RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C APC1P53886 1748 aa0.72□□□□□ -2.29
SHE3YBR130C PMD1P32634 1753 aa0.71□□□□□ -2.3
SHE3YBR130C ATP17Q06405 101 aa0.71□□□□□ -2.3
SHE3YBR130C TY2B-CP25384 1770 aa0.7□□□□□ -2.3
SHE3YBR130C TY2B-DR1Q12472 1770 aa0.7□□□□□ -2.3
SHE3YBR130C YDR119W-AQ2V2P9 66 aa0.69□□□□□ -2.3
SHE3YBR130C YHR213W-AQ8TGT4 77 aa0.67□□□□□ -2.3
SHE3YBR130C MMS1Q06211 1407 aa0.66□□□□□ -2.3
SHE3YBR130C YBL044WP38194 122 aa0.66□□□□□ -2.3
SHE3YBR130C YGR035W-AQ45U48 73 aa0.66□□□□□ -2.3
SHE3YBR130C LSM2P38203 95 aaKnown RBP0.64□□□□□ -2.31
SHE3YBR130C PAU7P39545 55 aa0.63□□□□□ -2.31
SHE3YBR130C YLR146W-AQ2V2P1 62 aa0.62□□□□□ -2.31
SHE3YBR130C YCR108CQ3E819 63 aa0.62□□□□□ -2.31
SHE3YBR130C SMC4Q12267 1418 aa0.61□□□□□ -2.31
SHE3YBR130C TIM12P32830 109 aa0.59□□□□□ -2.31
SHE3YBR130C OLI1P61829 76 aa0.59□□□□□ -2.31
SHE3YBR130C YDR246W-AQ3E763 66 aa0.59□□□□□ -2.31
SHE3YBR130C TY2B-LR1P0C2J3 1770 aa0.57□□□□□ -2.32
SHE3YBR130C TY2B-FP0CX63 1770 aa0.57□□□□□ -2.32
SHE3YBR130C TY2B-GR2P0CX64 1770 aa0.57□□□□□ -2.32
SHE3YBR130C TY2B-DR2Q03494 1770 aa0.57□□□□□ -2.32
SHE3YBR130C TY2B-OR1Q12113 1770 aa0.57□□□□□ -2.32
SHE3YBR130C TY2B-BQ12491 1770 aa0.57□□□□□ -2.32
SHE3YBR130C TY2B-OR2Q12501 1770 aa0.57□□□□□ -2.32
SHE3YBR130C NUP159P40477 1460 aa0.55□□□□□ -2.32
SHE3YBR130C YOR032W-AQ8TGS1 66 aa0.55□□□□□ -2.32
SHE3YBR130C SPI1P40092 148 aa0.54□□□□□ -2.32
SHE3YBR130C YKL018C-AQ3E7A7 99 aa0.54□□□□□ -2.32
SHE3YBR130C YOR011W-AQ3E807 68 aa0.54□□□□□ -2.32
SHE3YBR130C TY1B-NL2Q99337 1749 aaKnown RBP0.54□□□□□ -2.32
SHE3YBR130C TY2B-DR3Q07791 1770 aaKnown RBP0.54□□□□□ -2.32
SHE3YBR130C UFD4P33202 1483 aa0.54□□□□□ -2.32
SHE3YBR130C KOG1P38873 1557 aa0.53□□□□□ -2.33
SHE3YBR130C YBR200W-AQ3E755 54 aa0.52□□□□□ -2.33
SHE3YBR130C HUB1Q6Q546 73 aa0.52□□□□□ -2.33
SHE3YBR130C DOP1Q03921 1698 aa0.52□□□□□ -2.33
SHE3YBR130C PAI3P01094 68 aa0.51□□□□□ -2.33
SHE3YBR130C SSS1P35179 80 aa0.51□□□□□ -2.33
SHE3YBR130C YFL041W-AQ3E817 63 aa0.51□□□□□ -2.33
SHE3YBR130C IRC20Q06554 1556 aa0.5□□□□□ -2.33
SHE3YBR130C RPS27AP35997 82 aaKnown RBP0.5□□□□□ -2.33
SHE3YBR130C YOR394C-AQ8TGJ0 55 aa0.5□□□□□ -2.33
SHE3YBR130C YBL039W-BP0C268 59 aa0.48□□□□□ -2.33
SHE3YBR130C ERI1P62651 68 aaKnown RBP0.46□□□□□ -2.34
SHE3YBR130C IML1P47170 1584 aa0.45□□□□□ -2.34
SHE3YBR130C YOR008C-AQ3E7B9 74 aa0.45□□□□□ -2.34
SHE3YBR130C UTP20P35194 2493 aaKnown RBP0.45□□□□□ -2.34
SHE3YBR130C SIP18P50263 79 aa0.43□□□□□ -2.34
SHE3YBR130C YDR182W-AQ3E796 67 aa0.43□□□□□ -2.34
SHE3YBR130C YMR001C-AQ8TGS9 76 aa0.41□□□□□ -2.34
SHE3YBR130C RPS29AP41057 56 aaKnown RBP0.4□□□□□ -2.35
SHE3YBR130C ARO1P08566 1588 aaKnown RBP0.4□□□□□ -2.35
SHE3YBR130C SCC2Q04002 1493 aa0.38□□□□□ -2.35
SHE3YBR130C YSY6P38374 65 aa0.36□□□□□ -2.35
SHE3YBR130C RPO31P04051 1460 aa0.35□□□□□ -2.35
SHE3YBR130C RPO21P04050 1733 aaKnown RBP0.35□□□□□ -2.35
SHE3YBR130C VTH1P40438 1549 aa0.34□□□□□ -2.35
SHE3YBR130C VTH2P40890 1549 aa0.34□□□□□ -2.35
SHE3YBR130C TY3B-GQ99315 1547 aa0.33□□□□□ -2.36
SHE3YBR130C DNF2Q12675 1612 aa0.33□□□□□ -2.36
SHE3YBR130C IQG1Q12280 1495 aa0.33□□□□□ -2.36
SHE3YBR130C TOS6P48560 102 aa0.31□□□□□ -2.36
SHE3YBR130C BCK1Q01389 1478 aa0.3□□□□□ -2.36
SHE3YBR130C TCB3Q03640 1545 aaKnown RBP0.3□□□□□ -2.36
SHE3YBR130C RPS30AP0CX33 63 aaKnown RBP0.3□□□□□ -2.36
SHE3YBR130C RPS30BP0CX34 63 aaKnown RBP0.3□□□□□ -2.36
SHE3YBR130C VPS15P22219 1454 aa0.29□□□□□ -2.36
SHE3YBR130C HAP1P0CE41 1502 aa0.28□□□□□ -2.36
SHE3YBR130C FKS3Q04952 1785 aa0.27□□□□□ -2.37
SHE3YBR130C YIL102C-AQ2V2P5 75 aa0.27□□□□□ -2.37
SHE3YBR130C YOL131WQ08270 108 aa0.26□□□□□ -2.37
SHE3YBR130C YBR230W-AQ3E762 66 aa0.25□□□□□ -2.37
SHE3YBR130C DNF1P32660 1571 aa0.24□□□□□ -2.37
SHE3YBR130C MYO4P32492 1471 aa0.22□□□□□ -2.37
SHE3YBR130C TOR1P35169 2470 aa0.22□□□□□ -2.37
SHE3YBR130C RRP5Q05022 1729 aaKnown RBP0.18□□□□□ -2.38
SHE3YBR130C SPO14P36126 1683 aa0.17□□□□□ -2.38
SHE3YBR130C VMR1P38735 1592 aa0.16□□□□□ -2.38
SHE3YBR130C RPS27BP38711 82 aa0.16□□□□□ -2.38
SHE3YBR130C YLR157W-DP0CE99 70 aa0.15□□□□□ -2.39
SHE3YBR130C YOL166W-AQ8TGJ1 51 aa0.15□□□□□ -2.39
SHE3YBR130C COA2Q3E823 68 aa0.14□□□□□ -2.39
SHE3YBR130C PDR12Q02785 1511 aa0.11□□□□□ -2.39
SHE3YBR130C PDR15Q04182 1529 aaKnown RBP0.1□□□□□ -2.39
SHE3YBR130C YGR146C-AQ8TGT9 53 aa0.1□□□□□ -2.39
SHE3YBR130C YDR524C-BQ3E6R4 66 aa0.08□□□□□ -2.4
SHE3YBR130C VMA9Q3E7B6 73 aa0.07□□□□□ -2.4
SHE3YBR130C YLL006W-AQ3E814 58 aa-0.05□□□□□ -2.42
SHE3YBR130C YFR010W-AP0C5N0 62 aa-0.06□□□□□ -2.42
SHE3YBR130C YGL258W-AQ3E740 77 aa-0.06□□□□□ -2.42
SHE3YBR130C YKL023C-AQ2V2P3 75 aa-0.1□□□□□ -2.43
SHE3YBR130C YOR072W-BQ3E832 53 aa-0.11□□□□□ -2.43
SHE3YBR130C TY1B-DR4Q07793 1604 aa-0.13□□□□□ -2.43
SHE3YBR130C YCF1P39109 1515 aaKnown RBP-0.17□□□□□ -2.44
SHE3YBR130C SNQ2P32568 1501 aaKnown RBP-0.18□□□□□ -2.44
SHE3YBR130C PDR5P33302 1511 aaKnown RBP-0.2□□□□□ -2.44
SHE3YBR130C YOR192C-CQ3E736 78 aa-0.21□□□□□ -2.44
SHE3YBR130C YOR093CQ12275 1648 aa-0.26□□□□□ -2.45
SHE3YBR130C YHR050W-AQ05451 56 aa-0.26□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms