RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 APS2Q00381 147 aa-3.47□□□□□ -2.96
snR56snR56 YCR095W-AQ3E787 52 aa-3.47□□□□□ -2.96
snR56snR56 VTH1P40438 1549 aa-3.48□□□□□ -2.97
snR56snR56 VTH2P40890 1549 aa-3.48□□□□□ -2.97
snR56snR56 SPC24Q04477 213 aa-3.48□□□□□ -2.97
snR56snR56 PAU1P0CE88 120 aa-3.49□□□□□ -2.97
snR56snR56 PAU14P0CE89 120 aa-3.49□□□□□ -2.97
snR56snR56 PAU8P0CE92 120 aa-3.49□□□□□ -2.97
snR56snR56 PAU11P0CE93 120 aa-3.49□□□□□ -2.97
snR56snR56 YBL071CP38185 102 aa-3.49□□□□□ -2.97
snR56snR56 PAU13P38725 120 aa-3.49□□□□□ -2.97
snR56snR56 RBL2P48606 106 aaKnown RBP-3.49□□□□□ -2.97
snR56snR56 PAU10Q03050 120 aa-3.49□□□□□ -2.97
snR56snR56 PAU9Q3E770 120 aa-3.49□□□□□ -2.97
snR56snR56 TY1B-NL2Q99337 1749 aaKnown RBP-3.5□□□□□ -2.97
snR56snR56 SAE3P89114 91 aa-3.51□□□□□ -2.97
snR56snR56 TY1B-ER2Q03619 1755 aa-3.51□□□□□ -2.97
snR56snR56 TY1B-LR1Q12088 1755 aaKnown RBP-3.51□□□□□ -2.97
snR56snR56 SRB6P32570 121 aa-3.52□□□□□ -2.97
snR56snR56 YLR365WQ7LIF2 110 aa-3.52□□□□□ -2.97
snR56snR56 ECM29P38737 1868 aa-3.53□□□□□ -2.97
snR56snR56 UBC5P15732 148 aa-3.54□□□□□ -2.98
snR56snR56 SMD2Q06217 110 aaKnown RBP-3.55□□□□□ -2.98
snR56snR56 YKL018C-AQ3E7A7 99 aa-3.55□□□□□ -2.98
snR56snR56 YOR008C-AQ3E7B9 74 aa-3.55□□□□□ -2.98
snR56snR56 BUD23P25627 275 aaPredicted RBP-3.57□□□□□ -2.98
snR56snR56 PAU4P53427 120 aa-3.57□□□□□ -2.98
snR56snR56 YMR122W-AQ3E842 84 aa-3.57□□□□□ -2.98
snR56snR56 MYO2P19524 1574 aaKnown RBP-3.58□□□□□ -2.98
snR56snR56 YBR032WP38223 100 aa-3.58□□□□□ -2.98
snR56snR56 CMC2Q3E7A4 109 aa-3.58□□□□□ -2.98
snR56snR56 ATP18P81450 59 aa-3.59□□□□□ -2.98
snR56snR56 YCR085WP25650 117 aa-3.6□□□□□ -2.99
snR56snR56 RPS20P38701 121 aaKnown RBP-3.6□□□□□ -2.99
snR56snR56 PAU5P43575 122 aa-3.6□□□□□ -2.99
snR56snR56 GIM4P40005 111 aaKnown RBP-3.61□□□□□ -2.99
snR56snR56 YPR108W-AQ3E7B3 70 aa-3.61□□□□□ -2.99
snR56snR56 RTR2Q12378 196 aa-3.62□□□□□ -2.99
snR56snR56 VMA21P41806 77 aa-3.63□□□□□ -2.99
snR56snR56 TOS6P48560 102 aa-3.63□□□□□ -2.99
snR56snR56 KRE5P22023 1365 aa-3.65□□□□□ -2.99
snR56snR56 YHR214C-DP0CX93 97 aa-3.66□□□□□ -3
snR56snR56 YBR090CP38253 122 aa-3.66□□□□□ -3
snR56snR56 YAL065CO13511 128 aa-3.67□□□□□ -3
snR56snR56 YAR029WP39549 74 aa-3.67□□□□□ -3
snR56snR56 SPC1P46965 94 aa-3.67□□□□□ -3
snR56snR56 LYS2P07702 1392 aa-3.67□□□□□ -3
snR56snR56 TY3B-IQ7LHG5 1498 aaKnown RBP-3.67□□□□□ -3
snR56snR56 YDR278CQ05612 105 aa-3.68□□□□□ -3
snR56snR56 ATG38Q05789 226 aaKnown RBP-3.68□□□□□ -3
snR56snR56 NHP10Q03435 203 aa-3.7□□□□□ -3
snR56snR56 RPB11P38902 120 aa-3.71□□□□□ -3
snR56snR56 SWC7Q06707 132 aa-3.71□□□□□ -3
snR56snR56 EMC5P40540 141 aa-3.75□□□□□ -3.01
snR56snR56 MOT1P32333 1867 aa-3.75□□□□□ -3.01
snR56snR56 RPS27AP35997 82 aaKnown RBP-3.76□□□□□ -3.01
snR56snR56 SIP18P50263 79 aa-3.76□□□□□ -3.01
snR56snR56 BSC4P53841 131 aa-3.77□□□□□ -3.01
snR56snR56 YOR289WQ12012 251 aaPredicted RBP-3.77□□□□□ -3.01
snR56snR56 MRP49P32388 137 aa-3.78□□□□□ -3.01
snR56snR56 SPC2Q04969 178 aa-3.79□□□□□ -3.02
snR56snR56 YOS1Q3E834 85 aa-3.8□□□□□ -3.02
snR56snR56 TLG1Q03322 224 aa-3.81□□□□□ -3.02
snR56snR56 YOL097W-AQ3E7Y9 61 aa-3.81□□□□□ -3.02
snR56snR56 XRN1P22147 1528 aaKnown RBP-3.83□□□□□ -3.02
snR56snR56 GNA1P43577 159 aaPredicted RBP-3.84□□□□□ -3.02
snR56snR56 NKP2Q06162 153 aa-3.85□□□□□ -3.03
snR56snR56 YHL005CP38752 130 aa-3.86□□□□□ -3.03
snR56snR56 YLR099W-AQ3E798 87 aa-3.86□□□□□ -3.03
snR56snR56 IRC20Q06554 1556 aa-3.88□□□□□ -3.03
snR56snR56 RSM19P53733 91 aaPredicted RBP-3.88□□□□□ -3.03
snR56snR56 CHD1P32657 1468 aa-3.9□□□□□ -3.03
snR56snR56 POC4Q12245 148 aaPredicted RBP-3.9□□□□□ -3.03
snR56snR56 UBC4P15731 148 aa-3.91□□□□□ -3.04
snR56snR56 FPR2P32472 135 aa-3.92□□□□□ -3.04
snR56snR56 YMR103CQ04436 120 aa-3.93□□□□□ -3.04
snR56snR56 SMC4Q12267 1418 aa-3.94□□□□□ -3.04
snR56snR56 NHP2P32495 156 aaPredicted RBP-3.95□□□□□ -3.04
snR56snR56 YOR343CQ12484 108 aa-3.95□□□□□ -3.04
snR56snR56 OLI1P61829 76 aa-3.96□□□□□ -3.04
snR56snR56 PAU23Q07987 124 aa-3.96□□□□□ -3.04
snR56snR56 PAU17Q12370 124 aa-3.96□□□□□ -3.04
snR56snR56 SNU13P39990 126 aaKnown RBP-3.97□□□□□ -3.04
snR56snR56 YDR524C-BQ3E6R4 66 aa-3.97□□□□□ -3.04
snR56snR56 UTP10P42945 1769 aaKnown RBP-3.97□□□□□ -3.05
snR56snR56 YLL006W-AQ3E814 58 aa-3.98□□□□□ -3.05
snR56snR56 YKL068W-AQ3E826 78 aa-3.98□□□□□ -3.05
snR56snR56 VMA7P39111 118 aa-3.99□□□□□ -3.05
snR56snR56 PDR11P40550 1411 aa-4□□□□□ -3.05
snR56snR56 HMRA1P0CY11 126 aa-4□□□□□ -3.05
snR56snR56 LSM2P38203 95 aaKnown RBP-4□□□□□ -3.05
snR56snR56 LHP1P33399 275 aaKnown RBP-4.01□□□□□ -3.05
snR56snR56 POL1P13382 1468 aa-4.01□□□□□ -3.05
snR56snR56 DYN2Q02647 92 aa-4.02□□□□□ -3.05
snR56snR56 TY3B-GQ99315 1547 aa-4.03□□□□□ -3.05
snR56snR56 YDR029WQ12111 104 aa-4.03□□□□□ -3.05
snR56snR56 RRT15Q3E811 62 aa-4.03□□□□□ -3.05
snR56snR56 NOP10Q6Q547 58 aaPredicted RBP-4.03□□□□□ -3.05
snR56snR56 YOR394C-AQ8TGJ0 55 aa-4.04□□□□□ -3.06
snR56snR56 SCP1Q08873 200 aa-4.05□□□□□ -3.06
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms