RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene CNL1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNL1YDR357C FPR2P32472 135 aa3.08□□□□□ -1.92
CNL1YDR357C AIM4P38305 123 aaPredicted RBP3.08□□□□□ -1.92
CNL1YDR357C YKL023C-AQ2V2P3 75 aa3.08□□□□□ -1.92
CNL1YDR357C YGL041C-BQ3E750 60 aa3.08□□□□□ -1.92
CNL1YDR357C COA3Q3E7B2 85 aa3.07□□□□□ -1.92
CNL1YDR357C CSF1Q12150 2958 aa3.07□□□□□ -1.92
CNL1YDR357C YDR010CQ12426 110 aa3.06□□□□□ -1.92
CNL1YDR357C PAU1P0CE88 120 aa3.05□□□□□ -1.92
CNL1YDR357C PAU14P0CE89 120 aa3.05□□□□□ -1.92
CNL1YDR357C YGR035W-AQ45U48 73 aa3.05□□□□□ -1.92
CNL1YDR357C ERI1P62651 68 aaKnown RBP3.04□□□□□ -1.92
CNL1YDR357C LCL2Q08045 131 aa3.04□□□□□ -1.92
CNL1YDR357C PMD1P32634 1753 aa3.04□□□□□ -1.92
CNL1YDR357C UBR2Q07963 1872 aa3.03□□□□□ -1.92
CNL1YDR357C YDR210WQ03482 75 aa3.03□□□□□ -1.92
CNL1YDR357C CCW12Q12127 133 aa3.03□□□□□ -1.92
CNL1YDR357C NOP10Q6Q547 58 aaPredicted RBP3.03□□□□□ -1.92
CNL1YDR357C RPS11AP0CX47 156 aaKnown RBP3.02□□□□□ -1.93
CNL1YDR357C RPS11BP0CX48 156 aaKnown RBP3.02□□□□□ -1.93
CNL1YDR357C AGA2P32781 87 aa3.02□□□□□ -1.93
CNL1YDR357C YBR219CP38317 127 aa3.02□□□□□ -1.93
CNL1YDR357C YDR246W-AQ3E763 66 aa3.02□□□□□ -1.93
CNL1YDR357C CDC39P25655 2108 aaKnown RBP3.02□□□□□ -1.93
CNL1YDR357C PAU7P39545 55 aa3.01□□□□□ -1.93
CNL1YDR357C YIL156W-BQ2V2P4 73 aa3.01□□□□□ -1.93
CNL1YDR357C YEL008WP40001 126 aa3□□□□□ -1.93
CNL1YDR357C MRPS12P53732 153 aa3□□□□□ -1.93
CNL1YDR357C SMX2P40204 77 aaKnown RBP2.99□□□□□ -1.93
CNL1YDR357C PAU20Q08322 120 aa2.99□□□□□ -1.93
CNL1YDR357C YGR240C-AQ3E786 66 aa2.98□□□□□ -1.93
CNL1YDR357C ACC1Q00955 2233 aaKnown RBP2.98□□□□□ -1.93
CNL1YDR357C YPR096CO13587 100 aa2.97□□□□□ -1.93
CNL1YDR357C YDR182W-AQ3E796 67 aa2.97□□□□□ -1.93
CNL1YDR357C YJL009WP47078 108 aa2.95□□□□□ -1.94
CNL1YDR357C YNL146C-AQ3E7Z1 64 aa2.94□□□□□ -1.94
CNL1YDR357C MOT1P32333 1867 aa2.94□□□□□ -1.94
CNL1YDR357C MEC1P38111 2368 aa2.93□□□□□ -1.94
CNL1YDR357C YCL042WP25572 119 aa2.93□□□□□ -1.94
CNL1YDR357C YDL022C-AP0C5L6 82 aa2.92□□□□□ -1.94
CNL1YDR357C FLO1P32768 1537 aa2.92□□□□□ -1.94
CNL1YDR357C CYR1P08678 2026 aaKnown RBP2.92□□□□□ -1.94
CNL1YDR357C STT4P37297 1900 aa2.91□□□□□ -1.94
CNL1YDR357C YNL042W-BQ3E7Z2 85 aa2.91□□□□□ -1.94
CNL1YDR357C YLR255CO13574 117 aa2.9□□□□□ -1.95
CNL1YDR357C HKR1P41809 1802 aa2.9□□□□□ -1.95
CNL1YDR357C YCR001WP25347 104 aa2.89□□□□□ -1.95
CNL1YDR357C ATP17Q06405 101 aa2.89□□□□□ -1.95
CNL1YDR357C YKL018C-AQ3E7A7 99 aa2.89□□□□□ -1.95
CNL1YDR357C TRA1P38811 3744 aa2.89□□□□□ -1.95
CNL1YDR357C AQY2P0CD90 149 aa2.88□□□□□ -1.95
CNL1YDR357C YMR007WQ03675 126 aa2.88□□□□□ -1.95
CNL1YDR357C HUB1Q6Q546 73 aa2.88□□□□□ -1.95
CNL1YDR357C YOR032W-AQ8TGS1 66 aa2.88□□□□□ -1.95
CNL1YDR357C YIL086CP40503 102 aa2.87□□□□□ -1.95
CNL1YDR357C YNL122CP53921 115 aaPredicted RBP2.87□□□□□ -1.95
CNL1YDR357C YMR122W-AQ3E842 84 aa2.87□□□□□ -1.95
CNL1YDR357C RPS30AP0CX33 63 aaKnown RBP2.86□□□□□ -1.95
CNL1YDR357C RPS30BP0CX34 63 aaKnown RBP2.86□□□□□ -1.95
CNL1YDR357C SGF11Q03067 99 aa2.85□□□□□ -1.95
CNL1YDR357C YOL097W-AQ3E7Y9 61 aa2.85□□□□□ -1.95
CNL1YDR357C BRR2P32639 2163 aaKnown RBP2.84□□□□□ -1.95
CNL1YDR357C YBR201C-AQ2V2Q3 67 aa2.84□□□□□ -1.95
CNL1YDR357C SLH1P53327 1967 aaKnown RBP2.83□□□□□ -1.96
CNL1YDR357C SHU1P38751 150 aa2.83□□□□□ -1.96
CNL1YDR357C MGR2Q02889 113 aa2.83□□□□□ -1.96
CNL1YDR357C YNL190WP53872 204 aa2.82□□□□□ -1.96
CNL1YDR357C YOR072WQ08486 104 aa2.82□□□□□ -1.96
CNL1YDR357C YOR034C-AQ3E735 80 aa2.82□□□□□ -1.96
CNL1YDR357C YOL166W-AQ8TGJ1 51 aa2.82□□□□□ -1.96
CNL1YDR357C BPH1P25356 2167 aa2.81□□□□□ -1.96
CNL1YDR357C EDC1P53080 175 aaPredicted RBP2.81□□□□□ -1.96
CNL1YDR357C ATP18P81450 59 aa2.81□□□□□ -1.96
CNL1YDR357C LCL1Q02786 101 aa2.81□□□□□ -1.96
CNL1YDR357C YHR086W-AQ3E746 53 aa2.81□□□□□ -1.96
CNL1YDR357C Q0032Q9ZZX7 96 aa2.8□□□□□ -1.96
CNL1YDR357C SDH6Q3E785 79 aa2.79□□□□□ -1.96
CNL1YDR357C SEC16P48415 2195 aaKnown RBP2.78□□□□□ -1.96
CNL1YDR357C YMR141CP40211 102 aa2.77□□□□□ -1.97
CNL1YDR357C GIS2P53849 153 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
CNL1YDR357C YOR192C-CQ3E736 78 aa2.77□□□□□ -1.97
CNL1YDR357C BEM2P39960 2167 aaKnown RBP2.77□□□□□ -1.97
CNL1YDR357C MVB12P42939 101 aa2.76□□□□□ -1.97
CNL1YDR357C COX7P10174 60 aa2.74□□□□□ -1.97
CNL1YDR357C HUG1Q6Q5K6 68 aa2.74□□□□□ -1.97
CNL1YDR357C YAR064WP39563 99 aa2.73□□□□□ -1.97
CNL1YDR357C YJR107C-AP0CT86 78 aa2.72□□□□□ -1.97
CNL1YDR357C YHR212W-AP0CX91 67 aa2.72□□□□□ -1.97
CNL1YDR357C YBR032WP38223 100 aa2.71□□□□□ -1.98
CNL1YDR357C YJR128WP47162 119 aa2.71□□□□□ -1.98
CNL1YDR357C YDL012CQ12489 107 aa2.7□□□□□ -1.98
CNL1YDR357C YLR146W-AQ2V2P1 62 aa2.69□□□□□ -1.98
CNL1YDR357C YMR001C-AQ8TGS9 76 aa2.69□□□□□ -1.98
CNL1YDR357C DYN1P36022 4092 aa2.69□□□□□ -1.98
CNL1YDR357C YOL013W-AP0C272 63 aaPredicted RBP2.68□□□□□ -1.98
CNL1YDR357C YPR108W-AQ3E7B3 70 aa2.68□□□□□ -1.98
CNL1YDR357C YDR524C-BQ3E6R4 66 aa2.67□□□□□ -1.98
CNL1YDR357C HFA1P32874 2273 aa2.66□□□□□ -1.98
CNL1YDR357C YBL039W-BP0C268 59 aa2.66□□□□□ -1.98
CNL1YDR357C YLR157W-DP0CE99 70 aa2.65□□□□□ -1.99
CNL1YDR357C RPL38P49167 78 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms