RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W FIT2Q08906 153 aa1.19□□□□□ -2.22
VPS38YLR360W YKL065W-AQ2V2P2 73 aa1.19□□□□□ -2.22
VPS38YLR360W YIL156W-BQ2V2P4 73 aa1.19□□□□□ -2.22
VPS38YLR360W NOP10Q6Q547 58 aaPredicted RBP1.19□□□□□ -2.22
VPS38YLR360W YOR032W-AQ8TGS1 66 aa1.19□□□□□ -2.22
VPS38YLR360W RPL36BO14455 100 aaKnown RBP1.18□□□□□ -2.22
VPS38YLR360W RPL36AP05745 100 aaPredicted RBP1.18□□□□□ -2.22
VPS38YLR360W RPS30AP0CX33 63 aaKnown RBP1.18□□□□□ -2.22
VPS38YLR360W RPS30BP0CX34 63 aaKnown RBP1.18□□□□□ -2.22
VPS38YLR360W CUP1-1P0CX80 61 aa1.18□□□□□ -2.22
VPS38YLR360W CUP1-2P0CX81 61 aa1.18□□□□□ -2.22
VPS38YLR360W MRPL38P35996 138 aaPredicted RBP1.18□□□□□ -2.22
VPS38YLR360W YMR141CP40211 102 aa1.18□□□□□ -2.22
VPS38YLR360W LIP1Q03579 150 aa1.18□□□□□ -2.22
VPS38YLR360W YDR182W-AQ3E796 67 aa1.18□□□□□ -2.22
VPS38YLR360W YJL197C-AP0C5P0 93 aa1.17□□□□□ -2.22
VPS38YLR360W ATP15P21306 62 aa1.17□□□□□ -2.22
VPS38YLR360W RRT1P38192 103 aa1.17□□□□□ -2.22
VPS38YLR360W YHL037CP38733 133 aa1.17□□□□□ -2.22
VPS38YLR360W TOS6P48560 102 aa1.17□□□□□ -2.22
VPS38YLR360W IRC21Q04772 201 aa1.17□□□□□ -2.22
VPS38YLR360W YOR034C-AQ3E735 80 aa1.17□□□□□ -2.22
VPS38YLR360W YAR023CD6VPM8 179 aa1.16□□□□□ -2.22
VPS38YLR360W HSP150P32478 413 aa1.16□□□□□ -2.22
VPS38YLR360W TVP23P38962 199 aa1.16□□□□□ -2.22
VPS38YLR360W RPL37AP49166 88 aaKnown RBP1.16□□□□□ -2.22
VPS38YLR360W DAD4P69851 72 aa1.16□□□□□ -2.22
VPS38YLR360W YDR010CQ12426 110 aa1.16□□□□□ -2.22
VPS38YLR360W RTC6O14464 93 aa1.15□□□□□ -2.22
VPS38YLR360W RPS11AP0CX47 156 aaKnown RBP1.15□□□□□ -2.22
VPS38YLR360W RPS11BP0CX48 156 aaKnown RBP1.15□□□□□ -2.22
VPS38YLR360W COX23P38824 151 aa1.15□□□□□ -2.22
VPS38YLR360W SPC1P46965 94 aa1.15□□□□□ -2.22
VPS38YLR360W MRX7P53869 86 aa1.15□□□□□ -2.22
VPS38YLR360W ATP18P81450 59 aa1.15□□□□□ -2.22
VPS38YLR360W YHR007C-AQ07074 71 aa1.15□□□□□ -2.22
VPS38YLR360W YDL241WQ07738 123 aa1.15□□□□□ -2.22
VPS38YLR360W CCW14O13547 238 aa1.15□□□□□ -2.23
VPS38YLR360W YJR107C-AP0CT86 78 aa1.15□□□□□ -2.23
VPS38YLR360W YGL149WP53116 101 aa1.15□□□□□ -2.23
VPS38YLR360W YPR013CQ12145 317 aa1.15□□□□□ -2.23
VPS38YLR360W YNL042W-BQ3E7Z2 85 aa1.15□□□□□ -2.23
VPS38YLR360W YFR009W-AP0C5M9 85 aa1.14□□□□□ -2.23
VPS38YLR360W POR2P40478 281 aa1.14□□□□□ -2.23
VPS38YLR360W RPL38P49167 78 aaKnown RBP1.14□□□□□ -2.23
VPS38YLR360W YGL258W-AQ3E740 77 aa1.14□□□□□ -2.23
VPS38YLR360W YCR095W-AQ3E787 52 aa1.14□□□□□ -2.23
VPS38YLR360W YLR342W-AQ3E810 57 aa1.14□□□□□ -2.23
VPS38YLR360W YPR117WQ06116 2489 aa1.13□□□□□ -2.23
VPS38YLR360W YSF3P0C074 85 aaPredicted RBP1.13□□□□□ -2.23
VPS38YLR360W AQY2P0CD90 149 aa1.13□□□□□ -2.23
VPS38YLR360W BSC4P53841 131 aa1.13□□□□□ -2.23
VPS38YLR360W CCW12Q12127 133 aa1.13□□□□□ -2.23
VPS38YLR360W YOR008C-AQ3E7B9 74 aa1.13□□□□□ -2.23
VPS38YLR360W YPR010C-AA5Z2X5 72 aa1.12□□□□□ -2.23
VPS38YLR360W YBR027CP38220 110 aa1.12□□□□□ -2.23
VPS38YLR360W YIL102CP40488 101 aa1.12□□□□□ -2.23
VPS38YLR360W SNA2P56508 79 aa1.12□□□□□ -2.23
VPS38YLR360W YDR210WQ03482 75 aa1.12□□□□□ -2.23
VPS38YLR360W YMR321CQ04898 105 aa1.12□□□□□ -2.23
VPS38YLR360W YCR001WP25347 104 aa1.11□□□□□ -2.23
VPS38YLR360W NCE101Q02820 53 aa1.11□□□□□ -2.23
VPS38YLR360W ATP17Q06405 101 aa1.11□□□□□ -2.23
VPS38YLR360W LCL2Q08045 131 aa1.11□□□□□ -2.23
VPS38YLR360W PRP8P33334 2413 aaKnown RBP1.1□□□□□ -2.23
VPS38YLR360W YGL014C-AP0C5N1 53 aa1.1□□□□□ -2.23
VPS38YLR360W YLR157W-DP0CE99 70 aa1.1□□□□□ -2.23
VPS38YLR360W YEL008WP40001 126 aa1.1□□□□□ -2.23
VPS38YLR360W VAM10Q08474 114 aa1.1□□□□□ -2.23
VPS38YLR360W CMC4Q3E7A9 73 aa1.1□□□□□ -2.23
VPS38YLR360W YLL006W-AQ3E814 58 aa1.1□□□□□ -2.23
VPS38YLR360W YMR122W-AQ3E842 84 aa1.1□□□□□ -2.23
VPS38YLR360W YOL013W-AP0C272 63 aaPredicted RBP1.09□□□□□ -2.24
VPS38YLR360W YGR025WP53216 100 aa1.09□□□□□ -2.24
VPS38YLR360W YNL122CP53921 115 aaPredicted RBP1.09□□□□□ -2.24
VPS38YLR360W YCL048W-AQ2V2Q2 79 aa1.09□□□□□ -2.24
VPS38YLR360W SDH6Q3E785 79 aa1.09□□□□□ -2.24
VPS38YLR360W HUB1Q6Q546 73 aa1.09□□□□□ -2.24
VPS38YLR360W YMR001C-AQ8TGS9 76 aa1.09□□□□□ -2.24
VPS38YLR360W MEC1P38111 2368 aa1.08□□□□□ -2.24
VPS38YLR360W TAO3P40468 2376 aa1.08□□□□□ -2.24
VPS38YLR360W YHR212W-AP0CX91 67 aa1.08□□□□□ -2.24
VPS38YLR360W TRA1P38811 3744 aa1.07□□□□□ -2.24
VPS38YLR360W SIP18P50263 79 aa1.07□□□□□ -2.24
VPS38YLR360W SGF11Q03067 99 aa1.07□□□□□ -2.24
VPS38YLR360W YBR200W-AQ3E755 54 aa1.07□□□□□ -2.24
VPS38YLR360W Q0032Q9ZZX7 96 aa1.07□□□□□ -2.24
VPS38YLR360W YCL042WP25572 119 aa1.06□□□□□ -2.24
VPS38YLR360W AUA1P32450 94 aa1.06□□□□□ -2.24
VPS38YLR360W RPS27AP35997 82 aaKnown RBP1.06□□□□□ -2.24
VPS38YLR360W RPS27BP38711 82 aa1.06□□□□□ -2.24
VPS38YLR360W YEL014CP39999 101 aa1.06□□□□□ -2.24
VPS38YLR360W RPL37BP51402 88 aaKnown RBP1.06□□□□□ -2.24
VPS38YLR360W YJL133C-AQ3E7A3 74 aa1.06□□□□□ -2.24
VPS38YLR360W YHR213W-BQ8TGK1 99 aa1.06□□□□□ -2.24
VPS38YLR360W IRA2P19158 3079 aa1.06□□□□□ -2.24
VPS38YLR360W TOR1P35169 2470 aa1.06□□□□□ -2.24
VPS38YLR360W UTP20P35194 2493 aaKnown RBP1.06□□□□□ -2.24
VPS38YLR360W GCN1P33892 2672 aaKnown RBP1.05□□□□□ -2.24
VPS38YLR360W YLR255CO13574 117 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms