RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeastyeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDR1YGR100W POR2P40478 281 aa3.35□□□□□ -1.87
MDR1YGR100W LEE1Q02799 301 aaKnown RBP3.35□□□□□ -1.87
MDR1YGR100W YKL065W-AQ2V2P2 73 aa3.35□□□□□ -1.87
MDR1YGR100W UTH1P36135 365 aa3.34□□□□□ -1.87
MDR1YGR100W YIL102CP40488 101 aa3.34□□□□□ -1.87
MDR1YGR100W LIP1Q03579 150 aa3.34□□□□□ -1.87
MDR1YGR100W YFR032C-BQ8TGU2 87 aa3.34□□□□□ -1.87
MDR1YGR100W YPR013CQ12145 317 aa3.34□□□□□ -1.87
MDR1YGR100W YLL006W-AQ3E814 58 aa3.34□□□□□ -1.87
MDR1YGR100W YOL014WQ08110 124 aa3.33□□□□□ -1.88
MDR1YGR100W FYV12Q08559 129 aa3.33□□□□□ -1.88
MDR1YGR100W MRPL39P36533 70 aa3.32□□□□□ -1.88
MDR1YGR100W YGR045CP53229 120 aa3.32□□□□□ -1.88
MDR1YGR100W QCR10P37299 77 aa3.31□□□□□ -1.88
MDR1YGR100W SPG1P50088 95 aa3.31□□□□□ -1.88
MDR1YGR100W YMR244WQ04018 355 aa3.31□□□□□ -1.88
MDR1YGR100W YCR095W-AQ3E787 52 aa3.31□□□□□ -1.88
MDR1YGR100W YBR219CP38317 127 aa3.31□□□□□ -1.88
MDR1YGR100W COX14P39103 70 aa3.31□□□□□ -1.88
MDR1YGR100W CCW12Q12127 133 aa3.3□□□□□ -1.88
MDR1YGR100W YOR011W-AQ3E807 68 aa3.3□□□□□ -1.88
MDR1YGR100W YMR122W-AQ3E842 84 aa3.3□□□□□ -1.88
MDR1YGR100W YNL042W-BQ3E7Z2 85 aa3.29□□□□□ -1.88
MDR1YGR100W RPS11AP0CX47 156 aaKnown RBP3.29□□□□□ -1.88
MDR1YGR100W RPS11BP0CX48 156 aaKnown RBP3.29□□□□□ -1.88
MDR1YGR100W VAM10Q08474 114 aa3.29□□□□□ -1.88
MDR1YGR100W YBR182C-AQ8TGU6 64 aa3.29□□□□□ -1.88
MDR1YGR100W YPR010C-AA5Z2X5 72 aa3.28□□□□□ -1.88
MDR1YGR100W ECM19Q06011 112 aa3.28□□□□□ -1.88
MDR1YGR100W YPL278CQ08990 100 aa3.28□□□□□ -1.88
MDR1YGR100W COX23P38824 151 aa3.27□□□□□ -1.89
MDR1YGR100W SOM1Q05676 74 aa3.27□□□□□ -1.89
MDR1YGR100W URA2P07259 2214 aaKnown RBP3.27□□□□□ -1.89
MDR1YGR100W MRPS8Q03799 155 aa3.26□□□□□ -1.89
MDR1YGR100W YHR213W-BQ8TGK1 99 aa3.24□□□□□ -1.89
MDR1YGR100W AQY2P0CD90 149 aa3.23□□□□□ -1.89
MDR1YGR100W YLR157W-DP0CE99 70 aa3.23□□□□□ -1.89
MDR1YGR100W IRA1P18963 3092 aa3.23□□□□□ -1.89
MDR1YGR100W PMP3P87284 55 aa3.23□□□□□ -1.89
MDR1YGR100W CSF1Q12150 2958 aa3.23□□□□□ -1.89
MDR1YGR100W YAR023CD6VPM8 179 aa3.22□□□□□ -1.89
MDR1YGR100W LCL2Q08045 131 aa3.22□□□□□ -1.89
MDR1YGR100W HFA1P32874 2273 aa3.22□□□□□ -1.89
MDR1YGR100W YGL149WP53116 101 aa3.22□□□□□ -1.89
MDR1YGR100W YCL048W-AQ2V2Q2 79 aa3.22□□□□□ -1.89
MDR1YGR100W MRX7P53869 86 aa3.22□□□□□ -1.89
MDR1YGR100W YDL241WQ07738 123 aa3.22□□□□□ -1.89
MDR1YGR100W YOL013W-AP0C272 63 aaPredicted RBP3.21□□□□□ -1.9
MDR1YGR100W EDC2P40023 145 aaPredicted RBP3.21□□□□□ -1.9
MDR1YGR100W YMR001C-AQ8TGS9 76 aa3.21□□□□□ -1.9
MDR1YGR100W YJL133C-AQ3E7A3 74 aa3.21□□□□□ -1.9
MDR1YGR100W YNL146C-AQ3E7Z1 64 aa3.21□□□□□ -1.9
MDR1YGR100W HUB1Q6Q546 73 aa3.21□□□□□ -1.9
MDR1YGR100W RTC6O14464 93 aa3.2□□□□□ -1.9
MDR1YGR100W SNA2P56508 79 aa3.2□□□□□ -1.9
MDR1YGR100W SDH6Q3E785 79 aa3.19□□□□□ -1.9
MDR1YGR100W YCR043CP25361 127 aa3.19□□□□□ -1.9
MDR1YGR100W MVB12P42939 101 aa3.18□□□□□ -1.9
MDR1YGR100W BSC4P53841 131 aa3.18□□□□□ -1.9
MDR1YGR100W YNL162W-AQ3E7A8 72 aa3.18□□□□□ -1.9
MDR1YGR100W YNL122CP53921 115 aaPredicted RBP3.18□□□□□ -1.9
MDR1YGR100W RPL29P05747 59 aaPredicted RBP3.17□□□□□ -1.9
MDR1YGR100W YHR125WP38831 101 aa3.17□□□□□ -1.9
MDR1YGR100W YJL127C-BQ3E828 52 aa3.16□□□□□ -1.9
MDR1YGR100W Q0032Q9ZZX7 96 aa3.16□□□□□ -1.9
MDR1YGR100W YBR230W-AQ3E762 66 aa3.15□□□□□ -1.9
MDR1YGR100W YCR001WP25347 104 aa3.15□□□□□ -1.91
MDR1YGR100W YBR027CP38220 110 aa3.15□□□□□ -1.91
MDR1YGR100W IGD1P43598 195 aa3.15□□□□□ -1.91
MDR1YGR100W ATP17Q06405 101 aa3.14□□□□□ -1.91
MDR1YGR100W TRA1P38811 3744 aa3.14□□□□□ -1.91
MDR1YGR100W AUA1P32450 94 aa3.14□□□□□ -1.91
MDR1YGR100W YBL008W-AQ3E821 79 aa3.13□□□□□ -1.91
MDR1YGR100W YJL197C-AP0C5P0 93 aa3.12□□□□□ -1.91
MDR1YGR100W TAR1Q8TGM6 124 aa3.12□□□□□ -1.91
MDR1YGR100W SGF11Q03067 99 aa3.11□□□□□ -1.91
MDR1YGR100W MRP10O75012 95 aa3.11□□□□□ -1.91
MDR1YGR100W YAR064WP39563 99 aa3.11□□□□□ -1.91
MDR1YGR100W YBL039W-BP0C268 59 aa3.1□□□□□ -1.91
MDR1YGR100W YGL014C-AP0C5N1 53 aa3.1□□□□□ -1.91
MDR1YGR100W YHR007C-AQ07074 71 aa3.08□□□□□ -1.92
MDR1YGR100W YER078W-AQ3E7A2 54 aa3.08□□□□□ -1.92
MDR1YGR100W GCN1P33892 2672 aaKnown RBP3.08□□□□□ -1.92
MDR1YGR100W CMC4Q3E7A9 73 aa3.07□□□□□ -1.92
MDR1YGR100W TAO3P40468 2376 aa3.07□□□□□ -1.92
MDR1YGR100W TMC1Q08422 150 aaPredicted RBP3.06□□□□□ -1.92
MDR1YGR100W HOR7Q05827 59 aa3.06□□□□□ -1.92
MDR1YGR100W RPC10P40422 70 aa3.05□□□□□ -1.92
MDR1YGR100W YLR307C-AQ3E825 87 aa3.05□□□□□ -1.92
MDR1YGR100W RPL43AP0CX25 92 aaKnown RBP3.04□□□□□ -1.92
MDR1YGR100W RPL43BP0CX26 92 aa3.04□□□□□ -1.92
MDR1YGR100W YMR230W-AQ3E7B5 62 aa3.03□□□□□ -1.92
MDR1YGR100W DDR2P89113 61 aa3.03□□□□□ -1.92
MDR1YGR100W YOR072WQ08486 104 aa3.02□□□□□ -1.93
MDR1YGR100W YCL042WP25572 119 aa3.01□□□□□ -1.93
MDR1YGR100W GIS2P53849 153 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
MDR1YGR100W YDR210WQ03482 75 aa3.01□□□□□ -1.93
MDR1YGR100W YDL012CQ12489 107 aa3.01□□□□□ -1.93
MDR1YGR100W YER175W-AQ8TGU4 54 aa3.01□□□□□ -1.93
MDR1YGR100W PRP8P33334 2413 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms