RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W VAM10Q08474 114 aa2.36□□□□□ -2.03
SIZ1YDR409W SRL1Q08673 210 aa2.36□□□□□ -2.03
SIZ1YDR409W RRT15Q3E811 62 aa2.36□□□□□ -2.03
SIZ1YDR409W KSH1Q8TGJ3 72 aa2.36□□□□□ -2.03
SIZ1YDR409W AIM4P38305 123 aaPredicted RBP2.36□□□□□ -2.03
SIZ1YDR409W YIR020CP40575 100 aa2.35□□□□□ -2.03
SIZ1YDR409W ICY1Q04329 127 aa2.35□□□□□ -2.03
SIZ1YDR409W YAL065CO13511 128 aa2.35□□□□□ -2.03
SIZ1YDR409W RSM19P53733 91 aaPredicted RBP2.35□□□□□ -2.03
SIZ1YDR409W HOR7Q05827 59 aa2.34□□□□□ -2.03
SIZ1YDR409W TAR1Q8TGM6 124 aa2.34□□□□□ -2.03
SIZ1YDR409W RPL29P05747 59 aaPredicted RBP2.34□□□□□ -2.03
SIZ1YDR409W YFR009W-AP0C5M9 85 aa2.34□□□□□ -2.03
SIZ1YDR409W RPS11AP0CX47 156 aaKnown RBP2.33□□□□□ -2.04
SIZ1YDR409W RPS11BP0CX48 156 aaKnown RBP2.33□□□□□ -2.04
SIZ1YDR409W ERI1P62651 68 aaKnown RBP2.33□□□□□ -2.04
SIZ1YDR409W YDR115WQ04598 105 aa2.33□□□□□ -2.04
SIZ1YDR409W YHR125WP38831 101 aa2.33□□□□□ -2.04
SIZ1YDR409W YDR182W-AQ3E796 67 aa2.33□□□□□ -2.04
SIZ1YDR409W YMR230W-AQ3E7B5 62 aa2.33□□□□□ -2.04
SIZ1YDR409W YGL193CP53097 103 aa2.32□□□□□ -2.04
SIZ1YDR409W YMR122W-AQ3E842 84 aa2.32□□□□□ -2.04
SIZ1YDR409W RSM18P40033 138 aa2.32□□□□□ -2.04
SIZ1YDR409W TMC1Q08422 150 aaPredicted RBP2.32□□□□□ -2.04
SIZ1YDR409W NOP10Q6Q547 58 aaPredicted RBP2.32□□□□□ -2.04
SIZ1YDR409W YPR117WQ06116 2489 aa2.31□□□□□ -2.04
SIZ1YDR409W FMP27Q06179 2628 aa2.31□□□□□ -2.04
SIZ1YDR409W YHR032W-AP0C5N6 59 aa2.31□□□□□ -2.04
SIZ1YDR409W YGL260WP53056 76 aa2.31□□□□□ -2.04
SIZ1YDR409W YOR314WQ12506 109 aa2.31□□□□□ -2.04
SIZ1YDR409W YOL166W-AQ8TGJ1 51 aa2.31□□□□□ -2.04
SIZ1YDR409W RPL36BO14455 100 aaKnown RBP2.31□□□□□ -2.04
SIZ1YDR409W RPL36AP05745 100 aaPredicted RBP2.31□□□□□ -2.04
SIZ1YDR409W YLR162WQ06235 118 aa2.31□□□□□ -2.04
SIZ1YDR409W RPL38P49167 78 aaKnown RBP2.3□□□□□ -2.04
SIZ1YDR409W MIC10Q96VH5 97 aa2.3□□□□□ -2.04
SIZ1YDR409W TDA2P40045 126 aa2.3□□□□□ -2.04
SIZ1YDR409W IGD1P43598 195 aa2.3□□□□□ -2.04
SIZ1YDR409W YNL162W-AQ3E7A8 72 aa2.3□□□□□ -2.04
SIZ1YDR409W YGR121W-AQ3E816 71 aa2.3□□□□□ -2.04
SIZ1YDR409W MVB12P42939 101 aa2.29□□□□□ -2.04
SIZ1YDR409W RDS3Q06835 107 aaPredicted RBP2.29□□□□□ -2.04
SIZ1YDR409W YGR240C-AQ3E786 66 aa2.29□□□□□ -2.04
SIZ1YDR409W COX23P38824 151 aa2.29□□□□□ -2.04
SIZ1YDR409W ICS3P47034 131 aa2.29□□□□□ -2.04
SIZ1YDR409W TRA1P38811 3744 aa2.29□□□□□ -2.04
SIZ1YDR409W RPC10P40422 70 aa2.28□□□□□ -2.04
SIZ1YDR409W CMC4Q3E7A9 73 aa2.28□□□□□ -2.04
SIZ1YDR409W FYV5P25585 152 aa2.27□□□□□ -2.05
SIZ1YDR409W RPL26AP05743 127 aaKnown RBP2.27□□□□□ -2.05
SIZ1YDR409W RPL26BP53221 127 aaKnown RBP2.27□□□□□ -2.05
SIZ1YDR409W YBR230W-AQ3E762 66 aa2.27□□□□□ -2.05
SIZ1YDR409W YGR035W-AQ45U48 73 aa2.27□□□□□ -2.05
SIZ1YDR409W CUP1-1P0CX80 61 aa2.26□□□□□ -2.05
SIZ1YDR409W CUP1-2P0CX81 61 aa2.26□□□□□ -2.05
SIZ1YDR409W YHL005CP38752 130 aa2.26□□□□□ -2.05
SIZ1YDR409W YLR307C-AQ3E825 87 aa2.26□□□□□ -2.05
SIZ1YDR409W YBL039W-BP0C268 59 aa2.26□□□□□ -2.05
SIZ1YDR409W Q0297Q9ZZV8 51 aa2.26□□□□□ -2.05
SIZ1YDR409W YBR056W-AI2HB52 66 aa2.25□□□□□ -2.05
SIZ1YDR409W RTC6O14464 93 aa2.25□□□□□ -2.05
SIZ1YDR409W AQY2P0CD90 149 aa2.25□□□□□ -2.05
SIZ1YDR409W RPS30AP0CX33 63 aaKnown RBP2.25□□□□□ -2.05
SIZ1YDR409W RPS30BP0CX34 63 aaKnown RBP2.25□□□□□ -2.05
SIZ1YDR409W YHR213W-BQ8TGK1 99 aa2.25□□□□□ -2.05
SIZ1YDR409W IRA1P18963 3092 aa2.25□□□□□ -2.05
SIZ1YDR409W YPR010C-AA5Z2X5 72 aa2.25□□□□□ -2.05
SIZ1YDR409W YKL065W-AQ2V2P2 73 aa2.25□□□□□ -2.05
SIZ1YDR409W YJL127C-BQ3E828 52 aa2.25□□□□□ -2.05
SIZ1YDR409W TOR1P35169 2470 aa2.24□□□□□ -2.05
SIZ1YDR409W YHR212W-AP0CX91 67 aa2.24□□□□□ -2.05
SIZ1YDR409W YFL067WP43537 175 aa2.24□□□□□ -2.05
SIZ1YDR409W RPL33AP05744 107 aaKnown RBP2.24□□□□□ -2.05
SIZ1YDR409W RPL33BP41056 107 aaKnown RBP2.24□□□□□ -2.05
SIZ1YDR409W LIP1Q03579 150 aa2.24□□□□□ -2.05
SIZ1YDR409W YCR001WP25347 104 aa2.23□□□□□ -2.05
SIZ1YDR409W YEL045CP32616 141 aa2.23□□□□□ -2.05
SIZ1YDR409W YGL149WP53116 101 aa2.23□□□□□ -2.05
SIZ1YDR409W SOM1Q05676 74 aa2.23□□□□□ -2.05
SIZ1YDR409W YJL133C-AQ3E7A3 74 aa2.23□□□□□ -2.05
SIZ1YDR409W YMR122CQ03879 124 aa2.23□□□□□ -2.05
SIZ1YDR409W YNL042W-BQ3E7Z2 85 aa2.23□□□□□ -2.05
SIZ1YDR409W YER188C-AP0C0V2 99 aa2.22□□□□□ -2.05
SIZ1YDR409W YOL013W-AP0C272 63 aaPredicted RBP2.22□□□□□ -2.05
SIZ1YDR409W QCR10P37299 77 aa2.22□□□□□ -2.05
SIZ1YDR409W URA2P07259 2214 aaKnown RBP2.21□□□□□ -2.06
SIZ1YDR409W YIL102CP40488 101 aa2.2□□□□□ -2.06
SIZ1YDR409W OST5Q92316 86 aa2.2□□□□□ -2.06
SIZ1YDR409W SPC1P46965 94 aa2.19□□□□□ -2.06
SIZ1YDR409W YLL066W-BQ8TGJ7 56 aa2.19□□□□□ -2.06
SIZ1YDR409W YPR153WQ06537 140 aa2.19□□□□□ -2.06
SIZ1YDR409W SGF11Q03067 99 aa2.19□□□□□ -2.06
SIZ1YDR409W GCN1P33892 2672 aaKnown RBP2.18□□□□□ -2.06
SIZ1YDR409W YPR195CQ06594 109 aa2.18□□□□□ -2.06
SIZ1YDR409W YJL197C-AP0C5P0 93 aa2.17□□□□□ -2.06
SIZ1YDR409W DDR2P89113 61 aa2.17□□□□□ -2.06
SIZ1YDR409W RPL43AP0CX25 92 aaKnown RBP2.17□□□□□ -2.06
SIZ1YDR409W RPL43BP0CX26 92 aa2.17□□□□□ -2.06
SIZ1YDR409W GIS2P53849 153 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
SIZ1YDR409W YHR007C-AQ07074 71 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 76.6 ms