RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W MLP1Q02455 1875 aaKnown RBP0.41□□□□□ -2.34
SPC42YKL042W YBL044WP38194 122 aa0.4□□□□□ -2.35
SPC42YKL042W SWM2P40342 146 aa0.39□□□□□ -2.35
SPC42YKL042W TY2B-CP25384 1770 aa0.38□□□□□ -2.35
SPC42YKL042W TY2B-DR1Q12472 1770 aa0.38□□□□□ -2.35
SPC42YKL042W TIM12P32830 109 aa0.38□□□□□ -2.35
SPC42YKL042W YGR035W-AQ45U48 73 aa0.38□□□□□ -2.35
SPC42YKL042W QCR9P22289 66 aa0.37□□□□□ -2.35
SPC42YKL042W TY1B-NL2Q99337 1749 aaKnown RBP0.36□□□□□ -2.35
SPC42YKL042W YHR213W-AQ8TGT4 77 aa0.36□□□□□ -2.35
SPC42YKL042W YOR032W-AQ8TGS1 66 aa0.35□□□□□ -2.35
SPC42YKL042W NUP159P40477 1460 aa0.35□□□□□ -2.35
SPC42YKL042W MMS1Q06211 1407 aa0.34□□□□□ -2.36
SPC42YKL042W YKL018C-AQ3E7A7 99 aa0.34□□□□□ -2.36
SPC42YKL042W LSM2P38203 95 aaKnown RBP0.33□□□□□ -2.36
SPC42YKL042W YDR246W-AQ3E763 66 aa0.32□□□□□ -2.36
SPC42YKL042W TY2B-LR1P0C2J3 1770 aa0.32□□□□□ -2.36
SPC42YKL042W TY2B-FP0CX63 1770 aa0.32□□□□□ -2.36
SPC42YKL042W TY2B-GR2P0CX64 1770 aa0.32□□□□□ -2.36
SPC42YKL042W TY2B-DR2Q03494 1770 aa0.32□□□□□ -2.36
SPC42YKL042W TY2B-OR1Q12113 1770 aa0.32□□□□□ -2.36
SPC42YKL042W TY2B-BQ12491 1770 aa0.32□□□□□ -2.36
SPC42YKL042W TY2B-OR2Q12501 1770 aa0.32□□□□□ -2.36
SPC42YKL042W DOP1Q03921 1698 aa0.31□□□□□ -2.36
SPC42YKL042W APC1P53886 1748 aa0.31□□□□□ -2.36
SPC42YKL042W ATP17Q06405 101 aa0.31□□□□□ -2.36
SPC42YKL042W UFD4P33202 1483 aa0.3□□□□□ -2.36
SPC42YKL042W TY2B-DR3Q07791 1770 aaKnown RBP0.3□□□□□ -2.36
SPC42YKL042W ERI1P62651 68 aaKnown RBP0.29□□□□□ -2.36
SPC42YKL042W RPS27AP35997 82 aaKnown RBP0.28□□□□□ -2.36
SPC42YKL042W PAI3P01094 68 aa0.26□□□□□ -2.37
SPC42YKL042W SPI1P40092 148 aa0.26□□□□□ -2.37
SPC42YKL042W YFL041W-AQ3E817 63 aa0.26□□□□□ -2.37
SPC42YKL042W TCB3Q03640 1545 aaKnown RBP0.26□□□□□ -2.37
SPC42YKL042W ARO1P08566 1588 aaKnown RBP0.25□□□□□ -2.37
SPC42YKL042W SSS1P35179 80 aa0.25□□□□□ -2.37
SPC42YKL042W PAU7P39545 55 aa0.25□□□□□ -2.37
SPC42YKL042W YBR200W-AQ3E755 54 aa0.25□□□□□ -2.37
SPC42YKL042W SCC2Q04002 1493 aa0.24□□□□□ -2.37
SPC42YKL042W SMC4Q12267 1418 aa0.24□□□□□ -2.37
SPC42YKL042W IRC20Q06554 1556 aa0.23□□□□□ -2.37
SPC42YKL042W YLR146W-AQ2V2P1 62 aa0.22□□□□□ -2.37
SPC42YKL042W DNF1P32660 1571 aa0.22□□□□□ -2.37
SPC42YKL042W DNF2Q12675 1612 aa0.21□□□□□ -2.38
SPC42YKL042W YBL039W-BP0C268 59 aa0.21□□□□□ -2.38
SPC42YKL042W YOR394C-AQ8TGJ0 55 aa0.21□□□□□ -2.38
SPC42YKL042W YOR011W-AQ3E807 68 aa0.19□□□□□ -2.38
SPC42YKL042W VPS15P22219 1454 aa0.18□□□□□ -2.38
SPC42YKL042W IML1P47170 1584 aa0.18□□□□□ -2.38
SPC42YKL042W HAP1P0CE41 1502 aa0.18□□□□□ -2.38
SPC42YKL042W TY3B-GQ99315 1547 aa0.18□□□□□ -2.38
SPC42YKL042W IQG1Q12280 1495 aa0.17□□□□□ -2.38
SPC42YKL042W RPS30AP0CX33 63 aaKnown RBP0.17□□□□□ -2.38
SPC42YKL042W RPS30BP0CX34 63 aaKnown RBP0.17□□□□□ -2.38
SPC42YKL042W KOG1P38873 1557 aa0.16□□□□□ -2.38
SPC42YKL042W FKS3Q04952 1785 aa0.15□□□□□ -2.39
SPC42YKL042W YSY6P38374 65 aa0.15□□□□□ -2.39
SPC42YKL042W OLI1P61829 76 aa0.15□□□□□ -2.39
SPC42YKL042W RPO31P04051 1460 aa0.15□□□□□ -2.39
SPC42YKL042W YOL131WQ08270 108 aa0.14□□□□□ -2.39
SPC42YKL042W HUB1Q6Q546 73 aa0.14□□□□□ -2.39
SPC42YKL042W YIL102C-AQ2V2P5 75 aa0.13□□□□□ -2.39
SPC42YKL042W MYO4P32492 1471 aa0.13□□□□□ -2.39
SPC42YKL042W YBR056W-AI2HB52 66 aa0.12□□□□□ -2.39
SPC42YKL042W RPS27BP38711 82 aa0.12□□□□□ -2.39
SPC42YKL042W YDR182W-AQ3E796 67 aa0.12□□□□□ -2.39
SPC42YKL042W YOL166W-AQ8TGJ1 51 aa0.12□□□□□ -2.39
SPC42YKL042W VTH1P40438 1549 aa0.12□□□□□ -2.39
SPC42YKL042W VTH2P40890 1549 aa0.12□□□□□ -2.39
SPC42YKL042W SIP18P50263 79 aa0.11□□□□□ -2.39
SPC42YKL042W RPO21P04050 1733 aaKnown RBP0.1□□□□□ -2.39
SPC42YKL042W YFR010W-AP0C5N0 62 aa0.1□□□□□ -2.39
SPC42YKL042W UTP20P35194 2493 aaKnown RBP0.1□□□□□ -2.39
SPC42YKL042W RRP5Q05022 1729 aaKnown RBP0.1□□□□□ -2.39
SPC42YKL042W TOS6P48560 102 aa0.07□□□□□ -2.4
SPC42YKL042W BCK1Q01389 1478 aa0.07□□□□□ -2.4
SPC42YKL042W PDR12Q02785 1511 aa0.07□□□□□ -2.4
SPC42YKL042W PDR15Q04182 1529 aaKnown RBP0.07□□□□□ -2.4
SPC42YKL042W VMR1P38735 1592 aa0.06□□□□□ -2.4
SPC42YKL042W YMR001C-AQ8TGS9 76 aa0.06□□□□□ -2.4
SPC42YKL042W YLR157W-DP0CE99 70 aa0.05□□□□□ -2.4
SPC42YKL042W YOR008C-AQ3E7B9 74 aa0.05□□□□□ -2.4
SPC42YKL042W RPS29AP41057 56 aaKnown RBP0.04□□□□□ -2.4
SPC42YKL042W VMA9Q3E7B6 73 aa0.03□□□□□ -2.4
SPC42YKL042W SPO14P36126 1683 aa0.02□□□□□ -2.41
SPC42YKL042W YOR192C-CQ3E736 78 aa0.01□□□□□ -2.41
SPC42YKL042W YGR146C-AQ8TGT9 53 aa-0.01□□□□□ -2.41
SPC42YKL042W YBR230W-AQ3E762 66 aa-0.02□□□□□ -2.41
SPC42YKL042W YBT1P32386 1661 aa-0.06□□□□□ -2.42
SPC42YKL042W CDC25P04821 1589 aa-0.06□□□□□ -2.42
SPC42YKL042W YLL006W-AQ3E814 58 aa-0.07□□□□□ -2.42
SPC42YKL042W TY1B-DR4Q07793 1604 aa-0.07□□□□□ -2.42
SPC42YKL042W YKL023C-AQ2V2P3 75 aa-0.08□□□□□ -2.42
SPC42YKL042W PDR5P33302 1511 aaKnown RBP-0.1□□□□□ -2.43
SPC42YKL042W TOR1P35169 2470 aa-0.1□□□□□ -2.43
SPC42YKL042W SNQ2P32568 1501 aaKnown RBP-0.11□□□□□ -2.43
SPC42YKL042W YCF1P39109 1515 aaKnown RBP-0.11□□□□□ -2.43
SPC42YKL042W SPT6P23615 1451 aaKnown RBP-0.12□□□□□ -2.43
SPC42YKL042W YDR524C-BQ3E6R4 66 aa-0.14□□□□□ -2.43
SPC42YKL042W YOR093CQ12275 1648 aa-0.15□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms