RNA–Protein interactions for RNA: YDR340W

YDR340W, Transcript of Putative protein of unknown function, yeastyeast

Gene YDR340W, Length 303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR340WYDR340W YPR108W-AQ3E7B3 70 aa1.01□□□□□ -2.25
YDR340WYDR340W TIM12P32830 109 aa1□□□□□ -2.25
YDR340WYDR340W PMD1P32634 1753 aa1□□□□□ -2.25
YDR340WYDR340W APC1P53886 1748 aa1□□□□□ -2.25
YDR340WYDR340W TY2B-LR1P0C2J3 1770 aa0.99□□□□□ -2.25
YDR340WYDR340W TY2B-FP0CX63 1770 aa0.99□□□□□ -2.25
YDR340WYDR340W TY2B-GR2P0CX64 1770 aa0.99□□□□□ -2.25
YDR340WYDR340W TY2B-DR2Q03494 1770 aa0.99□□□□□ -2.25
YDR340WYDR340W TY2B-OR1Q12113 1770 aa0.99□□□□□ -2.25
YDR340WYDR340W TY2B-BQ12491 1770 aa0.99□□□□□ -2.25
YDR340WYDR340W TY2B-OR2Q12501 1770 aa0.99□□□□□ -2.25
YDR340WYDR340W YBR032WP38223 100 aa0.99□□□□□ -2.25
YDR340WYDR340W PAI3P01094 68 aa0.98□□□□□ -2.25
YDR340WYDR340W YFR009W-AP0C5M9 85 aa0.98□□□□□ -2.25
YDR340WYDR340W UFD4P33202 1483 aa0.98□□□□□ -2.25
YDR340WYDR340W EDC1P53080 175 aaPredicted RBP0.97□□□□□ -2.25
YDR340WYDR340W TY2B-DR3Q07791 1770 aaKnown RBP0.97□□□□□ -2.25
YDR340WYDR340W ATP17Q06405 101 aa0.95□□□□□ -2.26
YDR340WYDR340W YFL041W-AQ3E817 63 aa0.93□□□□□ -2.26
YDR340WYDR340W YIL134C-AQ45U18 67 aa0.93□□□□□ -2.26
YDR340WYDR340W ATX1P38636 73 aa0.92□□□□□ -2.26
YDR340WYDR340W YOR032W-AQ8TGS1 66 aa0.92□□□□□ -2.26
YDR340WYDR340W TCB3Q03640 1545 aaKnown RBP0.91□□□□□ -2.26
YDR340WYDR340W PAU7P39545 55 aa0.91□□□□□ -2.26
YDR340WYDR340W SPI1P40092 148 aa0.91□□□□□ -2.26
YDR340WYDR340W YKL018C-AQ3E7A7 99 aa0.91□□□□□ -2.26
YDR340WYDR340W SSS1P35179 80 aa0.9□□□□□ -2.27
YDR340WYDR340W SCC2Q04002 1493 aa0.9□□□□□ -2.27
YDR340WYDR340W ARO1P08566 1588 aaKnown RBP0.88□□□□□ -2.27
YDR340WYDR340W ERI1P62651 68 aaKnown RBP0.88□□□□□ -2.27
YDR340WYDR340W IML1P47170 1584 aa0.87□□□□□ -2.27
YDR340WYDR340W DNF1P32660 1571 aa0.87□□□□□ -2.27
YDR340WYDR340W TAO3P40468 2376 aa0.85□□□□□ -2.27
YDR340WYDR340W YGR025WP53216 100 aa0.85□□□□□ -2.27
YDR340WYDR340W FKS3Q04952 1785 aa0.84□□□□□ -2.27
YDR340WYDR340W RRP5Q05022 1729 aaKnown RBP0.84□□□□□ -2.28
YDR340WYDR340W DNF2Q12675 1612 aa0.83□□□□□ -2.28
YDR340WYDR340W SEN1Q00416 2231 aaKnown RBP0.83□□□□□ -2.28
YDR340WYDR340W YLR146W-AQ2V2P1 62 aa0.83□□□□□ -2.28
YDR340WYDR340W YDR246W-AQ3E763 66 aa0.83□□□□□ -2.28
YDR340WYDR340W SMC4Q12267 1418 aa0.82□□□□□ -2.28
YDR340WYDR340W VPS15P22219 1454 aa0.82□□□□□ -2.28
YDR340WYDR340W RPO31P04051 1460 aa0.81□□□□□ -2.28
YDR340WYDR340W YBL044WP38194 122 aa0.81□□□□□ -2.28
YDR340WYDR340W YBR200W-AQ3E755 54 aa0.81□□□□□ -2.28
YDR340WYDR340W IQG1Q12280 1495 aa0.8□□□□□ -2.28
YDR340WYDR340W HUB1Q6Q546 73 aa0.79□□□□□ -2.28
YDR340WYDR340W RPS27AP35997 82 aaKnown RBP0.78□□□□□ -2.28
YDR340WYDR340W YSY6P38374 65 aa0.78□□□□□ -2.28
YDR340WYDR340W YOR011W-AQ3E807 68 aa0.78□□□□□ -2.28
YDR340WYDR340W MYO4P32492 1471 aa0.78□□□□□ -2.28
YDR340WYDR340W KOG1P38873 1557 aa0.78□□□□□ -2.29
YDR340WYDR340W IRC20Q06554 1556 aa0.78□□□□□ -2.29
YDR340WYDR340W YBL039W-BP0C268 59 aa0.77□□□□□ -2.29
YDR340WYDR340W MMS1Q06211 1407 aa0.77□□□□□ -2.29
YDR340WYDR340W YDR182W-AQ3E796 67 aa0.76□□□□□ -2.29
YDR340WYDR340W YIL102C-AQ2V2P5 75 aa0.75□□□□□ -2.29
YDR340WYDR340W YOR394C-AQ8TGJ0 55 aa0.75□□□□□ -2.29
YDR340WYDR340W OLI1P61829 76 aa0.74□□□□□ -2.29
YDR340WYDR340W YOL131WQ08270 108 aa0.74□□□□□ -2.29
YDR340WYDR340W TY3B-GQ99315 1547 aa0.73□□□□□ -2.29
YDR340WYDR340W RPO21P04050 1733 aaKnown RBP0.72□□□□□ -2.29
YDR340WYDR340W RPS30AP0CX33 63 aaKnown RBP0.72□□□□□ -2.29
YDR340WYDR340W RPS30BP0CX34 63 aaKnown RBP0.72□□□□□ -2.29
YDR340WYDR340W YCR108CQ3E819 63 aa0.71□□□□□ -2.3
YDR340WYDR340W BCK1Q01389 1478 aa0.71□□□□□ -2.3
YDR340WYDR340W YFR010W-AP0C5N0 62 aa0.69□□□□□ -2.3
YDR340WYDR340W HAP1P0CE41 1502 aa0.67□□□□□ -2.3
YDR340WYDR340W VMR1P38735 1592 aa0.66□□□□□ -2.3
YDR340WYDR340W PDR12Q02785 1511 aa0.66□□□□□ -2.3
YDR340WYDR340W VMA9Q3E7B6 73 aa0.66□□□□□ -2.3
YDR340WYDR340W YOL166W-AQ8TGJ1 51 aa0.65□□□□□ -2.31
YDR340WYDR340W SIP18P50263 79 aa0.61□□□□□ -2.31
YDR340WYDR340W YMR001C-AQ8TGS9 76 aa0.61□□□□□ -2.31
YDR340WYDR340W VTH1P40438 1549 aa0.59□□□□□ -2.31
YDR340WYDR340W VTH2P40890 1549 aa0.59□□□□□ -2.31
YDR340WYDR340W SPO14P36126 1683 aa0.59□□□□□ -2.32
YDR340WYDR340W YOR008C-AQ3E7B9 74 aa0.58□□□□□ -2.32
YDR340WYDR340W PDR15Q04182 1529 aaKnown RBP0.58□□□□□ -2.32
YDR340WYDR340W YLR157W-DP0CE99 70 aa0.56□□□□□ -2.32
YDR340WYDR340W RPS27BP38711 82 aa0.55□□□□□ -2.32
YDR340WYDR340W TOS6P48560 102 aa0.54□□□□□ -2.32
YDR340WYDR340W YBR230W-AQ3E762 66 aa0.54□□□□□ -2.32
YDR340WYDR340W YBT1P32386 1661 aa0.49□□□□□ -2.33
YDR340WYDR340W PDR5P33302 1511 aaKnown RBP0.49□□□□□ -2.33
YDR340WYDR340W YKL023C-AQ2V2P3 75 aa0.49□□□□□ -2.33
YDR340WYDR340W RPS29AP41057 56 aaKnown RBP0.47□□□□□ -2.33
YDR340WYDR340W TY1B-DR4Q07793 1604 aa0.46□□□□□ -2.34
YDR340WYDR340W YCF1P39109 1515 aaKnown RBP0.45□□□□□ -2.34
YDR340WYDR340W UTP20P35194 2493 aaKnown RBP0.45□□□□□ -2.34
YDR340WYDR340W YOR192C-CQ3E736 78 aa0.44□□□□□ -2.34
YDR340WYDR340W YGR146C-AQ8TGT9 53 aa0.44□□□□□ -2.34
YDR340WYDR340W CDC25P04821 1589 aa0.44□□□□□ -2.34
YDR340WYDR340W SPT6P23615 1451 aaKnown RBP0.39□□□□□ -2.35
YDR340WYDR340W NUP188P52593 1655 aaKnown RBP0.38□□□□□ -2.35
YDR340WYDR340W MON2P48563 1636 aaPredicted RBP0.38□□□□□ -2.35
YDR340WYDR340W YOR093CQ12275 1648 aa0.38□□□□□ -2.35
YDR340WYDR340W SNQ2P32568 1501 aaKnown RBP0.35□□□□□ -2.35
YDR340WYDR340W SSK2P53599 1579 aa0.33□□□□□ -2.36
YDR340WYDR340W TOR1P35169 2470 aa0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms