RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	TOR2	P32600	2474 aa	Known RBP	0.31	□□□□□ -2.36
UBP3	YER151C	RPL28	P02406	149 aa	Known RBP	0.31	□□□□□ -2.36
UBP3	YER151C	YJR107C-A	P0CT86	78 aa		0.31	□□□□□ -2.36
UBP3	YER151C	NSE4	P43124	402 aa		0.31	□□□□□ -2.36
UBP3	YER151C	YNL184C	P53876	108 aa		0.31	□□□□□ -2.36
UBP3	YER151C	YLL006W-A	Q3E814	58 aa		0.31	□□□□□ -2.36
UBP3	YER151C	RPL36B	O14455	100 aa	Known RBP	0.3	□□□□□ -2.36
UBP3	YER151C	YER188C-A	P0C0V2	99 aa		0.3	□□□□□ -2.36
UBP3	YER151C	YHR032W-A	P0C5N6	59 aa		0.3	□□□□□ -2.36
UBP3	YER151C	GSP1	P32835	219 aa	Known RBP	0.3	□□□□□ -2.36
UBP3	YER151C	AIM11	P87275	137 aa		0.3	□□□□□ -2.36
UBP3	YER151C	COF1	Q03048	143 aa	Known RBP	0.3	□□□□□ -2.36
UBP3	YER151C	EMC6	Q12431	108 aa		0.3	□□□□□ -2.36
UBP3	YER151C	DAD4	P69851	72 aa		0.29	□□□□□ -2.36
UBP3	YER151C	YLR296W	Q05898	108 aa		0.29	□□□□□ -2.36
UBP3	YER151C	FCY1	Q12178	158 aa		0.29	□□□□□ -2.36
UBP3	YER151C	YBR209W	P38311	105 aa		0.29	□□□□□ -2.36
UBP3	YER151C	MRX7	P53869	86 aa		0.29	□□□□□ -2.36
UBP3	YER151C	YML079W	Q03629	201 aa		0.29	□□□□□ -2.36
UBP3	YER151C	IRC21	Q04772	201 aa		0.29	□□□□□ -2.36
UBP3	YER151C	SMT3	Q12306	101 aa	Known RBP	0.29	□□□□□ -2.36
UBP3	YER151C	FMP16	Q12497	93 aa		0.29	□□□□□ -2.36
UBP3	YER151C	YDR182W-A	Q3E796	67 aa		0.29	□□□□□ -2.36
UBP3	YER151C	YLR099W-A	Q3E798	87 aa		0.29	□□□□□ -2.36
UBP3	YER151C	IRA1	P18963	3092 aa		0.29	□□□□□ -2.36
UBP3	YER151C	SRP14	P38985	146 aa		0.29	□□□□□ -2.36
UBP3	YER151C	YMR316C-A	I2HB70	103 aa		0.28	□□□□□ -2.36
UBP3	YER151C	RPL36A	P05745	100 aa	Predicted RBP	0.28	□□□□□ -2.36
UBP3	YER151C	MRPL44	P19956	98 aa		0.28	□□□□□ -2.37
UBP3	YER151C	GCV3	P39726	170 aa	Predicted RBP	0.28	□□□□□ -2.37
UBP3	YER151C	SKI6	P46948	246 aa	Predicted RBP	0.28	□□□□□ -2.37
UBP3	YER151C	MRPL11	P36521	249 aa	Predicted RBP	0.27	□□□□□ -2.37
UBP3	YER151C	YBR219C	P38317	127 aa		0.27	□□□□□ -2.37
UBP3	YER151C	GVP36	P40531	326 aa	Known RBP	0.27	□□□□□ -2.37
UBP3	YER151C	YCR085W	P25650	117 aa		0.27	□□□□□ -2.37
UBP3	YER151C	MSL1	P40567	111 aa	Predicted RBP	0.27	□□□□□ -2.37
UBP3	YER151C	YOR072W-B	Q3E832	53 aa		0.27	□□□□□ -2.37
UBP3	YER151C	YGR146C-A	Q8TGT9	53 aa		0.27	□□□□□ -2.37
UBP3	YER151C	MIC10	Q96VH5	97 aa		0.27	□□□□□ -2.37
UBP3	YER151C	CYT2	Q00873	224 aa		0.26	□□□□□ -2.37
UBP3	YER151C	YOL118C	Q08259	102 aa		0.26	□□□□□ -2.37
UBP3	YER151C	SME1	Q12330	94 aa	Predicted RBP	0.26	□□□□□ -2.37
UBP3	YER151C	YHR125W	P38831	101 aa		0.26	□□□□□ -2.37
UBP3	YER151C	RSM18	P40033	138 aa		0.26	□□□□□ -2.37
UBP3	YER151C	ATP18	P81450	59 aa		0.26	□□□□□ -2.37
UBP3	YER151C	YPL225W	Q08971	146 aa	Known RBP	0.26	□□□□□ -2.37
UBP3	YER151C	FMP49	A0A023PZB3	126 aa		0.25	□□□□□ -2.37
UBP3	YER151C	CSM4	Q08955	156 aa		0.25	□□□□□ -2.37
UBP3	YER151C	BET1	P22804	142 aa		0.25	□□□□□ -2.37
UBP3	YER151C	YBR027C	P38220	110 aa		0.25	□□□□□ -2.37
UBP3	YER151C	JAC1	P53193	184 aa		0.25	□□□□□ -2.37
UBP3	YER151C	ZEO1	Q08245	113 aa		0.25	□□□□□ -2.37
UBP3	YER151C	YBR072C-A	Q3E794	53 aa		0.25	□□□□□ -2.37
UBP3	YER151C	CKS1	P20486	150 aa	Known RBP	0.24	□□□□□ -2.37
UBP3	YER151C	YKL183C-A	Q3E765	70 aa		0.24	□□□□□ -2.37
UBP3	YER151C	LSM8	P47093	109 aa	Known RBP	0.23	□□□□□ -2.37
UBP3	YER151C	YLR146W-A	Q2V2P1	62 aa		0.23	□□□□□ -2.37
UBP3	YER151C	GTT1	P40582	234 aa		0.23	□□□□□ -2.37
UBP3	YER151C	YMR007W	Q03675	126 aa		0.23	□□□□□ -2.37
UBP3	YER151C	DAD3	P69850	94 aa		0.22	□□□□□ -2.37
UBP3	YER151C	MEC1	P38111	2368 aa		0.22	□□□□□ -2.37
UBP3	YER151C	COX8	P04039	78 aa		0.22	□□□□□ -2.37
UBP3	YER151C	YMR122C	Q03879	124 aa		0.22	□□□□□ -2.37
UBP3	YER151C	HPA2	Q06592	156 aa		0.22	□□□□□ -2.37
UBP3	YER151C	YFL041W-A	Q3E817	63 aa		0.22	□□□□□ -2.37
UBP3	YER151C	IRA2	P19158	3079 aa		0.22	□□□□□ -2.37
UBP3	YER151C	RPL24A	P04449	155 aa	Known RBP	0.22	□□□□□ -2.37
UBP3	YER151C	URA5	P13298	226 aa	Known RBP	0.22	□□□□□ -2.37
UBP3	YER151C	SNN1	P48232	102 aa		0.22	□□□□□ -2.37
UBP3	YER151C	OLI1	P61829	76 aa		0.22	□□□□□ -2.37
UBP3	YER151C	ATP17	Q06405	101 aa		0.21	□□□□□ -2.38
UBP3	YER151C	RRT15	Q3E811	62 aa		0.21	□□□□□ -2.38
UBP3	YER151C	YCL001W-B	Q96VH2	84 aa		0.21	□□□□□ -2.38
UBP3	YER151C	YER187W	P40102	141 aa		0.2	□□□□□ -2.38
UBP3	YER151C	SEN15	Q04675	128 aa		0.2	□□□□□ -2.38
UBP3	YER151C	VMA9	Q3E7B6	73 aa		0.2	□□□□□ -2.38
UBP3	YER151C	YSY6	P38374	65 aa		0.19	□□□□□ -2.38
UBP3	YER151C	YFL065C	P43539	102 aa		0.19	□□□□□ -2.38
UBP3	YER151C	YPR203W	Q08994	102 aa		0.19	□□□□□ -2.38
UBP3	YER151C	YIL156W-B	Q2V2P4	73 aa		0.19	□□□□□ -2.38
UBP3	YER151C	HUB1	Q6Q546	73 aa		0.19	□□□□□ -2.38
UBP3	YER151C	YOR394C-A	Q8TGJ0	55 aa		0.19	□□□□□ -2.38
UBP3	YER151C	RPL24B	P24000	155 aa	Known RBP	0.19	□□□□□ -2.38
UBP3	YER151C	YAR064W	P39563	99 aa		0.19	□□□□□ -2.38
UBP3	YER151C	LSM6	Q06406	86 aa	Known RBP	0.19	□□□□□ -2.38
UBP3	YER151C	ATP20	Q12233	115 aa		0.19	□□□□□ -2.38
UBP3	YER151C	YHR213W-B	Q8TGK1	99 aa		0.19	□□□□□ -2.38
UBP3	YER151C	HPA3	P39979	161 aa		0.18	□□□□□ -2.38
UBP3	YER151C	SRB6	P32570	121 aa		0.17	□□□□□ -2.38
UBP3	YER151C	YMR103C	Q04436	120 aa		0.17	□□□□□ -2.38
UBP3	YER151C	BPH1	P25356	2167 aa		0.17	□□□□□ -2.38
UBP3	YER151C	HUR1	P45820	110 aa		0.17	□□□□□ -2.38
UBP3	YER151C	YIL014C-A	Q02598	104 aa		0.17	□□□□□ -2.38
UBP3	YER151C	YHR007C-A	Q07074	71 aa		0.17	□□□□□ -2.38
UBP3	YER151C	YKL065W-A	Q2V2P2	73 aa		0.17	□□□□□ -2.38
UBP3	YER151C	YPR170W-B	P0C5R9	85 aa		0.16	□□□□□ -2.38
UBP3	YER151C	YIL002W-A	Q3E7Z5	69 aa		0.16	□□□□□ -2.38
UBP3	YER151C	YOR314W	Q12506	109 aa		0.16	□□□□□ -2.38
UBP3	YER151C	YFR009W-A	P0C5M9	85 aa		0.15	□□□□□ -2.38
UBP3	YER151C	YBL044W	P38194	122 aa		0.15	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms