RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	SPT6	P23615	1451 aa	Known RBP	0.6	□□□□□ -2.31
CAF20	YOR276W	YBR032W	P38223	100 aa		0.59	□□□□□ -2.31
CAF20	YOR276W	EDC1	P53080	175 aa	Predicted RBP	0.59	□□□□□ -2.31
CAF20	YOR276W	APC1	P53886	1748 aa		0.58	□□□□□ -2.32
CAF20	YOR276W	YGR121W-A	Q3E816	71 aa		0.58	□□□□□ -2.32
CAF20	YOR276W	UFD4	P33202	1483 aa		0.58	□□□□□ -2.32
CAF20	YOR276W	SWM2	P40342	146 aa		0.57	□□□□□ -2.32
CAF20	YOR276W	TY1B-NL2	Q99337	1749 aa	Known RBP	0.57	□□□□□ -2.32
CAF20	YOR276W	PEP1	P32319	1579 aa		0.57	□□□□□ -2.32
CAF20	YOR276W	HIR3	P47171	1648 aa		0.56	□□□□□ -2.32
CAF20	YOR276W	YCF1	P39109	1515 aa	Known RBP	0.56	□□□□□ -2.32
CAF20	YOR276W	SCC2	Q04002	1493 aa		0.55	□□□□□ -2.32
CAF20	YOR276W	THO2	P53552	1597 aa	Known RBP	0.55	□□□□□ -2.32
CAF20	YOR276W	TY1B-DR4	Q07793	1604 aa		0.55	□□□□□ -2.32
CAF20	YOR276W	RPO31	P04051	1460 aa		0.54	□□□□□ -2.32
CAF20	YOR276W	NUP159	P40477	1460 aa		0.54	□□□□□ -2.32
CAF20	YOR276W	DNF1	P32660	1571 aa		0.54	□□□□□ -2.32
CAF20	YOR276W	YDR119W-A	Q2V2P9	66 aa		0.54	□□□□□ -2.32
CAF20	YOR276W	VPS15	P22219	1454 aa		0.54	□□□□□ -2.32
CAF20	YOR276W	CDC25	P04821	1589 aa		0.53	□□□□□ -2.32
CAF20	YOR276W	QCR9	P22289	66 aa		0.53	□□□□□ -2.32
CAF20	YOR276W	TY2B-LR1	P0C2J3	1770 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	TY2B-F	P0CX63	1770 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	TY2B-GR2	P0CX64	1770 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	TY2B-DR2	Q03494	1770 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	TY2B-OR1	Q12113	1770 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	TY2B-B	Q12491	1770 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	TY2B-OR2	Q12501	1770 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	YGR025W	P53216	100 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	IQG1	Q12280	1495 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	SSK2	P53599	1579 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	ATG2	P53855	1592 aa		0.52	□□□□□ -2.33
CAF20	YOR276W	DOP1	Q03921	1698 aa		0.51	□□□□□ -2.33
CAF20	YOR276W	RKR1	Q04781	1562 aa		0.51	□□□□□ -2.33
CAF20	YOR276W	SMC4	Q12267	1418 aa		0.51	□□□□□ -2.33
CAF20	YOR276W	YGR035W-A	Q45U48	73 aa		0.51	□□□□□ -2.33
CAF20	YOR276W	NUP170	P38181	1502 aa		0.5	□□□□□ -2.33
CAF20	YOR276W	STU1	P38198	1513 aa		0.5	□□□□□ -2.33
CAF20	YOR276W	PDR15	Q04182	1529 aa	Known RBP	0.5	□□□□□ -2.33
CAF20	YOR276W	TY3B-G	Q99315	1547 aa		0.5	□□□□□ -2.33
CAF20	YOR276W	MYO4	P32492	1471 aa		0.5	□□□□□ -2.33
CAF20	YOR276W	LSM2	P38203	95 aa	Known RBP	0.5	□□□□□ -2.33
CAF20	YOR276W	YHR213W-A	Q8TGT4	77 aa		0.5	□□□□□ -2.33
CAF20	YOR276W	TY2B-DR3	Q07791	1770 aa	Known RBP	0.5	□□□□□ -2.33
CAF20	YOR276W	IRC20	Q06554	1556 aa		0.49	□□□□□ -2.33
CAF20	YOR276W	VTH1	P40438	1549 aa		0.49	□□□□□ -2.33
CAF20	YOR276W	VTH2	P40890	1549 aa		0.49	□□□□□ -2.33
CAF20	YOR276W	PDR5	P33302	1511 aa	Known RBP	0.48	□□□□□ -2.33
CAF20	YOR276W	BUD3	P25558	1636 aa		0.48	□□□□□ -2.33
CAF20	YOR276W	YOR093C	Q12275	1648 aa		0.48	□□□□□ -2.33
CAF20	YOR276W	HAP1	P0CE41	1502 aa		0.48	□□□□□ -2.33
CAF20	YOR276W	SNQ2	P32568	1501 aa	Known RBP	0.48	□□□□□ -2.33
CAF20	YOR276W	BCK1	Q01389	1478 aa		0.48	□□□□□ -2.33
CAF20	YOR276W	DNF2	Q12675	1612 aa		0.47	□□□□□ -2.33
CAF20	YOR276W	TIM12	P32830	109 aa		0.47	□□□□□ -2.33
CAF20	YOR276W	ATP17	Q06405	101 aa		0.47	□□□□□ -2.33
CAF20	YOR276W	ARO1	P08566	1588 aa	Known RBP	0.47	□□□□□ -2.33
CAF20	YOR276W	VMR1	P38735	1592 aa		0.47	□□□□□ -2.33
CAF20	YOR276W	PDR12	Q02785	1511 aa		0.47	□□□□□ -2.33
CAF20	YOR276W	ULS1	Q08562	1619 aa		0.46	□□□□□ -2.34
CAF20	YOR276W	YBL044W	P38194	122 aa		0.46	□□□□□ -2.34
CAF20	YOR276W	PAU7	P39545	55 aa		0.46	□□□□□ -2.34
CAF20	YOR276W	YDR034W-B	Q6Q5X2	51 aa		0.46	□□□□□ -2.34
CAF20	YOR276W	IML1	P47170	1584 aa		0.45	□□□□□ -2.34
CAF20	YOR276W	YLR146W-A	Q2V2P1	62 aa		0.45	□□□□□ -2.34
CAF20	YOR276W	YOR032W-A	Q8TGS1	66 aa		0.45	□□□□□ -2.34
CAF20	YOR276W	SPO14	P36126	1683 aa		0.45	□□□□□ -2.34
CAF20	YOR276W	SEN1	Q00416	2231 aa	Known RBP	0.44	□□□□□ -2.34
CAF20	YOR276W	YDR524C-B	Q3E6R4	66 aa		0.44	□□□□□ -2.34
CAF20	YOR276W	YKL018C-A	Q3E7A7	99 aa		0.44	□□□□□ -2.34
CAF20	YOR276W	YCR108C	Q3E819	63 aa		0.44	□□□□□ -2.34
CAF20	YOR276W	PAI3	P01094	68 aa		0.43	□□□□□ -2.34
CAF20	YOR276W	CUP1-1	P0CX80	61 aa		0.43	□□□□□ -2.34
CAF20	YOR276W	CUP1-2	P0CX81	61 aa		0.43	□□□□□ -2.34
CAF20	YOR276W	RPO21	P04050	1733 aa	Known RBP	0.43	□□□□□ -2.34
CAF20	YOR276W	YBT1	P32386	1661 aa		0.42	□□□□□ -2.34
CAF20	YOR276W	MLP2	P40457	1679 aa		0.42	□□□□□ -2.34
CAF20	YOR276W	GCN2	P15442	1659 aa		0.41	□□□□□ -2.34
CAF20	YOR276W	SSS1	P35179	80 aa		0.41	□□□□□ -2.34
CAF20	YOR276W	FKS3	Q04952	1785 aa		0.4	□□□□□ -2.35
CAF20	YOR276W	OLI1	P61829	76 aa		0.4	□□□□□ -2.35
CAF20	YOR276W	YFL041W-A	Q3E817	63 aa		0.4	□□□□□ -2.35
CAF20	YOR276W	NUP188	P52593	1655 aa	Known RBP	0.4	□□□□□ -2.35
CAF20	YOR276W	SPI1	P40092	148 aa		0.39	□□□□□ -2.35
CAF20	YOR276W	ERI1	P62651	68 aa	Known RBP	0.39	□□□□□ -2.35
CAF20	YOR276W	CHC1	P22137	1653 aa	Known RBP	0.39	□□□□□ -2.35
CAF20	YOR276W	USO1	P25386	1790 aa		0.39	□□□□□ -2.35
CAF20	YOR276W	FLO1	P32768	1537 aa		0.38	□□□□□ -2.35
CAF20	YOR276W	NUP192	P47054	1683 aa		0.38	□□□□□ -2.35
CAF20	YOR276W	YBR056W-A	I2HB52	66 aa		0.38	□□□□□ -2.35
CAF20	YOR276W	YDR246W-A	Q3E763	66 aa		0.38	□□□□□ -2.35
CAF20	YOR276W	YIL046W-A	Q3E7Z4	54 aa		0.38	□□□□□ -2.35
CAF20	YOR276W	HUB1	Q6Q546	73 aa		0.38	□□□□□ -2.35
CAF20	YOR276W	RRP5	Q05022	1729 aa	Known RBP	0.38	□□□□□ -2.35
CAF20	YOR276W	YBL039W-B	P0C268	59 aa		0.37	□□□□□ -2.35
CAF20	YOR276W	RPS27A	P35997	82 aa	Known RBP	0.37	□□□□□ -2.35
CAF20	YOR276W	YBR200W-A	Q3E755	54 aa		0.37	□□□□□ -2.35
CAF20	YOR276W	YOR011W-A	Q3E807	68 aa		0.36	□□□□□ -2.35
CAF20	YOR276W	YOR394C-A	Q8TGJ0	55 aa		0.36	□□□□□ -2.35
CAF20	YOR276W	SIP18	P50263	79 aa		0.35	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 103.4 ms