RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C YBL044WP38194 122 aa0.12□□□□□ -2.39
RPL40BYKR094C YPR145C-AQ2V2P0 78 aa0.12□□□□□ -2.39
RPL40BYKR094C YDL022C-AP0C5L6 82 aa0.11□□□□□ -2.39
RPL40BYKR094C YGR121W-AQ3E816 71 aa0.11□□□□□ -2.39
RPL40BYKR094C SIN3P22579 1536 aa0.1□□□□□ -2.39
RPL40BYKR094C QCR9P22289 66 aa0.1□□□□□ -2.39
RPL40BYKR094C LSM2P38203 95 aaKnown RBP0.1□□□□□ -2.39
RPL40BYKR094C ATP17Q06405 101 aa0.1□□□□□ -2.39
RPL40BYKR094C YDR246W-AQ3E763 66 aa0.1□□□□□ -2.39
RPL40BYKR094C YCR108CQ3E819 63 aa0.1□□□□□ -2.39
RPL40BYKR094C SMC4Q12267 1418 aa0.08□□□□□ -2.4
RPL40BYKR094C YDR119W-AQ2V2P9 66 aa0.08□□□□□ -2.4
RPL40BYKR094C YGR035W-AQ45U48 73 aa0.08□□□□□ -2.4
RPL40BYKR094C TY2B-LR1P0C2J3 1770 aa0.08□□□□□ -2.4
RPL40BYKR094C TY2B-FP0CX63 1770 aa0.08□□□□□ -2.4
RPL40BYKR094C TY2B-GR2P0CX64 1770 aa0.08□□□□□ -2.4
RPL40BYKR094C TY2B-DR2Q03494 1770 aa0.08□□□□□ -2.4
RPL40BYKR094C TY2B-OR1Q12113 1770 aa0.08□□□□□ -2.4
RPL40BYKR094C TY2B-BQ12491 1770 aa0.08□□□□□ -2.4
RPL40BYKR094C TY2B-OR2Q12501 1770 aa0.08□□□□□ -2.4
RPL40BYKR094C KOG1P38873 1557 aa0.07□□□□□ -2.4
RPL40BYKR094C IRC20Q06554 1556 aa0.06□□□□□ -2.4
RPL40BYKR094C TY2B-DR3Q07791 1770 aaKnown RBP0.06□□□□□ -2.4
RPL40BYKR094C UTP20P35194 2493 aaKnown RBP0.06□□□□□ -2.4
RPL40BYKR094C RPS29AP41057 56 aaKnown RBP0.06□□□□□ -2.4
RPL40BYKR094C OLI1P61829 76 aa0.06□□□□□ -2.4
RPL40BYKR094C TY1B-NL2Q99337 1749 aaKnown RBP0.05□□□□□ -2.4
RPL40BYKR094C RPS27AP35997 82 aaKnown RBP0.05□□□□□ -2.4
RPL40BYKR094C PAU7P39545 55 aa0.05□□□□□ -2.4
RPL40BYKR094C YKL018C-AQ3E7A7 99 aa0.05□□□□□ -2.4
RPL40BYKR094C YOR011W-AQ3E807 68 aa0.05□□□□□ -2.4
RPL40BYKR094C YHR213W-AQ8TGT4 77 aa0.05□□□□□ -2.4
RPL40BYKR094C DOP1Q03921 1698 aa0.05□□□□□ -2.4
RPL40BYKR094C RPO21P04050 1733 aaKnown RBP0.04□□□□□ -2.4
RPL40BYKR094C SPI1P40092 148 aa0.04□□□□□ -2.4
RPL40BYKR094C YLR146W-AQ2V2P1 62 aa0.04□□□□□ -2.4
RPL40BYKR094C ARO1P08566 1588 aaKnown RBP0.03□□□□□ -2.4
RPL40BYKR094C YBR200W-AQ3E755 54 aa0.03□□□□□ -2.4
RPL40BYKR094C YDR182W-AQ3E796 67 aa0.03□□□□□ -2.4
RPL40BYKR094C YOR008C-AQ3E7B9 74 aa0.03□□□□□ -2.4
RPL40BYKR094C HUB1Q6Q546 73 aa0.03□□□□□ -2.4
RPL40BYKR094C YOR394C-AQ8TGJ0 55 aa0.03□□□□□ -2.4
RPL40BYKR094C UFD4P33202 1483 aa0.03□□□□□ -2.41
RPL40BYKR094C IML1P47170 1584 aa0.02□□□□□ -2.41
RPL40BYKR094C YMR001C-AQ8TGS9 76 aa0.02□□□□□ -2.41
RPL40BYKR094C NUP159P40477 1460 aa0.02□□□□□ -2.41
RPL40BYKR094C VTH1P40438 1549 aa0.02□□□□□ -2.41
RPL40BYKR094C VTH2P40890 1549 aa0.02□□□□□ -2.41
RPL40BYKR094C TY3B-GQ99315 1547 aa0.02□□□□□ -2.41
RPL40BYKR094C YBL039W-BP0C268 59 aa0.01□□□□□ -2.41
RPL40BYKR094C TIM12P32830 109 aa0.01□□□□□ -2.41
RPL40BYKR094C YOR032W-AQ8TGS1 66 aa0.01□□□□□ -2.41
RPL40BYKR094C BCK1Q01389 1478 aa0.01□□□□□ -2.41
RPL40BYKR094C YFL041W-AQ3E817 63 aa0□□□□□ -2.41
RPL40BYKR094C RPO31P04051 1460 aa-0.01□□□□□ -2.41
RPL40BYKR094C SSS1P35179 80 aa-0.01□□□□□ -2.41
RPL40BYKR094C SIP18P50263 79 aa-0.01□□□□□ -2.41
RPL40BYKR094C TOS6P48560 102 aa-0.02□□□□□ -2.41
RPL40BYKR094C ERI1P62651 68 aaKnown RBP-0.02□□□□□ -2.41
RPL40BYKR094C FKS3Q04952 1785 aa-0.02□□□□□ -2.41
RPL40BYKR094C HAP1P0CE41 1502 aa-0.03□□□□□ -2.41
RPL40BYKR094C PAI3P01094 68 aa-0.03□□□□□ -2.41
RPL40BYKR094C TOR1P35169 2470 aa-0.03□□□□□ -2.41
RPL40BYKR094C DNF2Q12675 1612 aa-0.03□□□□□ -2.41
RPL40BYKR094C IQG1Q12280 1495 aa-0.03□□□□□ -2.41
RPL40BYKR094C SPO14P36126 1683 aa-0.04□□□□□ -2.42
RPL40BYKR094C SCC2Q04002 1493 aa-0.04□□□□□ -2.42
RPL40BYKR094C YSY6P38374 65 aa-0.06□□□□□ -2.42
RPL40BYKR094C YBR230W-AQ3E762 66 aa-0.06□□□□□ -2.42
RPL40BYKR094C VPS15P22219 1454 aa-0.06□□□□□ -2.42
RPL40BYKR094C VMR1P38735 1592 aa-0.06□□□□□ -2.42
RPL40BYKR094C RRP5Q05022 1729 aaKnown RBP-0.07□□□□□ -2.42
RPL40BYKR094C DNF1P32660 1571 aa-0.07□□□□□ -2.42
RPL40BYKR094C TCB3Q03640 1545 aaKnown RBP-0.08□□□□□ -2.42
RPL40BYKR094C COA2Q3E823 68 aa-0.08□□□□□ -2.42
RPL40BYKR094C PDR12Q02785 1511 aa-0.08□□□□□ -2.42
RPL40BYKR094C RPS30AP0CX33 63 aaKnown RBP-0.09□□□□□ -2.42
RPL40BYKR094C RPS30BP0CX34 63 aaKnown RBP-0.09□□□□□ -2.42
RPL40BYKR094C RPS27BP38711 82 aa-0.09□□□□□ -2.42
RPL40BYKR094C MYO4P32492 1471 aa-0.1□□□□□ -2.42
RPL40BYKR094C YIL102C-AQ2V2P5 75 aa-0.1□□□□□ -2.43
RPL40BYKR094C YDR524C-BQ3E6R4 66 aa-0.1□□□□□ -2.43
RPL40BYKR094C YOL131WQ08270 108 aa-0.12□□□□□ -2.43
RPL40BYKR094C YOL166W-AQ8TGJ1 51 aa-0.12□□□□□ -2.43
RPL40BYKR094C YGR146C-AQ8TGT9 53 aa-0.12□□□□□ -2.43
RPL40BYKR094C PDR15Q04182 1529 aaKnown RBP-0.13□□□□□ -2.43
RPL40BYKR094C YLR157W-DP0CE99 70 aa-0.14□□□□□ -2.43
RPL40BYKR094C TY1B-DR4Q07793 1604 aa-0.16□□□□□ -2.43
RPL40BYKR094C VMA9Q3E7B6 73 aa-0.18□□□□□ -2.44
RPL40BYKR094C YLL006W-AQ3E814 58 aa-0.18□□□□□ -2.44
RPL40BYKR094C YOR072W-BQ3E832 53 aa-0.19□□□□□ -2.44
RPL40BYKR094C YGL258W-AQ3E740 77 aa-0.2□□□□□ -2.44
RPL40BYKR094C SNQ2P32568 1501 aaKnown RBP-0.21□□□□□ -2.44
RPL40BYKR094C FMP27Q06179 2628 aa-0.21□□□□□ -2.44
RPL40BYKR094C YCF1P39109 1515 aaKnown RBP-0.22□□□□□ -2.44
RPL40BYKR094C YOR093CQ12275 1648 aa-0.22□□□□□ -2.44
RPL40BYKR094C YHR050W-AQ05451 56 aa-0.22□□□□□ -2.44
RPL40BYKR094C YKL023C-AQ2V2P3 75 aa-0.23□□□□□ -2.45
RPL40BYKR094C TOR2P32600 2474 aaKnown RBP-0.24□□□□□ -2.45
RPL40BYKR094C YBT1P32386 1661 aa-0.24□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms