RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W YKL018C-AQ3E7A7 99 aa0.63□□□□□ -2.31
YLR400WYLR400W YHR213W-AQ8TGT4 77 aa0.63□□□□□ -2.31
YLR400WYLR400W ESP1Q03018 1630 aa0.63□□□□□ -2.31
YLR400WYLR400W EDC1P53080 175 aaPredicted RBP0.62□□□□□ -2.31
YLR400WYLR400W YGR035W-AQ45U48 73 aa0.62□□□□□ -2.31
YLR400WYLR400W PMD1P32634 1753 aa0.62□□□□□ -2.31
YLR400WYLR400W TAO3P40468 2376 aa0.62□□□□□ -2.31
YLR400WYLR400W YOR032W-AQ8TGS1 66 aa0.61□□□□□ -2.31
YLR400WYLR400W ATP17Q06405 101 aa0.59□□□□□ -2.31
YLR400WYLR400W YLR146W-AQ2V2P1 62 aa0.56□□□□□ -2.32
YLR400WYLR400W TY1B-NL2Q99337 1749 aaKnown RBP0.55□□□□□ -2.32
YLR400WYLR400W TY2B-LR1P0C2J3 1770 aa0.55□□□□□ -2.32
YLR400WYLR400W TY2B-FP0CX63 1770 aa0.55□□□□□ -2.32
YLR400WYLR400W TY2B-GR2P0CX64 1770 aa0.55□□□□□ -2.32
YLR400WYLR400W TY2B-DR2Q03494 1770 aa0.55□□□□□ -2.32
YLR400WYLR400W TY2B-OR1Q12113 1770 aa0.55□□□□□ -2.32
YLR400WYLR400W TY2B-BQ12491 1770 aa0.55□□□□□ -2.32
YLR400WYLR400W TY2B-OR2Q12501 1770 aa0.55□□□□□ -2.32
YLR400WYLR400W SEN1Q00416 2231 aaKnown RBP0.55□□□□□ -2.32
YLR400WYLR400W YCR108CQ3E819 63 aa0.55□□□□□ -2.32
YLR400WYLR400W YBL044WP38194 122 aa0.54□□□□□ -2.32
YLR400WYLR400W PAU7P39545 55 aa0.54□□□□□ -2.32
YLR400WYLR400W TY2B-DR3Q07791 1770 aaKnown RBP0.53□□□□□ -2.32
YLR400WYLR400W PAI3P01094 68 aa0.52□□□□□ -2.33
YLR400WYLR400W NUP159P40477 1460 aa0.52□□□□□ -2.33
YLR400WYLR400W UFD4P33202 1483 aa0.51□□□□□ -2.33
YLR400WYLR400W YGR025WP53216 100 aa0.51□□□□□ -2.33
YLR400WYLR400W APC1P53886 1748 aa0.51□□□□□ -2.33
YLR400WYLR400W SSS1P35179 80 aa0.5□□□□□ -2.33
YLR400WYLR400W ERI1P62651 68 aaKnown RBP0.5□□□□□ -2.33
YLR400WYLR400W SMC4Q12267 1418 aa0.49□□□□□ -2.33
YLR400WYLR400W DOP1Q03921 1698 aa0.49□□□□□ -2.33
YLR400WYLR400W YBR200W-AQ3E755 54 aa0.48□□□□□ -2.33
YLR400WYLR400W RPS27AP35997 82 aaKnown RBP0.47□□□□□ -2.33
YLR400WYLR400W YFL041W-AQ3E817 63 aa0.47□□□□□ -2.33
YLR400WYLR400W YBL039W-BP0C268 59 aa0.46□□□□□ -2.34
YLR400WYLR400W YDR246W-AQ3E763 66 aa0.45□□□□□ -2.34
YLR400WYLR400W SPI1P40092 148 aa0.44□□□□□ -2.34
YLR400WYLR400W MMS1Q06211 1407 aa0.44□□□□□ -2.34
YLR400WYLR400W OLI1P61829 76 aa0.43□□□□□ -2.34
YLR400WYLR400W YOR394C-AQ8TGJ0 55 aa0.43□□□□□ -2.34
YLR400WYLR400W YOR011W-AQ3E807 68 aa0.41□□□□□ -2.34
YLR400WYLR400W SIP18P50263 79 aa0.4□□□□□ -2.35
YLR400WYLR400W HUB1Q6Q546 73 aa0.4□□□□□ -2.35
YLR400WYLR400W IRC20Q06554 1556 aa0.4□□□□□ -2.35
YLR400WYLR400W DNF2Q12675 1612 aa0.38□□□□□ -2.35
YLR400WYLR400W TCB3Q03640 1545 aaKnown RBP0.38□□□□□ -2.35
YLR400WYLR400W KOG1P38873 1557 aa0.37□□□□□ -2.35
YLR400WYLR400W SCC2Q04002 1493 aa0.37□□□□□ -2.35
YLR400WYLR400W RPS30AP0CX33 63 aaKnown RBP0.37□□□□□ -2.35
YLR400WYLR400W RPS30BP0CX34 63 aaKnown RBP0.37□□□□□ -2.35
YLR400WYLR400W ARO1P08566 1588 aaKnown RBP0.36□□□□□ -2.35
YLR400WYLR400W YSY6P38374 65 aa0.36□□□□□ -2.35
YLR400WYLR400W IML1P47170 1584 aa0.35□□□□□ -2.35
YLR400WYLR400W FKS3Q04952 1785 aa0.34□□□□□ -2.35
YLR400WYLR400W YOL131WQ08270 108 aa0.34□□□□□ -2.36
YLR400WYLR400W DNF1P32660 1571 aa0.33□□□□□ -2.36
YLR400WYLR400W YDR182W-AQ3E796 67 aa0.33□□□□□ -2.36
YLR400WYLR400W IQG1Q12280 1495 aa0.33□□□□□ -2.36
YLR400WYLR400W TY3B-GQ99315 1547 aa0.32□□□□□ -2.36
YLR400WYLR400W YIL102C-AQ2V2P5 75 aa0.3□□□□□ -2.36
YLR400WYLR400W YOR008C-AQ3E7B9 74 aa0.3□□□□□ -2.36
YLR400WYLR400W YMR001C-AQ8TGS9 76 aa0.29□□□□□ -2.36
YLR400WYLR400W VPS15P22219 1454 aa0.29□□□□□ -2.36
YLR400WYLR400W HAP1P0CE41 1502 aa0.28□□□□□ -2.36
YLR400WYLR400W RPO21P04050 1733 aaKnown RBP0.27□□□□□ -2.37
YLR400WYLR400W RRP5Q05022 1729 aaKnown RBP0.27□□□□□ -2.37
YLR400WYLR400W VTH1P40438 1549 aa0.26□□□□□ -2.37
YLR400WYLR400W VTH2P40890 1549 aa0.26□□□□□ -2.37
YLR400WYLR400W MYO4P32492 1471 aa0.25□□□□□ -2.37
YLR400WYLR400W CUP1-1P0CX80 61 aa0.25□□□□□ -2.37
YLR400WYLR400W CUP1-2P0CX81 61 aa0.25□□□□□ -2.37
YLR400WYLR400W TOS6P48560 102 aa0.25□□□□□ -2.37
YLR400WYLR400W RPO31P04051 1460 aa0.23□□□□□ -2.37
YLR400WYLR400W YLR157W-DP0CE99 70 aa0.22□□□□□ -2.37
YLR400WYLR400W RPS27BP38711 82 aa0.22□□□□□ -2.37
YLR400WYLR400W YOL166W-AQ8TGJ1 51 aa0.22□□□□□ -2.37
YLR400WYLR400W YPR117WQ06116 2489 aa0.21□□□□□ -2.38
YLR400WYLR400W YBR056W-AI2HB52 66 aa0.21□□□□□ -2.38
YLR400WYLR400W RPS29AP41057 56 aaKnown RBP0.21□□□□□ -2.38
YLR400WYLR400W SPO14P36126 1683 aa0.19□□□□□ -2.38
YLR400WYLR400W NUM1Q00402 2748 aa0.19□□□□□ -2.38
YLR400WYLR400W UTP20P35194 2493 aaKnown RBP0.19□□□□□ -2.38
YLR400WYLR400W YFR010W-AP0C5N0 62 aa0.18□□□□□ -2.38
YLR400WYLR400W VMA9Q3E7B6 73 aa0.16□□□□□ -2.38
YLR400WYLR400W PDR15Q04182 1529 aaKnown RBP0.16□□□□□ -2.38
YLR400WYLR400W YBR230W-AQ3E762 66 aa0.15□□□□□ -2.39
YLR400WYLR400W FMP27Q06179 2628 aa0.14□□□□□ -2.39
YLR400WYLR400W VMR1P38735 1592 aa0.12□□□□□ -2.39
YLR400WYLR400W YGR146C-AQ8TGT9 53 aa0.12□□□□□ -2.39
YLR400WYLR400W TOR1P35169 2470 aa0.12□□□□□ -2.39
YLR400WYLR400W BCK1Q01389 1478 aa0.11□□□□□ -2.39
YLR400WYLR400W YOR192C-CQ3E736 78 aa0.1□□□□□ -2.39
YLR400WYLR400W GCN1P33892 2672 aaKnown RBP0.09□□□□□ -2.39
YLR400WYLR400W YLL006W-AQ3E814 58 aa0.09□□□□□ -2.4
YLR400WYLR400W IRA2P19158 3079 aa0.09□□□□□ -2.4
YLR400WYLR400W VPS13Q07878 3144 aa0.09□□□□□ -2.4
YLR400WYLR400W TOR2P32600 2474 aaKnown RBP0.08□□□□□ -2.4
YLR400WYLR400W GCN2P15442 1659 aa0.08□□□□□ -2.4
YLR400WYLR400W TEL1P38110 2787 aa0.07□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms