RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W CCW14O13547 238 aa2.12□□□□□ -2.07
LIF1YGL090W YPR096CO13587 100 aa2.12□□□□□ -2.07
LIF1YGL090W FPR2P32472 135 aa2.12□□□□□ -2.07
LIF1YGL090W LCL2Q08045 131 aa2.12□□□□□ -2.07
LIF1YGL090W PAU20Q08322 120 aa2.12□□□□□ -2.07
LIF1YGL090W CCW12Q12127 133 aa2.12□□□□□ -2.07
LIF1YGL090W YDR010CQ12426 110 aa2.12□□□□□ -2.07
LIF1YGL090W COX19Q3E731 98 aa2.12□□□□□ -2.07
LIF1YGL090W YHR173CP38864 112 aa2.11□□□□□ -2.07
LIF1YGL090W YEL008WP40001 126 aa2.11□□□□□ -2.07
LIF1YGL090W YDR524C-BQ3E6R4 66 aa2.11□□□□□ -2.07
LIF1YGL090W YGR240C-AQ3E786 66 aa2.11□□□□□ -2.07
LIF1YGL090W COA3Q3E7B2 85 aa2.11□□□□□ -2.07
LIF1YGL090W YGR121W-AQ3E816 71 aa2.11□□□□□ -2.07
LIF1YGL090W YBR219CP38317 127 aa2.1□□□□□ -2.07
LIF1YGL090W YSY6P38374 65 aa2.1□□□□□ -2.07
LIF1YGL090W YLR162WQ06235 118 aa2.1□□□□□ -2.07
LIF1YGL090W YNL146C-AQ3E7Z1 64 aa2.1□□□□□ -2.07
LIF1YGL090W PRP8P33334 2413 aaKnown RBP2.09□□□□□ -2.08
LIF1YGL090W IRA2P19158 3079 aa2.09□□□□□ -2.08
LIF1YGL090W YDL012CQ12489 107 aa2.08□□□□□ -2.08
LIF1YGL090W MOT1P32333 1867 aa2.07□□□□□ -2.08
LIF1YGL090W PAU7P39545 55 aa2.07□□□□□ -2.08
LIF1YGL090W SPI1P40092 148 aa2.07□□□□□ -2.08
LIF1YGL090W YJL009WP47078 108 aa2.07□□□□□ -2.08
LIF1YGL090W NOP10Q6Q547 58 aaPredicted RBP2.07□□□□□ -2.08
LIF1YGL090W RPS11AP0CX47 156 aaKnown RBP2.06□□□□□ -2.08
LIF1YGL090W RPS11BP0CX48 156 aaKnown RBP2.06□□□□□ -2.08
LIF1YGL090W YCL042WP25572 119 aa2.06□□□□□ -2.08
LIF1YGL090W MRPS12P53732 153 aa2.06□□□□□ -2.08
LIF1YGL090W YDR210WQ03482 75 aa2.06□□□□□ -2.08
LIF1YGL090W YIL156W-BQ2V2P4 73 aa2.06□□□□□ -2.08
LIF1YGL090W YGR035W-AQ45U48 73 aa2.05□□□□□ -2.08
LIF1YGL090W ACC1Q00955 2233 aaKnown RBP2.05□□□□□ -2.08
LIF1YGL090W IRA1P18963 3092 aa2.04□□□□□ -2.08
LIF1YGL090W CDC39P25655 2108 aaKnown RBP2.04□□□□□ -2.08
LIF1YGL090W SLH1P53327 1967 aaKnown RBP2.04□□□□□ -2.08
LIF1YGL090W ERI1P62651 68 aaKnown RBP2.04□□□□□ -2.08
LIF1YGL090W YKL023C-AQ2V2P3 75 aa2.04□□□□□ -2.08
LIF1YGL090W STT4P37297 1900 aa2.03□□□□□ -2.08
LIF1YGL090W YMR007WQ03675 126 aa2.03□□□□□ -2.08
LIF1YGL090W SGF11Q03067 99 aa2.02□□□□□ -2.09
LIF1YGL090W YOR072WQ08486 104 aa2.02□□□□□ -2.09
LIF1YGL090W YIL086CP40503 102 aa2.01□□□□□ -2.09
LIF1YGL090W MEC1P38111 2368 aa2□□□□□ -2.09
LIF1YGL090W AQY2P0CD90 149 aa2□□□□□ -2.09
LIF1YGL090W BEM2P39960 2167 aaKnown RBP2□□□□□ -2.09
LIF1YGL090W CYR1P08678 2026 aaKnown RBP2□□□□□ -2.09
LIF1YGL090W YLR255CO13574 117 aa1.99□□□□□ -2.09
LIF1YGL090W SHU1P38751 150 aa1.99□□□□□ -2.09
LIF1YGL090W YNL122CP53921 115 aaPredicted RBP1.99□□□□□ -2.09
LIF1YGL090W YKL018C-AQ3E7A7 99 aa1.99□□□□□ -2.09
LIF1YGL090W YNL042W-BQ3E7Z2 85 aa1.99□□□□□ -2.09
LIF1YGL090W YOR032W-AQ8TGS1 66 aa1.99□□□□□ -2.09
LIF1YGL090W YDL022C-AP0C5L6 82 aa1.98□□□□□ -2.09
LIF1YGL090W MVB12P42939 101 aa1.98□□□□□ -2.09
LIF1YGL090W ATP17Q06405 101 aa1.98□□□□□ -2.09
LIF1YGL090W YHR086W-AQ3E746 53 aa1.98□□□□□ -2.09
LIF1YGL090W YDR182W-AQ3E796 67 aa1.98□□□□□ -2.09
LIF1YGL090W YMR122W-AQ3E842 84 aa1.98□□□□□ -2.09
LIF1YGL090W HUB1Q6Q546 73 aa1.98□□□□□ -2.09
LIF1YGL090W Q0032Q9ZZX7 96 aa1.98□□□□□ -2.09
LIF1YGL090W CSF1Q12150 2958 aa1.97□□□□□ -2.09
LIF1YGL090W YBR201C-AQ2V2Q3 67 aa1.97□□□□□ -2.09
LIF1YGL090W YDR246W-AQ3E763 66 aa1.97□□□□□ -2.09
LIF1YGL090W ATP18P81450 59 aa1.96□□□□□ -2.1
LIF1YGL090W LCL1Q02786 101 aa1.96□□□□□ -2.1
LIF1YGL090W YOR034C-AQ3E735 80 aa1.96□□□□□ -2.1
LIF1YGL090W YNL190WP53872 204 aa1.95□□□□□ -2.1
LIF1YGL090W YOL097W-AQ3E7Y9 61 aa1.95□□□□□ -2.1
LIF1YGL090W TRA1P38811 3744 aa1.94□□□□□ -2.1
LIF1YGL090W RPS30AP0CX33 63 aaKnown RBP1.94□□□□□ -2.1
LIF1YGL090W RPS30BP0CX34 63 aaKnown RBP1.94□□□□□ -2.1
LIF1YGL090W YAR064WP39563 99 aa1.94□□□□□ -2.1
LIF1YGL090W SDH6Q3E785 79 aa1.94□□□□□ -2.1
LIF1YGL090W HUG1Q6Q5K6 68 aa1.94□□□□□ -2.1
LIF1YGL090W YBR056W-AI2HB52 66 aa1.93□□□□□ -2.1
LIF1YGL090W COX7P10174 60 aa1.93□□□□□ -2.1
LIF1YGL090W YCR001WP25347 104 aa1.93□□□□□ -2.1
LIF1YGL090W YMR141CP40211 102 aa1.93□□□□□ -2.1
LIF1YGL090W MGR2Q02889 113 aa1.93□□□□□ -2.1
LIF1YGL090W YOL013W-AP0C272 63 aaPredicted RBP1.92□□□□□ -2.1
LIF1YGL090W YHR212W-AP0CX91 67 aa1.92□□□□□ -2.1
LIF1YGL090W YJR128WP47162 119 aa1.91□□□□□ -2.1
LIF1YGL090W SMX2P40204 77 aaKnown RBP1.9□□□□□ -2.11
LIF1YGL090W YIL102CP40488 101 aa1.9□□□□□ -2.11
LIF1YGL090W YLR146W-AQ2V2P1 62 aa1.9□□□□□ -2.11
LIF1YGL090W BRR2P32639 2163 aaKnown RBP1.9□□□□□ -2.11
LIF1YGL090W EDC1P53080 175 aaPredicted RBP1.89□□□□□ -2.11
LIF1YGL090W RPL38P49167 78 aaKnown RBP1.88□□□□□ -2.11
LIF1YGL090W YPR108W-AQ3E7B3 70 aa1.87□□□□□ -2.11
LIF1YGL090W HFA1P32874 2273 aa1.87□□□□□ -2.11
LIF1YGL090W HHY1P39982 102 aa1.86□□□□□ -2.11
LIF1YGL090W YJR107C-AP0CT86 78 aa1.85□□□□□ -2.11
LIF1YGL090W RPL43AP0CX25 92 aaKnown RBP1.85□□□□□ -2.11
LIF1YGL090W RPL43BP0CX26 92 aa1.85□□□□□ -2.11
LIF1YGL090W YOL166W-AQ8TGJ1 51 aa1.85□□□□□ -2.11
LIF1YGL090W YLR157W-DP0CE99 70 aa1.84□□□□□ -2.11
LIF1YGL090W YOR192C-CQ3E736 78 aa1.84□□□□□ -2.11
LIF1YGL090W YIL046W-AQ3E7Z4 54 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms