RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C PDR10P51533 1564 aa-0.9□□□□□ -2.55
RUB1YDR139C SIP18P50263 79 aa-0.9□□□□□ -2.55
RUB1YDR139C OLI1P61829 76 aa-0.9□□□□□ -2.55
RUB1YDR139C LSM2P38203 95 aaKnown RBP-0.91□□□□□ -2.56
RUB1YDR139C YOR105WQ08504 108 aa-0.91□□□□□ -2.56
RUB1YDR139C YCL001W-BQ96VH2 84 aa-0.91□□□□□ -2.56
RUB1YDR139C SMC4Q12267 1418 aa-0.91□□□□□ -2.56
RUB1YDR139C TY1B-NL2Q99337 1749 aaKnown RBP-0.92□□□□□ -2.56
RUB1YDR139C ZEO1Q08245 113 aa-0.92□□□□□ -2.56
RUB1YDR139C POC4Q12245 148 aaPredicted RBP-0.92□□□□□ -2.56
RUB1YDR139C TOS6P48560 102 aa-0.93□□□□□ -2.56
RUB1YDR139C APC1P53886 1748 aa-0.94□□□□□ -2.56
RUB1YDR139C RPS27AP35997 82 aaKnown RBP-0.94□□□□□ -2.56
RUB1YDR139C YKL065W-AQ2V2P2 73 aa-0.94□□□□□ -2.56
RUB1YDR139C IRC20Q06554 1556 aa-0.96□□□□□ -2.56
RUB1YDR139C YDL022C-AP0C5L6 82 aa-0.96□□□□□ -2.56
RUB1YDR139C YMR175W-AQ3E766 64 aa-0.96□□□□□ -2.56
RUB1YDR139C YMR082CQ04276 118 aa-0.97□□□□□ -2.56
RUB1YDR139C YPL225WQ08971 146 aaKnown RBP-0.98□□□□□ -2.57
RUB1YDR139C YLR146W-AQ2V2P1 62 aa-0.98□□□□□ -2.57
RUB1YDR139C FMP27Q06179 2628 aa-0.99□□□□□ -2.57
RUB1YDR139C SIN3P22579 1536 aa-0.99□□□□□ -2.57
RUB1YDR139C KOG1P38873 1557 aa-1□□□□□ -2.57
RUB1YDR139C YHR050W-AQ05451 56 aa-1□□□□□ -2.57
RUB1YDR139C YOR394C-AQ8TGJ0 55 aa-1□□□□□ -2.57
RUB1YDR139C ATP17Q06405 101 aa-1.01□□□□□ -2.57
RUB1YDR139C YOR314WQ12506 109 aa-1.01□□□□□ -2.57
RUB1YDR139C YCR075W-AQ3E830 75 aa-1.02□□□□□ -2.57
RUB1YDR139C YBR200W-AQ3E755 54 aa-1.03□□□□□ -2.57
RUB1YDR139C YOR011W-AQ3E807 68 aa-1.03□□□□□ -2.57
RUB1YDR139C TOR2P32600 2474 aaKnown RBP-1.03□□□□□ -2.57
RUB1YDR139C YPR145C-AQ2V2P0 78 aa-1.04□□□□□ -2.58
RUB1YDR139C YPR117WQ06116 2489 aa-1.05□□□□□ -2.58
RUB1YDR139C MDN1Q12019 4910 aaKnown RBP-1.05□□□□□ -2.58
RUB1YDR139C TY3B-GQ99315 1547 aa-1.05□□□□□ -2.58
RUB1YDR139C MLP1Q02455 1875 aaKnown RBP-1.05□□□□□ -2.58
RUB1YDR139C RPO21P04050 1733 aaKnown RBP-1.06□□□□□ -2.58
RUB1YDR139C COA2Q3E823 68 aa-1.06□□□□□ -2.58
RUB1YDR139C MMS22Q06164 1454 aa-1.06□□□□□ -2.58
RUB1YDR139C ESC1Q03661 1658 aaKnown RBP-1.08□□□□□ -2.58
RUB1YDR139C YSP2Q06681 1438 aa-1.08□□□□□ -2.58
RUB1YDR139C YBL039W-BP0C268 59 aa-1.09□□□□□ -2.58
RUB1YDR139C QCR9P22289 66 aa-1.09□□□□□ -2.58
RUB1YDR139C YDR524C-BQ3E6R4 66 aa-1.09□□□□□ -2.58
RUB1YDR139C YOR032W-AQ8TGS1 66 aa-1.1□□□□□ -2.59
RUB1YDR139C MEC1P38111 2368 aa-1.11□□□□□ -2.59
RUB1YDR139C FKS3Q04952 1785 aa-1.11□□□□□ -2.59
RUB1YDR139C LTE1P07866 1435 aa-1.11□□□□□ -2.59
RUB1YDR139C SWM2P40342 146 aa-1.11□□□□□ -2.59
RUB1YDR139C YGL194C-AQ2V2P6 80 aa-1.11□□□□□ -2.59
RUB1YDR139C YGR121W-AQ3E816 71 aa-1.11□□□□□ -2.59
RUB1YDR139C CWP2P43497 92 aa-1.12□□□□□ -2.59
RUB1YDR139C HAP1P0CE41 1502 aa-1.14□□□□□ -2.59
RUB1YDR139C YGR035W-AQ45U48 73 aa-1.14□□□□□ -2.59
RUB1YDR139C PAU7P39545 55 aa-1.15□□□□□ -2.59
RUB1YDR139C TEL1P38110 2787 aa-1.16□□□□□ -2.6
RUB1YDR139C YDR119W-AQ2V2P9 66 aa-1.17□□□□□ -2.6
RUB1YDR139C YLL006W-AQ3E814 58 aa-1.17□□□□□ -2.6
RUB1YDR139C RPS27BP38711 82 aa-1.18□□□□□ -2.6
RUB1YDR139C YGL258W-AQ3E740 77 aa-1.18□□□□□ -2.6
RUB1YDR139C HUB1Q6Q546 73 aa-1.18□□□□□ -2.6
RUB1YDR139C ESP1Q03018 1630 aa-1.18□□□□□ -2.6
RUB1YDR139C SSS1P35179 80 aa-1.19□□□□□ -2.6
RUB1YDR139C TIM12P32830 109 aa-1.21□□□□□ -2.6
RUB1YDR139C YBR230W-AQ3E762 66 aa-1.21□□□□□ -2.6
RUB1YDR139C YGR146C-AQ8TGT9 53 aa-1.21□□□□□ -2.6
RUB1YDR139C ARO1P08566 1588 aaKnown RBP-1.22□□□□□ -2.61
RUB1YDR139C VPS15P22219 1454 aa-1.24□□□□□ -2.61
RUB1YDR139C YOR072W-BQ3E832 53 aa-1.26□□□□□ -2.61
RUB1YDR139C SPI1P40092 148 aa-1.29□□□□□ -2.62
RUB1YDR139C RRP5Q05022 1729 aaKnown RBP-1.3□□□□□ -2.62
RUB1YDR139C DNF2Q12675 1612 aa-1.3□□□□□ -2.62
RUB1YDR139C ERI1P62651 68 aaKnown RBP-1.31□□□□□ -2.62
RUB1YDR139C GCN1P33892 2672 aaKnown RBP-1.34□□□□□ -2.62
RUB1YDR139C IML1P47170 1584 aa-1.36□□□□□ -2.63
RUB1YDR139C DYN1P36022 4092 aa-1.37□□□□□ -2.63
RUB1YDR139C DOP1Q03921 1698 aa-1.37□□□□□ -2.63
RUB1YDR139C PDR12Q02785 1511 aa-1.37□□□□□ -2.63
RUB1YDR139C UFD4P33202 1483 aa-1.37□□□□□ -2.63
RUB1YDR139C RPS30AP0CX33 63 aaKnown RBP-1.38□□□□□ -2.63
RUB1YDR139C RPS30BP0CX34 63 aaKnown RBP-1.38□□□□□ -2.63
RUB1YDR139C BCK1Q01389 1478 aa-1.38□□□□□ -2.63
RUB1YDR139C IQG1Q12280 1495 aa-1.38□□□□□ -2.63
RUB1YDR139C DNF1P32660 1571 aa-1.39□□□□□ -2.63
RUB1YDR139C YLR157W-DP0CE99 70 aa-1.4□□□□□ -2.63
RUB1YDR139C FIG2P25653 1609 aa-1.43□□□□□ -2.64
RUB1YDR139C YOL131WQ08270 108 aa-1.44□□□□□ -2.64
RUB1YDR139C YFL041W-AQ3E817 63 aa-1.44□□□□□ -2.64
RUB1YDR139C YHR213W-AQ8TGT4 77 aa-1.45□□□□□ -2.64
RUB1YDR139C RPO31P04051 1460 aa-1.45□□□□□ -2.64
RUB1YDR139C PDR15Q04182 1529 aaKnown RBP-1.45□□□□□ -2.64
RUB1YDR139C YSY6P38374 65 aa-1.46□□□□□ -2.64
RUB1YDR139C NUM1Q00402 2748 aa-1.48□□□□□ -2.65
RUB1YDR139C SNQ2P32568 1501 aaKnown RBP-1.49□□□□□ -2.65
RUB1YDR139C VMR1P38735 1592 aa-1.49□□□□□ -2.65
RUB1YDR139C YOL166W-AQ8TGJ1 51 aa-1.49□□□□□ -2.65
RUB1YDR139C YOR192C-CQ3E736 78 aa-1.5□□□□□ -2.65
RUB1YDR139C Q0017Q9ZZX8 53 aa-1.5□□□□□ -2.65
RUB1YDR139C NUP159P40477 1460 aa-1.51□□□□□ -2.65
RUB1YDR139C TY1B-DR4Q07793 1604 aa-1.51□□□□□ -2.65
Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms