RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W TY2B-CP25384 1770 aa-0.65□□□□□ -2.51
SMD2YLR275W TY2B-DR2Q03494 1770 aa-0.65□□□□□ -2.51
SMD2YLR275W TY2B-DR3Q07791 1770 aaKnown RBP-0.65□□□□□ -2.51
SMD2YLR275W TY2B-OR1Q12113 1770 aa-0.65□□□□□ -2.51
SMD2YLR275W TY2B-DR1Q12472 1770 aa-0.65□□□□□ -2.51
SMD2YLR275W TY2B-BQ12491 1770 aa-0.65□□□□□ -2.51
SMD2YLR275W TY2B-OR2Q12501 1770 aa-0.65□□□□□ -2.51
SMD2YLR275W YPR145C-AQ2V2P0 78 aa-0.65□□□□□ -2.51
SMD2YLR275W CWP2P43497 92 aa-0.67□□□□□ -2.52
SMD2YLR275W YDR182W-AQ3E796 67 aa-0.67□□□□□ -2.52
SMD2YLR275W APC1P53886 1748 aa-0.68□□□□□ -2.52
SMD2YLR275W SMC4Q12267 1418 aa-0.69□□□□□ -2.52
SMD2YLR275W RPS27AP35997 82 aaKnown RBP-0.69□□□□□ -2.52
SMD2YLR275W YKL018C-AQ3E7A7 99 aa-0.69□□□□□ -2.52
SMD2YLR275W LSM2P38203 95 aaKnown RBP-0.7□□□□□ -2.52
SMD2YLR275W SIN3P22579 1536 aa-0.71□□□□□ -2.52
SMD2YLR275W ESC1Q03661 1658 aaKnown RBP-0.72□□□□□ -2.52
SMD2YLR275W MMS22Q06164 1454 aa-0.72□□□□□ -2.52
SMD2YLR275W ATP17Q06405 101 aa-0.72□□□□□ -2.52
SMD2YLR275W YOR008C-AQ3E7B9 74 aa-0.72□□□□□ -2.52
SMD2YLR275W OLI1P61829 76 aa-0.73□□□□□ -2.53
SMD2YLR275W YLR146W-AQ2V2P1 62 aa-0.74□□□□□ -2.53
SMD2YLR275W QCR9P22289 66 aa-0.75□□□□□ -2.53
SMD2YLR275W YGR121W-AQ3E816 71 aa-0.75□□□□□ -2.53
SMD2YLR275W IRC20Q06554 1556 aa-0.75□□□□□ -2.53
SMD2YLR275W SWM2P40342 146 aa-0.76□□□□□ -2.53
SMD2YLR275W VTH1P40438 1549 aa-0.76□□□□□ -2.53
SMD2YLR275W VTH2P40890 1549 aa-0.76□□□□□ -2.53
SMD2YLR275W TOR1P35169 2470 aa-0.76□□□□□ -2.53
SMD2YLR275W SIP18P50263 79 aa-0.77□□□□□ -2.53
SMD2YLR275W YBR200W-AQ3E755 54 aa-0.78□□□□□ -2.53
SMD2YLR275W YOR394C-AQ8TGJ0 55 aa-0.79□□□□□ -2.54
SMD2YLR275W YGR035W-AQ45U48 73 aa-0.8□□□□□ -2.54
SMD2YLR275W YOR011W-AQ3E807 68 aa-0.81□□□□□ -2.54
SMD2YLR275W MLP1Q02455 1875 aaKnown RBP-0.82□□□□□ -2.54
SMD2YLR275W ESP1Q03018 1630 aa-0.82□□□□□ -2.54
SMD2YLR275W TOS6P48560 102 aa-0.82□□□□□ -2.54
SMD2YLR275W TY1B-NL2Q99337 1749 aaKnown RBP-0.82□□□□□ -2.54
SMD2YLR275W KOG1P38873 1557 aa-0.83□□□□□ -2.54
SMD2YLR275W YOR032W-AQ8TGS1 66 aa-0.84□□□□□ -2.54
SMD2YLR275W YBL039W-BP0C268 59 aa-0.86□□□□□ -2.55
SMD2YLR275W YBR056W-AI2HB52 66 aa-0.87□□□□□ -2.55
SMD2YLR275W SPO14P36126 1683 aa-0.88□□□□□ -2.55
SMD2YLR275W PAU7P39545 55 aa-0.89□□□□□ -2.55
SMD2YLR275W TY3B-GQ99315 1547 aa-0.92□□□□□ -2.56
SMD2YLR275W TIM12P32830 109 aa-0.92□□□□□ -2.56
SMD2YLR275W YDR119W-AQ2V2P9 66 aa-0.93□□□□□ -2.56
SMD2YLR275W RPO21P04050 1733 aaKnown RBP-0.93□□□□□ -2.56
SMD2YLR275W SSS1P35179 80 aa-0.96□□□□□ -2.56
SMD2YLR275W HAP1P0CE41 1502 aa-0.98□□□□□ -2.57
SMD2YLR275W HUB1Q6Q546 73 aa-1□□□□□ -2.57
SMD2YLR275W SKI3P17883 1432 aaKnown RBP-1.02□□□□□ -2.57
SMD2YLR275W SPI1P40092 148 aa-1.03□□□□□ -2.57
SMD2YLR275W RPS27BP38711 82 aa-1.04□□□□□ -2.58
SMD2YLR275W ERI1P62651 68 aaKnown RBP-1.04□□□□□ -2.58
SMD2YLR275W ARO1P08566 1588 aaKnown RBP-1.07□□□□□ -2.58
SMD2YLR275W UFD4P33202 1483 aa-1.09□□□□□ -2.58
SMD2YLR275W YHR213W-AQ8TGT4 77 aa-1.1□□□□□ -2.59
SMD2YLR275W FMP27Q06179 2628 aa-1.1□□□□□ -2.59
SMD2YLR275W FKS3Q04952 1785 aa-1.11□□□□□ -2.59
SMD2YLR275W YDR524C-BQ3E6R4 66 aa-1.12□□□□□ -2.59
SMD2YLR275W COA2Q3E823 68 aa-1.12□□□□□ -2.59
SMD2YLR275W YBR230W-AQ3E762 66 aa-1.14□□□□□ -2.59
SMD2YLR275W YLL006W-AQ3E814 58 aa-1.14□□□□□ -2.59
SMD2YLR275W YGR146C-AQ8TGT9 53 aa-1.15□□□□□ -2.59
SMD2YLR275W DNF2Q12675 1612 aa-1.15□□□□□ -2.59
SMD2YLR275W IML1P47170 1584 aa-1.16□□□□□ -2.59
SMD2YLR275W YHR050W-AQ05451 56 aa-1.16□□□□□ -2.6
SMD2YLR275W DOP1Q03921 1698 aa-1.16□□□□□ -2.6
SMD2YLR275W RPS30AP0CX33 63 aaKnown RBP-1.17□□□□□ -2.6
SMD2YLR275W RPS30BP0CX34 63 aaKnown RBP-1.17□□□□□ -2.6
SMD2YLR275W YFL041W-AQ3E817 63 aa-1.17□□□□□ -2.6
SMD2YLR275W IQG1Q12280 1495 aa-1.18□□□□□ -2.6
SMD2YLR275W NUP159P40477 1460 aa-1.21□□□□□ -2.6
SMD2YLR275W YGL258W-AQ3E740 77 aa-1.22□□□□□ -2.6
SMD2YLR275W YPR117WQ06116 2489 aa-1.24□□□□□ -2.61
SMD2YLR275W TOR2P32600 2474 aaKnown RBP-1.25□□□□□ -2.61
SMD2YLR275W YSY6P38374 65 aa-1.26□□□□□ -2.61
SMD2YLR275W YOL131WQ08270 108 aa-1.27□□□□□ -2.61
SMD2YLR275W RRP5Q05022 1729 aaKnown RBP-1.28□□□□□ -2.61
SMD2YLR275W VPS15P22219 1454 aa-1.28□□□□□ -2.61
SMD2YLR275W BCK1Q01389 1478 aa-1.28□□□□□ -2.61
SMD2YLR275W RPO31P04051 1460 aa-1.29□□□□□ -2.62
SMD2YLR275W PAI3P01094 68 aa-1.29□□□□□ -2.62
SMD2YLR275W YLR157W-DP0CE99 70 aa-1.3□□□□□ -2.62
SMD2YLR275W PDR12Q02785 1511 aa-1.3□□□□□ -2.62
SMD2YLR275W YOR072W-BQ3E832 53 aa-1.33□□□□□ -2.62
SMD2YLR275W YOL166W-AQ8TGJ1 51 aa-1.33□□□□□ -2.62
SMD2YLR275W MEC1P38111 2368 aa-1.33□□□□□ -2.62
SMD2YLR275W SCC2Q04002 1493 aa-1.35□□□□□ -2.63
SMD2YLR275W PDR15Q04182 1529 aaKnown RBP-1.36□□□□□ -2.63
SMD2YLR275W VMR1P38735 1592 aa-1.38□□□□□ -2.63
SMD2YLR275W TEL1P38110 2787 aa-1.39□□□□□ -2.63
SMD2YLR275W YIL102C-AQ2V2P5 75 aa-1.4□□□□□ -2.63
SMD2YLR275W DNF1P32660 1571 aa-1.42□□□□□ -2.64
SMD2YLR275W TCB3Q03640 1545 aaKnown RBP-1.45□□□□□ -2.64
SMD2YLR275W SNQ2P32568 1501 aaKnown RBP-1.49□□□□□ -2.65
SMD2YLR275W MYO4P32492 1471 aa-1.51□□□□□ -2.65
SMD2YLR275W TY1B-DR4Q07793 1604 aa-1.55□□□□□ -2.66
SMD2YLR275W DYN1P36022 4092 aa-1.57□□□□□ -2.66
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms