RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W YJL009WP47078 108 aa1.47□□□□□ -2.17
TRM112YNR046W RPL37BP51402 88 aaKnown RBP1.47□□□□□ -2.17
TRM112YNR046W PAU20Q08322 120 aa1.47□□□□□ -2.17
TRM112YNR046W YIL156W-BQ2V2P4 73 aa1.47□□□□□ -2.17
TRM112YNR046W YGR240C-AQ3E786 66 aa1.47□□□□□ -2.17
TRM112YNR046W IRC20Q06554 1556 aa1.47□□□□□ -2.17
TRM112YNR046W RPS11AP0CX47 156 aaKnown RBP1.46□□□□□ -2.18
TRM112YNR046W RPS11BP0CX48 156 aaKnown RBP1.46□□□□□ -2.18
TRM112YNR046W NOP10Q6Q547 58 aaPredicted RBP1.46□□□□□ -2.18
TRM112YNR046W SEC16P48415 2195 aaKnown RBP1.46□□□□□ -2.18
TRM112YNR046W BCK1Q01389 1478 aa1.45□□□□□ -2.18
TRM112YNR046W DNF2Q12675 1612 aa1.45□□□□□ -2.18
TRM112YNR046W MGR2Q02889 113 aa1.45□□□□□ -2.18
TRM112YNR046W YGR035W-AQ45U48 73 aa1.45□□□□□ -2.18
TRM112YNR046W NUP188P52593 1655 aaKnown RBP1.45□□□□□ -2.18
TRM112YNR046W ARO1P08566 1588 aaKnown RBP1.44□□□□□ -2.18
TRM112YNR046W PEP1P32319 1579 aa1.44□□□□□ -2.18
TRM112YNR046W YSY6P38374 65 aa1.44□□□□□ -2.18
TRM112YNR046W ERI1P62651 68 aaKnown RBP1.44□□□□□ -2.18
TRM112YNR046W TY3B-GQ99315 1547 aa1.44□□□□□ -2.18
TRM112YNR046W YOR093CQ12275 1648 aa1.44□□□□□ -2.18
TRM112YNR046W DNF3Q12674 1656 aa1.43□□□□□ -2.18
TRM112YNR046W YLR255CO13574 117 aa1.43□□□□□ -2.18
TRM112YNR046W SPI1P40092 148 aa1.43□□□□□ -2.18
TRM112YNR046W PAU7P39545 55 aa1.42□□□□□ -2.18
TRM112YNR046W LCL1Q02786 101 aa1.42□□□□□ -2.18
TRM112YNR046W YHR213W-BQ8TGK1 99 aa1.42□□□□□ -2.18
TRM112YNR046W YDL022C-AP0C5L6 82 aa1.41□□□□□ -2.18
TRM112YNR046W YDR246W-AQ3E763 66 aa1.41□□□□□ -2.18
TRM112YNR046W YKL018C-AQ3E7A7 99 aa1.41□□□□□ -2.18
TRM112YNR046W HHY1P39982 102 aa1.4□□□□□ -2.19
TRM112YNR046W YIL086CP40503 102 aa1.4□□□□□ -2.19
TRM112YNR046W YOR032W-AQ8TGS1 66 aa1.4□□□□□ -2.19
TRM112YNR046W SNF2P22082 1703 aa1.4□□□□□ -2.19
TRM112YNR046W SHU1P38751 150 aa1.39□□□□□ -2.19
TRM112YNR046W YNL042W-BQ3E7Z2 85 aa1.39□□□□□ -2.19
TRM112YNR046W YMR122W-AQ3E842 84 aa1.39□□□□□ -2.19
TRM112YNR046W CHC1P22137 1653 aaKnown RBP1.39□□□□□ -2.19
TRM112YNR046W MVB12P42939 101 aa1.38□□□□□ -2.19
TRM112YNR046W SGF11Q03067 99 aa1.38□□□□□ -2.19
TRM112YNR046W YKL023C-AQ2V2P3 75 aa1.38□□□□□ -2.19
TRM112YNR046W YBR201C-AQ2V2Q3 67 aa1.38□□□□□ -2.19
TRM112YNR046W YOR034C-AQ3E735 80 aa1.38□□□□□ -2.19
TRM112YNR046W MLP2P40457 1679 aa1.38□□□□□ -2.19
TRM112YNR046W THO2P53552 1597 aaKnown RBP1.38□□□□□ -2.19
TRM112YNR046W URA2P07259 2214 aaKnown RBP1.38□□□□□ -2.19
TRM112YNR046W STU1P38198 1513 aa1.37□□□□□ -2.19
TRM112YNR046W Q0032Q9ZZX7 96 aa1.37□□□□□ -2.19
TRM112YNR046W VMR1P38735 1592 aa1.36□□□□□ -2.19
TRM112YNR046W YNL190WP53872 204 aa1.36□□□□□ -2.19
TRM112YNR046W ATP17Q06405 101 aa1.36□□□□□ -2.19
TRM112YNR046W YDR182W-AQ3E796 67 aa1.36□□□□□ -2.19
TRM112YNR046W HUG1Q6Q5K6 68 aa1.36□□□□□ -2.19
TRM112YNR046W NUP170P38181 1502 aa1.35□□□□□ -2.19
TRM112YNR046W ATP18P81450 59 aa1.35□□□□□ -2.19
TRM112YNR046W RPS30AP0CX33 63 aaKnown RBP1.34□□□□□ -2.19
TRM112YNR046W RPS30BP0CX34 63 aaKnown RBP1.34□□□□□ -2.19
TRM112YNR046W YJR128WP47162 119 aa1.34□□□□□ -2.19
TRM112YNR046W EDC1P53080 175 aaPredicted RBP1.34□□□□□ -2.19
TRM112YNR046W NUP192P47054 1683 aa1.34□□□□□ -2.19
TRM112YNR046W SDH6Q3E785 79 aa1.33□□□□□ -2.2
TRM112YNR046W COX7P10174 60 aa1.32□□□□□ -2.2
TRM112YNR046W YMR141CP40211 102 aa1.32□□□□□ -2.2
TRM112YNR046W YOL097W-AQ3E7Y9 61 aa1.32□□□□□ -2.2
TRM112YNR046W HUB1Q6Q546 73 aa1.32□□□□□ -2.2
TRM112YNR046W HKR1P41809 1802 aa1.31□□□□□ -2.2
TRM112YNR046W RKR1Q04781 1562 aa1.31□□□□□ -2.2
TRM112YNR046W YOL166W-AQ8TGJ1 51 aa1.31□□□□□ -2.2
TRM112YNR046W YOR192C-CQ3E736 78 aa1.3□□□□□ -2.2
TRM112YNR046W YLR146W-AQ2V2P1 62 aa1.29□□□□□ -2.2
TRM112YNR046W YPR108W-AQ3E7B3 70 aa1.29□□□□□ -2.2
TRM112YNR046W PDR15Q04182 1529 aaKnown RBP1.28□□□□□ -2.2
TRM112YNR046W KOG1P38873 1557 aa1.28□□□□□ -2.2
TRM112YNR046W SMX2P40204 77 aaKnown RBP1.27□□□□□ -2.21
TRM112YNR046W RPC10P40422 70 aa1.27□□□□□ -2.21
TRM112YNR046W RPL38P49167 78 aaKnown RBP1.27□□□□□ -2.21
TRM112YNR046W YJR107C-AP0CT86 78 aa1.26□□□□□ -2.21
TRM112YNR046W HIR3P47171 1648 aa1.26□□□□□ -2.21
TRM112YNR046W YBL039W-BP0C268 59 aa1.25□□□□□ -2.21
TRM112YNR046W YBR032WP38223 100 aa1.25□□□□□ -2.21
TRM112YNR046W YBR072C-AQ3E794 53 aa1.25□□□□□ -2.21
TRM112YNR046W YMR001C-AQ8TGS9 76 aa1.25□□□□□ -2.21
TRM112YNR046W YLR157W-DP0CE99 70 aa1.24□□□□□ -2.21
TRM112YNR046W YBR200W-AQ3E755 54 aa1.24□□□□□ -2.21
TRM112YNR046W AUA1P32450 94 aa1.23□□□□□ -2.21
TRM112YNR046W YOR011W-AQ3E807 68 aa1.22□□□□□ -2.21
TRM112YNR046W BUD3P25558 1636 aa1.22□□□□□ -2.21
TRM112YNR046W GCN2P15442 1659 aa1.21□□□□□ -2.22
TRM112YNR046W RPL43AP0CX25 92 aaKnown RBP1.21□□□□□ -2.22
TRM112YNR046W RPL43BP0CX26 92 aa1.21□□□□□ -2.22
TRM112YNR046W ATG2P53855 1592 aa1.21□□□□□ -2.22
TRM112YNR046W YOR394C-AQ8TGJ0 55 aa1.19□□□□□ -2.22
TRM112YNR046W YGR025WP53216 100 aa1.17□□□□□ -2.22
TRM112YNR046W OLI1P61829 76 aa1.17□□□□□ -2.22
TRM112YNR046W YLR307C-AQ3E825 87 aa1.17□□□□□ -2.22
TRM112YNR046W FIG2P25653 1609 aa1.17□□□□□ -2.22
TRM112YNR046W SEN1Q00416 2231 aaKnown RBP1.16□□□□□ -2.22
TRM112YNR046W RPS27AP35997 82 aaKnown RBP1.15□□□□□ -2.23
TRM112YNR046W YLR157W-EP0CF00 54 aa1.14□□□□□ -2.23
TRM112YNR046W YOL164W-AQ3E7A5 60 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms