RNA–Protein interactions for RNA: YGR218W

CRM1, Transcript of Major karyopherin, yeastyeast

Gene CRM1, Length 3,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CRM1YGR218W TY2B-DR3Q07791 1770 aaKnown RBP0.54□□□□□ -2.32
CRM1YGR218W YNL198CP40166 100 aa0.53□□□□□ -2.32
CRM1YGR218W QCR9P22289 66 aa0.53□□□□□ -2.33
CRM1YGR218W ARO1P08566 1588 aaKnown RBP0.52□□□□□ -2.33
CRM1YGR218W TCB3Q03640 1545 aaKnown RBP0.52□□□□□ -2.33
CRM1YGR218W UFD4P33202 1483 aa0.52□□□□□ -2.33
CRM1YGR218W FKS3Q04952 1785 aa0.51□□□□□ -2.33
CRM1YGR218W LSM2P38203 95 aaKnown RBP0.51□□□□□ -2.33
CRM1YGR218W DNF1P32660 1571 aa0.51□□□□□ -2.33
CRM1YGR218W YBR016WP38216 128 aa0.51□□□□□ -2.33
CRM1YGR218W YOL097W-AQ3E7Y9 61 aa0.51□□□□□ -2.33
CRM1YGR218W TIM12P32830 109 aa0.51□□□□□ -2.33
CRM1YGR218W RPS29BP41058 56 aaKnown RBP0.51□□□□□ -2.33
CRM1YGR218W SDH6Q3E785 79 aa0.51□□□□□ -2.33
CRM1YGR218W YJR107C-AP0CT86 78 aa0.5□□□□□ -2.33
CRM1YGR218W SCC2Q04002 1493 aa0.5□□□□□ -2.33
CRM1YGR218W RRP5Q05022 1729 aaKnown RBP0.49□□□□□ -2.33
CRM1YGR218W SGF11Q03067 99 aa0.49□□□□□ -2.33
CRM1YGR218W PAI3P01094 68 aa0.49□□□□□ -2.33
CRM1YGR218W YPR108W-AQ3E7B3 70 aa0.48□□□□□ -2.33
CRM1YGR218W EDC1P53080 175 aaPredicted RBP0.47□□□□□ -2.33
CRM1YGR218W IML1P47170 1584 aa0.47□□□□□ -2.33
CRM1YGR218W ATP17Q06405 101 aa0.47□□□□□ -2.33
CRM1YGR218W YFL041W-AQ3E817 63 aa0.47□□□□□ -2.33
CRM1YGR218W YBR032WP38223 100 aa0.47□□□□□ -2.33
CRM1YGR218W YOR032W-AQ8TGS1 66 aa0.47□□□□□ -2.33
CRM1YGR218W SPI1P40092 148 aa0.46□□□□□ -2.34
CRM1YGR218W YFR009W-AP0C5M9 85 aa0.46□□□□□ -2.34
CRM1YGR218W DNF2Q12675 1612 aa0.46□□□□□ -2.34
CRM1YGR218W VPS15P22219 1454 aa0.45□□□□□ -2.34
CRM1YGR218W ATX1P38636 73 aa0.45□□□□□ -2.34
CRM1YGR218W ERI1P62651 68 aaKnown RBP0.45□□□□□ -2.34
CRM1YGR218W YDR246W-AQ3E763 66 aa0.45□□□□□ -2.34
CRM1YGR218W RPO31P04051 1460 aa0.45□□□□□ -2.34
CRM1YGR218W YKL018C-AQ3E7A7 99 aa0.45□□□□□ -2.34
CRM1YGR218W SSS1P35179 80 aa0.44□□□□□ -2.34
CRM1YGR218W RPO21P04050 1733 aaKnown RBP0.44□□□□□ -2.34
CRM1YGR218W PAU7P39545 55 aa0.44□□□□□ -2.34
CRM1YGR218W PDR12Q02785 1511 aa0.42□□□□□ -2.34
CRM1YGR218W IRC20Q06554 1556 aa0.42□□□□□ -2.34
CRM1YGR218W IQG1Q12280 1495 aa0.42□□□□□ -2.34
CRM1YGR218W MYO4P32492 1471 aa0.42□□□□□ -2.34
CRM1YGR218W YBL044WP38194 122 aa0.4□□□□□ -2.34
CRM1YGR218W YGR025WP53216 100 aa0.4□□□□□ -2.34
CRM1YGR218W YIL134C-AQ45U18 67 aa0.4□□□□□ -2.34
CRM1YGR218W KOG1P38873 1557 aa0.4□□□□□ -2.34
CRM1YGR218W SMC4Q12267 1418 aa0.4□□□□□ -2.35
CRM1YGR218W BPH1P25356 2167 aa0.4□□□□□ -2.35
CRM1YGR218W RPS27AP35997 82 aaKnown RBP0.4□□□□□ -2.35
CRM1YGR218W YBR200W-AQ3E755 54 aa0.4□□□□□ -2.35
CRM1YGR218W BCK1Q01389 1478 aa0.39□□□□□ -2.35
CRM1YGR218W VMR1P38735 1592 aa0.39□□□□□ -2.35
CRM1YGR218W TY3B-GQ99315 1547 aa0.39□□□□□ -2.35
CRM1YGR218W YOR011W-AQ3E807 68 aa0.38□□□□□ -2.35
CRM1YGR218W MMS1Q06211 1407 aa0.38□□□□□ -2.35
CRM1YGR218W YSY6P38374 65 aa0.38□□□□□ -2.35
CRM1YGR218W YOL131WQ08270 108 aa0.37□□□□□ -2.35
CRM1YGR218W YDR182W-AQ3E796 67 aa0.37□□□□□ -2.35
CRM1YGR218W SPO14P36126 1683 aa0.37□□□□□ -2.35
CRM1YGR218W YBL039W-BP0C268 59 aa0.37□□□□□ -2.35
CRM1YGR218W YFR010W-AP0C5N0 62 aa0.37□□□□□ -2.35
CRM1YGR218W HUB1Q6Q546 73 aa0.37□□□□□ -2.35
CRM1YGR218W HAP1P0CE41 1502 aa0.36□□□□□ -2.35
CRM1YGR218W YOR394C-AQ8TGJ0 55 aa0.36□□□□□ -2.35
CRM1YGR218W MDN1Q12019 4910 aaKnown RBP0.36□□□□□ -2.35
CRM1YGR218W YLR146W-AQ2V2P1 62 aa0.36□□□□□ -2.35
CRM1YGR218W YIL102C-AQ2V2P5 75 aa0.36□□□□□ -2.35
CRM1YGR218W RPS30AP0CX33 63 aaKnown RBP0.35□□□□□ -2.35
CRM1YGR218W RPS30BP0CX34 63 aaKnown RBP0.35□□□□□ -2.35
CRM1YGR218W TAO3P40468 2376 aa0.34□□□□□ -2.35
CRM1YGR218W VTH1P40438 1549 aa0.34□□□□□ -2.35
CRM1YGR218W VTH2P40890 1549 aa0.34□□□□□ -2.35
CRM1YGR218W YOL166W-AQ8TGJ1 51 aa0.34□□□□□ -2.36
CRM1YGR218W YBT1P32386 1661 aa0.33□□□□□ -2.36
CRM1YGR218W YCR108CQ3E819 63 aa0.33□□□□□ -2.36
CRM1YGR218W VMA9Q3E7B6 73 aa0.32□□□□□ -2.36
CRM1YGR218W OLI1P61829 76 aa0.31□□□□□ -2.36
CRM1YGR218W TY1B-DR4Q07793 1604 aa0.3□□□□□ -2.36
CRM1YGR218W PDR15Q04182 1529 aaKnown RBP0.3□□□□□ -2.36
CRM1YGR218W NUP188P52593 1655 aaKnown RBP0.29□□□□□ -2.36
CRM1YGR218W YMR001C-AQ8TGS9 76 aa0.28□□□□□ -2.36
CRM1YGR218W CDC25P04821 1589 aa0.28□□□□□ -2.36
CRM1YGR218W RPS27BP38711 82 aa0.28□□□□□ -2.36
CRM1YGR218W PDR5P33302 1511 aaKnown RBP0.28□□□□□ -2.36
CRM1YGR218W SEN1Q00416 2231 aaKnown RBP0.28□□□□□ -2.37
CRM1YGR218W YCF1P39109 1515 aaKnown RBP0.27□□□□□ -2.37
CRM1YGR218W MON2P48563 1636 aaPredicted RBP0.27□□□□□ -2.37
CRM1YGR218W YLR157W-DP0CE99 70 aa0.25□□□□□ -2.37
CRM1YGR218W SIP18P50263 79 aa0.25□□□□□ -2.37
CRM1YGR218W YKL023C-AQ2V2P3 75 aa0.25□□□□□ -2.37
CRM1YGR218W YOR093CQ12275 1648 aa0.24□□□□□ -2.37
CRM1YGR218W SPT6P23615 1451 aaKnown RBP0.24□□□□□ -2.37
CRM1YGR218W YBR230W-AQ3E762 66 aa0.23□□□□□ -2.37
CRM1YGR218W TOS6P48560 102 aa0.23□□□□□ -2.37
CRM1YGR218W YOR008C-AQ3E7B9 74 aa0.23□□□□□ -2.37
CRM1YGR218W USO1P25386 1790 aa0.22□□□□□ -2.37
CRM1YGR218W YOR192C-CQ3E736 78 aa0.22□□□□□ -2.37
CRM1YGR218W SNQ2P32568 1501 aaKnown RBP0.21□□□□□ -2.38
CRM1YGR218W RPS29AP41057 56 aaKnown RBP0.21□□□□□ -2.38
CRM1YGR218W SSK2P53599 1579 aa0.2□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms