RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	YFR032C-B	Q8TGU2	87 aa		5.31	□□□□□ -1.56
AFG2	YLR397C	SIP18	P50263	79 aa		5.3	□□□□□ -1.56
AFG2	YLR397C	FYV12	Q08559	129 aa		5.3	□□□□□ -1.56
AFG2	YLR397C	YMR105W-A	Q8TGS8	64 aa		5.3	□□□□□ -1.56
AFG2	YLR397C	YCR095W-A	Q3E787	52 aa		5.29	□□□□□ -1.56
AFG2	YLR397C	YLL006W-A	Q3E814	58 aa		5.29	□□□□□ -1.56
AFG2	YLR397C	RPL39	P04650	51 aa		5.29	□□□□□ -1.56
AFG2	YLR397C	QCR10	P37299	77 aa		5.28	□□□□□ -1.56
AFG2	YLR397C	SPG1	P50088	95 aa		5.28	□□□□□ -1.56
AFG2	YLR397C	YGR045C	P53229	120 aa		5.28	□□□□□ -1.56
AFG2	YLR397C	RPS11A	P0CX47	156 aa	Known RBP	5.28	□□□□□ -1.56
AFG2	YLR397C	RPS11B	P0CX48	156 aa	Known RBP	5.28	□□□□□ -1.56
AFG2	YLR397C	YNL042W-B	Q3E7Z2	85 aa		5.27	□□□□□ -1.57
AFG2	YLR397C	CCW12	Q12127	133 aa		5.26	□□□□□ -1.57
AFG2	YLR397C	YDR524C-B	Q3E6R4	66 aa		5.26	□□□□□ -1.57
AFG2	YLR397C	YPR010C-A	A5Z2X5	72 aa		5.26	□□□□□ -1.57
AFG2	YLR397C	YBR219C	P38317	127 aa		5.25	□□□□□ -1.57
AFG2	YLR397C	ECM19	Q06011	112 aa		5.25	□□□□□ -1.57
AFG2	YLR397C	YIL046W-A	Q3E7Z4	54 aa		5.25	□□□□□ -1.57
AFG2	YLR397C	URA2	P07259	2214 aa	Known RBP	5.25	□□□□□ -1.57
AFG2	YLR397C	YKR073C	P36153	106 aa		5.25	□□□□□ -1.57
AFG2	YLR397C	YMR122W-A	Q3E842	84 aa		5.25	□□□□□ -1.57
AFG2	YLR397C	LEE1	Q02799	301 aa	Known RBP	5.24	□□□□□ -1.57
AFG2	YLR397C	IRA1	P18963	3092 aa		5.23	□□□□□ -1.57
AFG2	YLR397C	COX14	P39103	70 aa		5.22	□□□□□ -1.57
AFG2	YLR397C	YPL278C	Q08990	100 aa		5.22	□□□□□ -1.57
AFG2	YLR397C	MRPS8	Q03799	155 aa		5.22	□□□□□ -1.57
AFG2	YLR397C	COX23	P38824	151 aa		5.2	□□□□□ -1.58
AFG2	YLR397C	SOM1	Q05676	74 aa		5.2	□□□□□ -1.58
AFG2	YLR397C	YIL086C	P40503	102 aa		5.19	□□□□□ -1.58
AFG2	YLR397C	AQY2	P0CD90	149 aa		5.19	□□□□□ -1.58
AFG2	YLR397C	YLR157W-D	P0CE99	70 aa		5.18	□□□□□ -1.58
AFG2	YLR397C	VAM10	Q08474	114 aa		5.18	□□□□□ -1.58
AFG2	YLR397C	YOR011W-A	Q3E807	68 aa		5.18	□□□□□ -1.58
AFG2	YLR397C	LCL2	Q08045	131 aa		5.17	□□□□□ -1.58
AFG2	YLR397C	YBR182C-A	Q8TGU6	64 aa		5.15	□□□□□ -1.58
AFG2	YLR397C	MRX7	P53869	86 aa		5.14	□□□□□ -1.59
AFG2	YLR397C	YHR213W-B	Q8TGK1	99 aa		5.14	□□□□□ -1.59
AFG2	YLR397C	YMR001C-A	Q8TGS9	76 aa		5.14	□□□□□ -1.59
AFG2	YLR397C	YOL013W-A	P0C272	63 aa	Predicted RBP	5.14	□□□□□ -1.59
AFG2	YLR397C	YAR023C	D6VPM8	179 aa		5.13	□□□□□ -1.59
AFG2	YLR397C	FPR1	P20081	114 aa	Known RBP	5.13	□□□□□ -1.59
AFG2	YLR397C	CSF1	Q12150	2958 aa		5.13	□□□□□ -1.59
AFG2	YLR397C	MRPL39	P36533	70 aa		5.12	□□□□□ -1.59
AFG2	YLR397C	YDL241W	Q07738	123 aa		5.11	□□□□□ -1.59
AFG2	YLR397C	YGL149W	P53116	101 aa		5.11	□□□□□ -1.59
AFG2	YLR397C	HUB1	Q6Q546	73 aa		5.1	□□□□□ -1.59
AFG2	YLR397C	RTC6	O14464	93 aa		5.09	□□□□□ -1.59
AFG2	YLR397C	YNL122C	P53921	115 aa	Predicted RBP	5.09	□□□□□ -1.59
AFG2	YLR397C	SNA2	P56508	79 aa		5.09	□□□□□ -1.59
AFG2	YLR397C	SDH6	Q3E785	79 aa		5.09	□□□□□ -1.59
AFG2	YLR397C	HFA1	P32874	2273 aa		5.09	□□□□□ -1.59
AFG2	YLR397C	YCR043C	P25361	127 aa		5.09	□□□□□ -1.59
AFG2	YLR397C	EDC2	P40023	145 aa	Predicted RBP	5.09	□□□□□ -1.59
AFG2	YLR397C	BSC4	P53841	131 aa		5.09	□□□□□ -1.59
AFG2	YLR397C	YJL133C-A	Q3E7A3	74 aa		5.09	□□□□□ -1.59
AFG2	YLR397C	YHR125W	P38831	101 aa		5.06	□□□□□ -1.6
AFG2	YLR397C	Q0032	Q9ZZX7	96 aa		5.06	□□□□□ -1.6
AFG2	YLR397C	TRA1	P38811	3744 aa		5.05	□□□□□ -1.6
AFG2	YLR397C	YCR001W	P25347	104 aa		5.05	□□□□□ -1.6
AFG2	YLR397C	YBR027C	P38220	110 aa		5.05	□□□□□ -1.6
AFG2	YLR397C	YCL048W-A	Q2V2Q2	79 aa		5.05	□□□□□ -1.6
AFG2	YLR397C	ATP17	Q06405	101 aa		5.04	□□□□□ -1.6
AFG2	YLR397C	YNL162W-A	Q3E7A8	72 aa		5.03	□□□□□ -1.6
AFG2	YLR397C	PMP3	P87284	55 aa		5.03	□□□□□ -1.6
AFG2	YLR397C	AUA1	P32450	94 aa		5.02	□□□□□ -1.61
AFG2	YLR397C	IGD1	P43598	195 aa		5.02	□□□□□ -1.61
AFG2	YLR397C	MVB12	P42939	101 aa		5.01	□□□□□ -1.61
AFG2	YLR397C	YJL197C-A	P0C5P0	93 aa		5	□□□□□ -1.61
AFG2	YLR397C	YJL127C-B	Q3E828	52 aa		4.99	□□□□□ -1.61
AFG2	YLR397C	GCN1	P33892	2672 aa	Known RBP	4.99	□□□□□ -1.61
AFG2	YLR397C	YNL146C-A	Q3E7Z1	64 aa		4.98	□□□□□ -1.61
AFG2	YLR397C	YBR230W-A	Q3E762	66 aa		4.98	□□□□□ -1.61
AFG2	YLR397C	MRP10	O75012	95 aa		4.97	□□□□□ -1.61
AFG2	YLR397C	SGF11	Q03067	99 aa		4.97	□□□□□ -1.61
AFG2	YLR397C	RPL29	P05747	59 aa	Predicted RBP	4.96	□□□□□ -1.61
AFG2	YLR397C	YBL008W-A	Q3E821	79 aa		4.96	□□□□□ -1.62
AFG2	YLR397C	YGL014C-A	P0C5N1	53 aa		4.95	□□□□□ -1.62
AFG2	YLR397C	YAR064W	P39563	99 aa		4.94	□□□□□ -1.62
AFG2	YLR397C	YHR007C-A	Q07074	71 aa		4.89	□□□□□ -1.63
AFG2	YLR397C	YER078W-A	Q3E7A2	54 aa		4.89	□□□□□ -1.63
AFG2	YLR397C	TAR1	Q8TGM6	124 aa		4.89	□□□□□ -1.63
AFG2	YLR397C	PRP8	P33334	2413 aa	Known RBP	4.87	□□□□□ -1.63
AFG2	YLR397C	CMC4	Q3E7A9	73 aa		4.87	□□□□□ -1.63
AFG2	YLR397C	RPL43A	P0CX25	92 aa	Known RBP	4.86	□□□□□ -1.63
AFG2	YLR397C	RPL43B	P0CX26	92 aa		4.86	□□□□□ -1.63
AFG2	YLR397C	TMC1	Q08422	150 aa	Predicted RBP	4.86	□□□□□ -1.63
AFG2	YLR397C	YBL039W-B	P0C268	59 aa		4.85	□□□□□ -1.63
AFG2	YLR397C	YMR230W-A	Q3E7B5	62 aa		4.85	□□□□□ -1.63
AFG2	YLR397C	YDL012C	Q12489	107 aa		4.84	□□□□□ -1.64
AFG2	YLR397C	YDR210W	Q03482	75 aa		4.83	□□□□□ -1.64
AFG2	YLR397C	YCL042W	P25572	119 aa		4.82	□□□□□ -1.64
AFG2	YLR397C	YLR307C-A	Q3E825	87 aa		4.8	□□□□□ -1.64
AFG2	YLR397C	TAO3	P40468	2376 aa		4.78	□□□□□ -1.64
AFG2	YLR397C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
AFG2	YLR397C	DDR2	P89113	61 aa		4.77	□□□□□ -1.65
AFG2	YLR397C	YBR201C-A	Q2V2Q3	67 aa		4.77	□□□□□ -1.65
AFG2	YLR397C	YJR128W	P47162	119 aa		4.77	□□□□□ -1.65
AFG2	YLR397C	YOR072W	Q08486	104 aa		4.77	□□□□□ -1.65
AFG2	YLR397C	RPC10	P40422	70 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms