RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 ECM12O13529 151 aa-2.06□□□□□ -2.74
snR54snR54 STT4P37297 1900 aa-2.07□□□□□ -2.74
snR54snR54 SPC1P46965 94 aa-2.07□□□□□ -2.74
snR54snR54 YER039C-AP0CD97 72 aa-2.08□□□□□ -2.74
snR54snR54 YBL044WP38194 122 aa-2.09□□□□□ -2.74
snR54snR54 NHP10Q03435 203 aa-2.09□□□□□ -2.74
snR54snR54 UBC4P15731 148 aa-2.1□□□□□ -2.75
snR54snR54 UBC5P15732 148 aa-2.11□□□□□ -2.75
snR54snR54 TOM6P33448 61 aa-2.11□□□□□ -2.75
snR54snR54 TY3B-IQ7LHG5 1498 aaKnown RBP-2.12□□□□□ -2.75
snR54snR54 SPP41P38904 1435 aa-2.13□□□□□ -2.75
snR54snR54 YBR090CP38253 122 aa-2.13□□□□□ -2.75
snR54snR54 RSM19P53733 91 aaPredicted RBP-2.13□□□□□ -2.75
snR54snR54 TY1B-DR5P0C2I2 1755 aa-2.13□□□□□ -2.75
snR54snR54 TY1B-PR1P0C2I9 1755 aaKnown RBP-2.13□□□□□ -2.75
snR54snR54 TY1B-JR1P47098 1755 aa-2.13□□□□□ -2.75
snR54snR54 TY1B-ML2Q03434 1755 aaKnown RBP-2.13□□□□□ -2.75
snR54snR54 TY1B-ER1Q03612 1755 aa-2.13□□□□□ -2.75
snR54snR54 TY1B-ER2Q03619 1755 aa-2.13□□□□□ -2.75
snR54snR54 TY1B-DR1Q03855 1755 aa-2.13□□□□□ -2.75
snR54snR54 TY1B-ML1Q04711 1755 aaKnown RBP-2.13□□□□□ -2.75
snR54snR54 TY1B-LR1Q12088 1755 aaKnown RBP-2.13□□□□□ -2.75
snR54snR54 TY1B-GR2Q12269 1755 aa-2.13□□□□□ -2.75
snR54snR54 TY1B-OLQ12273 1755 aa-2.13□□□□□ -2.75
snR54snR54 TY1B-DR3Q99231 1755 aa-2.13□□□□□ -2.75
snR54snR54 WIP1Q2V2P8 89 aa-2.14□□□□□ -2.75
snR54snR54 SDH6Q3E785 79 aa-2.14□□□□□ -2.75
snR54snR54 GNA1P43577 159 aaPredicted RBP-2.15□□□□□ -2.75
snR54snR54 YMR103CQ04436 120 aa-2.17□□□□□ -2.76
snR54snR54 MMS1Q06211 1407 aa-2.17□□□□□ -2.76
snR54snR54 YMR122W-AQ3E842 84 aa-2.18□□□□□ -2.76
snR54snR54 YHL005CP38752 130 aa-2.19□□□□□ -2.76
snR54snR54 YBR056W-AI2HB52 66 aa-2.2□□□□□ -2.76
snR54snR54 YMR090WQ04304 227 aaKnown RBP-2.2□□□□□ -2.76
snR54snR54 ECM29P38737 1868 aa-2.2□□□□□ -2.76
snR54snR54 RGI1P40043 161 aaPredicted RBP-2.21□□□□□ -2.76
snR54snR54 EDC1P53080 175 aaPredicted RBP-2.21□□□□□ -2.76
snR54snR54 YOR289WQ12012 251 aaPredicted RBP-2.22□□□□□ -2.76
snR54snR54 ATP18P81450 59 aa-2.23□□□□□ -2.77
snR54snR54 YHR214C-DP0CX93 97 aa-2.24□□□□□ -2.77
snR54snR54 FMP27Q06179 2628 aa-2.25□□□□□ -2.77
snR54snR54 TY2B-LR1P0C2J3 1770 aa-2.26□□□□□ -2.77
snR54snR54 TY2B-FP0CX63 1770 aa-2.26□□□□□ -2.77
snR54snR54 TY2B-GR2P0CX64 1770 aa-2.26□□□□□ -2.77
snR54snR54 TY2B-CP25384 1770 aa-2.26□□□□□ -2.77
snR54snR54 TY2B-DR2Q03494 1770 aa-2.26□□□□□ -2.77
snR54snR54 TY2B-DR3Q07791 1770 aaKnown RBP-2.26□□□□□ -2.77
snR54snR54 TY2B-OR1Q12113 1770 aa-2.26□□□□□ -2.77
snR54snR54 TY2B-DR1Q12472 1770 aa-2.26□□□□□ -2.77
snR54snR54 TY2B-BQ12491 1770 aa-2.26□□□□□ -2.77
snR54snR54 TY2B-OR2Q12501 1770 aa-2.26□□□□□ -2.77
snR54snR54 MOT1P32333 1867 aa-2.26□□□□□ -2.77
snR54snR54 EMC5P40540 141 aa-2.26□□□□□ -2.77
snR54snR54 YMR001C-AQ8TGS9 76 aa-2.26□□□□□ -2.77
snR54snR54 YAL065CO13511 128 aa-2.27□□□□□ -2.77
snR54snR54 BSC4P53841 131 aa-2.27□□□□□ -2.77
snR54snR54 HMRA1P0CY11 126 aa-2.29□□□□□ -2.78
snR54snR54 RRT15Q3E811 62 aa-2.32□□□□□ -2.78
snR54snR54 KSH1Q8TGJ3 72 aa-2.32□□□□□ -2.78
snR54snR54 GEA1P47102 1408 aaPredicted RBP-2.33□□□□□ -2.78
snR54snR54 YCR085WP25650 117 aa-2.33□□□□□ -2.78
snR54snR54 YPR108W-AQ3E7B3 70 aa-2.33□□□□□ -2.78
snR54snR54 YOR304C-AO14468 76 aa-2.34□□□□□ -2.78
snR54snR54 LHP1P33399 275 aaKnown RBP-2.35□□□□□ -2.79
snR54snR54 TOR2P32600 2474 aaKnown RBP-2.35□□□□□ -2.79
snR54snR54 YBR032WP38223 100 aa-2.36□□□□□ -2.79
snR54snR54 SNU13P39990 126 aaKnown RBP-2.36□□□□□ -2.79
snR54snR54 PDR11P40550 1411 aa-2.38□□□□□ -2.79
snR54snR54 RPA190P10964 1664 aaKnown RBP-2.38□□□□□ -2.79
snR54snR54 YPR117WQ06116 2489 aa-2.41□□□□□ -2.79
snR54snR54 TSC11P40061 1430 aa-2.41□□□□□ -2.79
snR54snR54 POL1P13382 1468 aa-2.42□□□□□ -2.8
snR54snR54 FPR2P32472 135 aa-2.45□□□□□ -2.8
snR54snR54 UTP10P42945 1769 aaKnown RBP-2.46□□□□□ -2.8
snR54snR54 YDR029WQ12111 104 aa-2.46□□□□□ -2.8
snR54snR54 RPS12P48589 143 aaKnown RBP-2.47□□□□□ -2.8
snR54snR54 REV3P14284 1504 aa-2.47□□□□□ -2.81
snR54snR54 XRN1P22147 1528 aaKnown RBP-2.47□□□□□ -2.81
snR54snR54 PAU23Q07987 124 aa-2.48□□□□□ -2.81
snR54snR54 PAU17Q12370 124 aa-2.48□□□□□ -2.81
snR54snR54 NHP2P32495 156 aaPredicted RBP-2.49□□□□□ -2.81
snR54snR54 YDR182W-AQ3E796 67 aa-2.49□□□□□ -2.81
snR54snR54 YOL097W-AQ3E7Y9 61 aa-2.51□□□□□ -2.81
snR54snR54 TEL1P38110 2787 aa-2.52□□□□□ -2.81
snR54snR54 GEA2P39993 1459 aaKnown RBP-2.52□□□□□ -2.81
snR54snR54 SPO14P36126 1683 aa-2.53□□□□□ -2.81
snR54snR54 VTH1P40438 1549 aa-2.56□□□□□ -2.82
snR54snR54 VTH2P40890 1549 aa-2.56□□□□□ -2.82
snR54snR54 MHF2Q3E829 80 aa-2.56□□□□□ -2.82
snR54snR54 TY1B-NL2Q99337 1749 aaKnown RBP-2.56□□□□□ -2.82
snR54snR54 YER137CP40083 148 aaKnown RBP-2.58□□□□□ -2.82
snR54snR54 NOP10Q6Q547 58 aaPredicted RBP-2.58□□□□□ -2.82
snR54snR54 MSL1P40567 111 aaPredicted RBP-2.59□□□□□ -2.82
snR54snR54 YDR042CQ03205 200 aa-2.59□□□□□ -2.82
snR54snR54 FYV7Q12247 151 aa-2.59□□□□□ -2.82
snR54snR54 YKL018C-AQ3E7A7 99 aa-2.59□□□□□ -2.82
snR54snR54 GDB1Q06625 1536 aa-2.59□□□□□ -2.82
snR54snR54 MEC1P38111 2368 aa-2.6□□□□□ -2.83
snR54snR54 YKL068W-AQ3E826 78 aa-2.61□□□□□ -2.83
snR54snR54 YOR008C-AQ3E7B9 74 aa-2.62□□□□□ -2.83
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms