RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W RPL39P04650 51 aa3.84□□□□□ -1.8
PWP1YLR196W TOS6P48560 102 aa3.84□□□□□ -1.8
PWP1YLR196W KRE9P39005 276 aa3.83□□□□□ -1.8
PWP1YLR196W SPC1P46965 94 aa3.83□□□□□ -1.8
PWP1YLR196W MRPS12P53732 153 aa3.83□□□□□ -1.8
PWP1YLR196W YNL190WP53872 204 aa3.83□□□□□ -1.8
PWP1YLR196W PRM7Q12459 698 aa3.83□□□□□ -1.8
PWP1YLR196W YIL156W-BQ2V2P4 73 aa3.83□□□□□ -1.8
PWP1YLR196W HOT13P36078 116 aa3.82□□□□□ -1.8
PWP1YLR196W YMR105W-AQ8TGS8 64 aa3.82□□□□□ -1.8
PWP1YLR196W YPR117WQ06116 2489 aa3.81□□□□□ -1.8
PWP1YLR196W COX23P38824 151 aa3.81□□□□□ -1.8
PWP1YLR196W ARC15P40518 154 aaRIP-Chip data3.81□□□□□ -1.8not detected
PWP1YLR196W MRX7P53869 86 aa3.81□□□□□ -1.8
PWP1YLR196W YDL241WQ07738 123 aa3.81□□□□□ -1.8
PWP1YLR196W BPH1P25356 2167 aa3.8□□□□□ -1.8
PWP1YLR196W RTC6O14464 93 aa3.8□□□□□ -1.8
PWP1YLR196W CCW14O13547 238 aa3.79□□□□□ -1.8
PWP1YLR196W YMR244WQ04018 355 aa3.79□□□□□ -1.8
PWP1YLR196W YCR095W-AQ3E787 52 aa3.79□□□□□ -1.8
PWP1YLR196W YDR010CQ12426 110 aa3.78□□□□□ -1.8
PWP1YLR196W YPR013CQ12145 317 aa3.78□□□□□ -1.8
PWP1YLR196W TRA1P38811 3744 aa3.77□□□□□ -1.81
PWP1YLR196W YJL027CP47063 138 aaPredicted RBP3.77□□□□□ -1.81
PWP1YLR196W YGL149WP53116 101 aa3.77□□□□□ -1.81
PWP1YLR196W YOR034C-AQ3E735 80 aa3.76□□□□□ -1.81
PWP1YLR196W YLR342W-AQ3E810 57 aa3.76□□□□□ -1.81
PWP1YLR196W YJR107C-AP0CT86 78 aa3.75□□□□□ -1.81
PWP1YLR196W RPS11AP0CX47 156 aaKnown RBP3.75□□□□□ -1.81
PWP1YLR196W RPS11BP0CX48 156 aaKnown RBP3.75□□□□□ -1.81
PWP1YLR196W POR2P40478 281 aa3.75□□□□□ -1.81
PWP1YLR196W YNL042W-BQ3E7Z2 85 aa3.75□□□□□ -1.81
PWP1YLR196W SNA2P56508 79 aa3.75□□□□□ -1.81
PWP1YLR196W URM1P40554 99 aaPredicted RBP3.74□□□□□ -1.81
PWP1YLR196W YGR025WP53216 100 aa3.74□□□□□ -1.81
PWP1YLR196W BSC4P53841 131 aa3.74□□□□□ -1.81
PWP1YLR196W COX14P39103 70 aa3.73□□□□□ -1.81
PWP1YLR196W YLR236CA0A023PZG4 107 aa3.73□□□□□ -1.81
PWP1YLR196W YOR008C-AQ3E7B9 74 aa3.73□□□□□ -1.81
PWP1YLR196W QCR8P08525 94 aa3.72□□□□□ -1.81
PWP1YLR196W IGD1P43598 195 aa3.72□□□□□ -1.81
PWP1YLR196W ATP18P81450 59 aa3.72□□□□□ -1.81
PWP1YLR196W YCL048W-AQ2V2Q2 79 aa3.72□□□□□ -1.81
PWP1YLR196W YLR122CQ12312 125 aa3.71□□□□□ -1.82
PWP1YLR196W HUB1Q6Q546 73 aa3.71□□□□□ -1.82
PWP1YLR196W YBR027CP38220 110 aa3.7□□□□□ -1.82
PWP1YLR196W YOL085CQ99345 113 aa3.7□□□□□ -1.82
PWP1YLR196W YCR001WP25347 104 aa3.69□□□□□ -1.82
PWP1YLR196W YBR219CP38317 127 aa3.69□□□□□ -1.82
PWP1YLR196W RPL38P49167 78 aaKnown RBP3.69□□□□□ -1.82
PWP1YLR196W YER078W-AQ3E7A2 54 aa3.69□□□□□ -1.82
PWP1YLR196W ATP17Q06405 101 aa3.68□□□□□ -1.82
PWP1YLR196W YFR009W-AP0C5M9 85 aa3.66□□□□□ -1.82
PWP1YLR196W ECM19Q06011 112 aa3.65□□□□□ -1.82
PWP1YLR196W CCW12Q12127 133 aa3.65□□□□□ -1.82
PWP1YLR196W AQY2P0CD90 149 aa3.64□□□□□ -1.83
PWP1YLR196W YHR125WP38831 101 aa3.64□□□□□ -1.83
PWP1YLR196W YGL260WP53056 76 aa3.64□□□□□ -1.83
PWP1YLR196W YBR200W-AQ3E755 54 aa3.64□□□□□ -1.83
PWP1YLR196W YJR146WP47174 117 aa3.64□□□□□ -1.83
PWP1YLR196W URA2P07259 2214 aaKnown RBP3.63□□□□□ -1.83
PWP1YLR196W YPR010C-AA5Z2X5 72 aa3.63□□□□□ -1.83
PWP1YLR196W YIL102CP40488 101 aa3.63□□□□□ -1.83
PWP1YLR196W YOR011W-AQ3E807 68 aa3.62□□□□□ -1.83
PWP1YLR196W YMR001C-AQ8TGS9 76 aa3.62□□□□□ -1.83
PWP1YLR196W YLR157W-DP0CE99 70 aa3.61□□□□□ -1.83
PWP1YLR196W CMC4Q3E7A9 73 aa3.61□□□□□ -1.83
PWP1YLR196W GCN1P33892 2672 aaKnown RBP3.6□□□□□ -1.83
PWP1YLR196W SDH6Q3E785 79 aa3.6□□□□□ -1.83
PWP1YLR196W TOR2P32600 2474 aaKnown RBP3.59□□□□□ -1.83
PWP1YLR196W YNL122CP53921 115 aaPredicted RBP3.59□□□□□ -1.83
PWP1YLR196W YDR210WQ03482 75 aa3.59□□□□□ -1.83
PWP1YLR196W LCL2Q08045 131 aa3.59□□□□□ -1.83
PWP1YLR196W YGL014C-AP0C5N1 53 aa3.58□□□□□ -1.84
PWP1YLR196W YEL014CP39999 101 aa3.58□□□□□ -1.84
PWP1YLR196W YEL008WP40001 126 aa3.58□□□□□ -1.84
PWP1YLR196W YNL146C-AQ3E7Z1 64 aa3.58□□□□□ -1.84
PWP1YLR196W YOL013W-AP0C272 63 aaPredicted RBP3.57□□□□□ -1.84
PWP1YLR196W YHR032W-AP0C5N6 59 aa3.57□□□□□ -1.84
PWP1YLR196W YJR085CP47131 105 aaKnown RBP3.54□□□□□ -1.84
PWP1YLR196W SGF11Q03067 99 aa3.54□□□□□ -1.84
PWP1YLR196W YMR122W-AQ3E842 84 aa3.54□□□□□ -1.84
PWP1YLR196W YBR056W-AI2HB52 66 aa3.53□□□□□ -1.84
PWP1YLR196W YPR195CQ06594 109 aa3.53□□□□□ -1.84
PWP1YLR196W TAR1Q8TGM6 124 aa3.53□□□□□ -1.84
PWP1YLR196W HOR7Q05827 59 aa3.53□□□□□ -1.85
PWP1YLR196W YLL006W-AQ3E814 58 aa3.53□□□□□ -1.85
PWP1YLR196W YDR115WQ04598 105 aa3.52□□□□□ -1.85
PWP1YLR196W TEL1P38110 2787 aa3.51□□□□□ -1.85
PWP1YLR196W VAM10Q08474 114 aa3.51□□□□□ -1.85
PWP1YLR196W PMP3P87284 55 aa3.5□□□□□ -1.85
PWP1YLR196W COX8P04039 78 aa3.49□□□□□ -1.85
PWP1YLR196W PRP8P33334 2413 aaKnown RBP3.48□□□□□ -1.85
PWP1YLR196W Q0032Q9ZZX7 96 aa3.47□□□□□ -1.85
PWP1YLR196W YDL012CQ12489 107 aa3.47□□□□□ -1.85
PWP1YLR196W YHR213W-BQ8TGK1 99 aa3.47□□□□□ -1.85
PWP1YLR196W Q0297Q9ZZV8 51 aa3.47□□□□□ -1.85
PWP1YLR196W YBL039W-BP0C268 59 aa3.44□□□□□ -1.86
PWP1YLR196W AUA1P32450 94 aa3.44□□□□□ -1.86
PWP1YLR196W RPL33BP41056 107 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms