41
YOR343W-AYOR343W-A YDR119W-AQ2V2P9 66 aa0.02□□□□□ -2.41
YOR343W-AYOR343W-A UFD4P33202 1483 aa0.02□□□□□ -2.41
YOR343W-AYOR343W-A PAI3P01094 68 aa0.01□□□□□ -2.41
YOR343W-AYOR343W-A SPI1P40092 148 aa0.01□□□□□ -2.41
YOR343W-AYOR343W-A YBR230W-AQ3E762 66 aa0.01□□□□□ -2.41
YOR343W-AYOR343W-A RRP5Q05022 1729 aaKnown RBP0□□□□□ -2.41
YOR343W-AYOR343W-A YDR524C-BQ3E6R4 66 aa0□□□□□ -2.41
YOR343W-AYOR343W-A YBR056W-AI2HB52 66 aa-0.01□□□□□ -2.41
YOR343W-AYOR343W-A YGL258W-AQ3E740 77 aa-0.01□□□□□ -2.41
YOR343W-AYOR343W-A YFL041W-AQ3E817 63 aa-0.01□□□□□ -2.41
YOR343W-AYOR343W-A ARO1P08566 1588 aaKnown RBP-0.02□□□□□ -2.41
YOR343W-AYOR343W-A DNF2Q12675 1612 aa-0.02□□□□□ -2.41
YOR343W-AYOR343W-A IQG1Q12280 1495 aa-0.02□□□□□ -2.41
YOR343W-AYOR343W-A YSY6P38374 65 aa-0.03□□□□□ -2.41
YOR343W-AYOR343W-A ERI1P62651 68 aaKnown RBP-0.03□□□□□ -2.41
YOR343W-AYOR343W-A NUP159P40477 1460 aa-0.03□□□□□ -2.41
YOR343W-AYOR343W-A HAP1P0CE41 1502 aa-0.04□□□□□ -2.42
YOR343W-AYOR343W-A RPO31P04051 1460 aa-0.04□□□□□ -2.42
YOR343W-AYOR343W-A YOL131WQ08270 108 aa-0.05□□□□□ -2.42
YOR343W-AYOR343W-A RPS30AP0CX33 63 aaKnown RBP-0.06□□□□□ -2.42
YOR343W-AYOR343W-A RPS30BP0CX34 63 aaKnown RBP-0.06□□□□□ -2.42
YOR343W-AYOR343W-A VPS15P22219 1454 aa-0.07□□□□□ -2.42
YOR343W-AYOR343W-A BCK1Q01389 1478 aa-0.07□□□□□ -2.42
YOR343W-AYOR343W-A SCC2Q04002 1493 aa-0.07□□□□□ -2.42
YOR343W-AYOR343W-A YLR157W-DP0CE99 70 aa-0.07□□□□□ -2.42
YOR343W-AYOR343W-A YLL006W-AQ3E814 58 aa-0.07□□□□□ -2.42
YOR343W-AYOR343W-A YGR146C-AQ8TGT9 53 aa-0.07□□□□□ -2.42
YOR343W-AYOR343W-A YOR072W-BQ3E832 53 aa-0.08□□□□□ -2.42
YOR343W-AYOR343W-A VMR1P38735 1592 aa-0.09□□□□□ -2.42
YOR343W-AYOR343W-A PDR12Q02785 1511 aa-0.09□□□□□ -2.42
YOR343W-AYOR343W-A YHR050W-AQ05451 56 aa-0.1□□□□□ -2.42
YOR343W-AYOR343W-A YIL102C-AQ2V2P5 75 aa-0.1□□□□□ -2.42
YOR343W-AYOR343W-A DNF1P32660 1571 aa-0.11□□□□□ -2.43
YOR343W-AYOR343W-A MYO4P32492 1471 aa-0.12□□□□□ -2.43
YOR343W-AYOR343W-A RPS27BP38711 82 aa-0.13□□□□□ -2.43
YOR343W-AYOR343W-A TCB3Q03640 1545 aaKnown RBP-0.14□□□□□ -2.43
YOR343W-AYOR343W-A PDR15Q04182 1529 aaKnown RBP-0.14□□□□□ -2.43
YOR343W-AYOR343W-A TY1B-DR4Q07793 1604 aa-0.17□□□□□ -2.44
YOR343W-AYOR343W-A YOL166W-AQ8TGJ1 51 aa-0.19□□□□□ -2.44
YOR343W-AYOR343W-A SNQ2P32568 1501 aaKnown RBP-0.23□□□□□ -2.45
YOR343W-AYOR343W-A YOR192C-CQ3E736 78 aa-0.23□□□□□ -2.45
YOR343W-AYOR343W-A YOR093CQ12275 1648 aa-0.23□□□□□ -2.45
YOR343W-AYOR343W-A VMA9Q3E7B6 73 aa-0.24□□□□□ -2.45
YOR343W-AYOR343W-A YPR117WQ06116 2489 aa-0.24□□□□□ -2.45
YOR343W-AYOR343W-A TOR2P32600 2474 aaKnown RBP-0.25□□□□□ -2.45
YOR343W-AYOR343W-A FMP27Q06179 2628 aa-0.25□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms