RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W YNL146C-AQ3E7Z1 64 aa4.01□□□□□ -1.77
CIT3YPR001W SSS1P35179 80 aa3.99□□□□□ -1.77
CIT3YPR001W AIM4P38305 123 aaPredicted RBP3.99□□□□□ -1.77
CIT3YPR001W GCV3P39726 170 aaPredicted RBP3.99□□□□□ -1.77
CIT3YPR001W PRM3Q08931 133 aa3.99□□□□□ -1.77
CIT3YPR001W TY1B-NL2Q99337 1749 aaKnown RBP3.99□□□□□ -1.77
CIT3YPR001W TY4B-HP0C2J7 1802 aa3.99□□□□□ -1.77
CIT3YPR001W TY4B-JP47024 1803 aa3.99□□□□□ -1.77
CIT3YPR001W YCL042WP25572 119 aa3.98□□□□□ -1.77
CIT3YPR001W YLR285C-AQ3E771 56 aa3.98□□□□□ -1.77
CIT3YPR001W YBR013CP38215 129 aa3.98□□□□□ -1.77
CIT3YPR001W RSM18P40033 138 aa3.98□□□□□ -1.77
CIT3YPR001W PAU5P43575 122 aa3.98□□□□□ -1.77
CIT3YPR001W CWP2P43497 92 aa3.97□□□□□ -1.77
CIT3YPR001W GIS2P53849 153 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
CIT3YPR001W SWM2P40342 146 aa3.96□□□□□ -1.78
CIT3YPR001W YMR321CQ04898 105 aa3.96□□□□□ -1.78
CIT3YPR001W YIL163CP40448 117 aa3.95□□□□□ -1.78
CIT3YPR001W ROX3P25046 220 aa3.94□□□□□ -1.78
CIT3YPR001W VMA9Q3E7B6 73 aa3.94□□□□□ -1.78
CIT3YPR001W RPS22AP0C0W1 130 aaKnown RBP3.93□□□□□ -1.78
CIT3YPR001W ICY1Q04329 127 aa3.93□□□□□ -1.78
CIT3YPR001W LSM6Q06406 86 aaKnown RBP3.93□□□□□ -1.78
CIT3YPR001W ENV10Q99382 181 aa3.93□□□□□ -1.78
CIT3YPR001W ACC1Q00955 2233 aaKnown RBP3.92□□□□□ -1.78
CIT3YPR001W YSF3P0C074 85 aaPredicted RBP3.92□□□□□ -1.78
CIT3YPR001W IMP2P46972 177 aa3.92□□□□□ -1.78
CIT3YPR001W YCL048W-AQ2V2Q2 79 aa3.92□□□□□ -1.78
CIT3YPR001W YFL065CP43539 102 aa3.91□□□□□ -1.78
CIT3YPR001W YPR145C-AQ2V2P0 78 aa3.91□□□□□ -1.78
CIT3YPR001W YMR175W-AQ3E766 64 aa3.91□□□□□ -1.78
CIT3YPR001W SLH1P53327 1967 aaKnown RBP3.9□□□□□ -1.79
CIT3YPR001W YCR085WP25650 117 aa3.9□□□□□ -1.79
CIT3YPR001W IRC21Q04772 201 aa3.88□□□□□ -1.79
CIT3YPR001W YCR095W-AQ3E787 52 aa3.88□□□□□ -1.79
CIT3YPR001W YNR034W-AQ3E841 98 aa3.87□□□□□ -1.79
CIT3YPR001W YIL134C-AQ45U18 67 aa3.87□□□□□ -1.79
CIT3YPR001W FKS3Q04952 1785 aa3.87□□□□□ -1.79
CIT3YPR001W RPA12P32529 125 aaKnown RBP3.86□□□□□ -1.79
CIT3YPR001W VPS55P47111 140 aa3.86□□□□□ -1.79
CIT3YPR001W POC4Q12245 148 aaPredicted RBP3.86□□□□□ -1.79
CIT3YPR001W MOT1P32333 1867 aa3.86□□□□□ -1.79
CIT3YPR001W YHL037CP38733 133 aa3.86□□□□□ -1.79
CIT3YPR001W ICS3P47034 131 aa3.86□□□□□ -1.79
CIT3YPR001W YOL118CQ08259 102 aa3.86□□□□□ -1.79
CIT3YPR001W YPR203WQ08994 102 aa3.86□□□□□ -1.79
CIT3YPR001W YOL131WQ08270 108 aa3.85□□□□□ -1.79
CIT3YPR001W MHF2Q3E829 80 aa3.85□□□□□ -1.79
CIT3YPR001W CCW12Q12127 133 aa3.84□□□□□ -1.8
CIT3YPR001W YGL041C-BQ3E750 60 aa3.84□□□□□ -1.8
CIT3YPR001W SNA2P56508 79 aa3.83□□□□□ -1.8
CIT3YPR001W PAU23Q07987 124 aa3.83□□□□□ -1.8
CIT3YPR001W PAU17Q12370 124 aa3.83□□□□□ -1.8
CIT3YPR001W LSM2P38203 95 aaKnown RBP3.82□□□□□ -1.8
CIT3YPR001W RPS22BQ3E7Y3 130 aaKnown RBP3.82□□□□□ -1.8
CIT3YPR001W PAI3P01094 68 aa3.8□□□□□ -1.8
CIT3YPR001W CCW14O13547 238 aa3.79□□□□□ -1.8
CIT3YPR001W MRP17P28778 131 aa3.79□□□□□ -1.8
CIT3YPR001W NHP2P32495 156 aaPredicted RBP3.79□□□□□ -1.8
CIT3YPR001W TOM6P33448 61 aa3.78□□□□□ -1.8
CIT3YPR001W SPC1P46965 94 aa3.78□□□□□ -1.8
CIT3YPR001W MRPL38P35996 138 aaPredicted RBP3.77□□□□□ -1.81
CIT3YPR001W MIC27P50945 234 aa3.77□□□□□ -1.81
CIT3YPR001W YJL009WP47078 108 aa3.76□□□□□ -1.81
CIT3YPR001W LCL2Q08045 131 aa3.76□□□□□ -1.81
CIT3YPR001W YGR240C-AQ3E786 66 aa3.75□□□□□ -1.81
CIT3YPR001W PAU6P0CE90 120 aa3.74□□□□□ -1.81
CIT3YPR001W PAU18P0CE91 120 aa3.74□□□□□ -1.81
CIT3YPR001W MRPS12P53732 153 aa3.74□□□□□ -1.81
CIT3YPR001W COX19Q3E731 98 aa3.74□□□□□ -1.81
CIT3YPR001W YBL071CP38185 102 aa3.73□□□□□ -1.81
CIT3YPR001W YNL122CP53921 115 aaPredicted RBP3.73□□□□□ -1.81
CIT3YPR001W YKL018C-AQ3E7A7 99 aa3.73□□□□□ -1.81
CIT3YPR001W YHR212W-AP0CX91 67 aa3.73□□□□□ -1.81
CIT3YPR001W RIM15P43565 1770 aa3.73□□□□□ -1.81
CIT3YPR001W YPL038W-AQ3E7B4 63 aa3.72□□□□□ -1.81
CIT3YPR001W BRR2P32639 2163 aaKnown RBP3.7□□□□□ -1.82
CIT3YPR001W HKR1P41809 1802 aa3.7□□□□□ -1.82
CIT3YPR001W YNL198CP40166 100 aa3.7□□□□□ -1.82
CIT3YPR001W YDR210WQ03482 75 aa3.7□□□□□ -1.82
CIT3YPR001W YOR343CQ12484 108 aa3.7□□□□□ -1.82
CIT3YPR001W AQY2P0CD90 149 aa3.69□□□□□ -1.82
CIT3YPR001W MRX7P53869 86 aa3.69□□□□□ -1.82
CIT3YPR001W ECM29P38737 1868 aa3.68□□□□□ -1.82
CIT3YPR001W COX12Q01519 83 aa3.67□□□□□ -1.82
CIT3YPR001W YIL102C-AQ2V2P5 75 aa3.67□□□□□ -1.82
CIT3YPR001W YDR381C-AQ3E6R5 114 aa3.67□□□□□ -1.82
CIT3YPR001W YHR214C-DP0CX93 97 aa3.66□□□□□ -1.82
CIT3YPR001W MRPL31P14063 131 aaPredicted RBP3.66□□□□□ -1.82
CIT3YPR001W ATX1P38636 73 aa3.66□□□□□ -1.82
CIT3YPR001W YLR146W-AQ2V2P1 62 aa3.66□□□□□ -1.82
CIT3YPR001W YDR119W-AQ2V2P9 66 aa3.66□□□□□ -1.82
CIT3YPR001W YBR292CP38357 123 aa3.65□□□□□ -1.83
CIT3YPR001W YOR072WQ08486 104 aa3.65□□□□□ -1.83
CIT3YPR001W YAR064WP39563 99 aa3.64□□□□□ -1.83
CIT3YPR001W AIM19P40502 157 aa3.64□□□□□ -1.83
CIT3YPR001W FLO1P32768 1537 aa3.63□□□□□ -1.83
CIT3YPR001W HFA1P32874 2273 aa3.61□□□□□ -1.83
CIT3YPR001W PAU1P0CE88 120 aa3.61□□□□□ -1.83
CIT3YPR001W PAU14P0CE89 120 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms