RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A MRPL38P35996 138 aaPredicted RBP0.46□□□□□ -2.34
YOR343W-AYOR343W-A YDR210WQ03482 75 aa0.46□□□□□ -2.34
YOR343W-AYOR343W-A YIL134C-AQ45U18 67 aa0.46□□□□□ -2.34
YOR343W-AYOR343W-A YCL001W-BQ96VH2 84 aa0.46□□□□□ -2.34
YOR343W-AYOR343W-A YHR214C-DP0CX93 97 aa0.45□□□□□ -2.34
YOR343W-AYOR343W-A YOR289WQ12012 251 aaPredicted RBP0.45□□□□□ -2.34
YOR343W-AYOR343W-A YDR029WQ12111 104 aa0.45□□□□□ -2.34
YOR343W-AYOR343W-A TOM6P33448 61 aa0.44□□□□□ -2.34
YOR343W-AYOR343W-A SPC1P46965 94 aa0.44□□□□□ -2.34
YOR343W-AYOR343W-A SGF11Q03067 99 aa0.44□□□□□ -2.34
YOR343W-AYOR343W-A NHP10Q03435 203 aa0.44□□□□□ -2.34
YOR343W-AYOR343W-A YKL068W-AQ3E826 78 aa0.44□□□□□ -2.34
YOR343W-AYOR343W-A KSH1Q8TGJ3 72 aa0.44□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-PR2P0C2J0 1756 aa0.44□□□□□ -2.34
YOR343W-AYOR343W-A YFR009W-AP0C5M9 85 aa0.43□□□□□ -2.34
YOR343W-AYOR343W-A RPC10P40422 70 aa0.43□□□□□ -2.34
YOR343W-AYOR343W-A BSC4P53841 131 aa0.43□□□□□ -2.34
YOR343W-AYOR343W-A Q0032Q9ZZX7 96 aa0.43□□□□□ -2.34
YOR343W-AYOR343W-A YNL042W-BQ3E7Z2 85 aa0.42□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-LR3P0C2I6 1755 aaKnown RBP0.42□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-PR3P0C2J1 1755 aaKnown RBP0.42□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-DR6P0C2I3 1755 aa0.41□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-LR2P0C2I5 1755 aa0.41□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-JR2P47100 1755 aaKnown RBP0.41□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-MR1Q04214 1755 aa0.41□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-MR2Q04670 1755 aaKnown RBP0.41□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-NL1Q12112 1755 aa0.41□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-GR1Q12141 1755 aa0.41□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-GR3Q12316 1755 aa0.41□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-PLQ12414 1755 aaKnown RBP0.41□□□□□ -2.34
YOR343W-AYOR343W-A TY1B-ORQ92393 1755 aa0.41□□□□□ -2.34
YOR343W-AYOR343W-A ECM29P38737 1868 aa0.41□□□□□ -2.34
YOR343W-AYOR343W-A SWR1Q05471 1514 aa0.41□□□□□ -2.34
YOR343W-AYOR343W-A SDH6Q3E785 79 aa0.4□□□□□ -2.34
YOR343W-AYOR343W-A HKR1P41809 1802 aa0.4□□□□□ -2.35
YOR343W-AYOR343W-A FPR2P32472 135 aa0.39□□□□□ -2.35
YOR343W-AYOR343W-A ATP18P81450 59 aa0.38□□□□□ -2.35
YOR343W-AYOR343W-A YBR201C-AQ2V2Q3 67 aa0.38□□□□□ -2.35
YOR343W-AYOR343W-A DNF3Q12674 1656 aa0.38□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-DR5P0C2I2 1755 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-PR1P0C2I9 1755 aaKnown RBP0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-JR1P47098 1755 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-ML2Q03434 1755 aaKnown RBP0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-ER1Q03612 1755 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-ER2Q03619 1755 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-DR1Q03855 1755 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-ML1Q04711 1755 aaKnown RBP0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-LR1Q12088 1755 aaKnown RBP0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-GR2Q12269 1755 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-OLQ12273 1755 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A TY1B-DR3Q99231 1755 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A ECM12O13529 151 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A YDR381C-AQ3E6R5 114 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A YOL097W-AQ3E7Y9 61 aa0.37□□□□□ -2.35
YOR343W-AYOR343W-A STT4P37297 1900 aa0.36□□□□□ -2.35
YOR343W-AYOR343W-A YAL065CO13511 128 aa0.36□□□□□ -2.35
YOR343W-AYOR343W-A YCR085WP25650 117 aa0.36□□□□□ -2.35
YOR343W-AYOR343W-A SCP1Q08873 200 aa0.36□□□□□ -2.35
YOR343W-AYOR343W-A BPH1P25356 2167 aa0.35□□□□□ -2.35
YOR343W-AYOR343W-A YDR042CQ03205 200 aa0.35□□□□□ -2.35
YOR343W-AYOR343W-A RRT15Q3E811 62 aa0.35□□□□□ -2.35
YOR343W-AYOR343W-A GDB1Q06625 1536 aa0.35□□□□□ -2.35
YOR343W-AYOR343W-A YBR016WP38216 128 aa0.34□□□□□ -2.36
YOR343W-AYOR343W-A MLP1Q02455 1875 aaKnown RBP0.33□□□□□ -2.36
YOR343W-AYOR343W-A PMD1P32634 1753 aa0.33□□□□□ -2.36
YOR343W-AYOR343W-A YBR032WP38223 100 aa0.33□□□□□ -2.36
YOR343W-AYOR343W-A APC1P53886 1748 aa0.33□□□□□ -2.36
YOR343W-AYOR343W-A PAU23Q07987 124 aa0.33□□□□□ -2.36
YOR343W-AYOR343W-A YOR105WQ08504 108 aa0.33□□□□□ -2.36
YOR343W-AYOR343W-A PAU17Q12370 124 aa0.33□□□□□ -2.36
YOR343W-AYOR343W-A YPR108W-AQ3E7B3 70 aa0.33□□□□□ -2.36
YOR343W-AYOR343W-A YMR122W-AQ3E842 84 aa0.33□□□□□ -2.36
YOR343W-AYOR343W-A EDC1P53080 175 aaPredicted RBP0.32□□□□□ -2.36
YOR343W-AYOR343W-A YGR025WP53216 100 aa0.32□□□□□ -2.36
YOR343W-AYOR343W-A PDR10P51533 1564 aa0.31□□□□□ -2.36
YOR343W-AYOR343W-A YOR343CQ12484 108 aa0.31□□□□□ -2.36
YOR343W-AYOR343W-A YCR075W-AQ3E830 75 aa0.31□□□□□ -2.36
YOR343W-AYOR343W-A UTP10P42945 1769 aaKnown RBP0.3□□□□□ -2.36
YOR343W-AYOR343W-A POL1P13382 1468 aa0.29□□□□□ -2.36
YOR343W-AYOR343W-A YKL065W-AQ2V2P2 73 aa0.29□□□□□ -2.36
YOR343W-AYOR343W-A ESC1Q03661 1658 aaKnown RBP0.27□□□□□ -2.37
YOR343W-AYOR343W-A SEN1Q00416 2231 aaKnown RBP0.27□□□□□ -2.37
YOR343W-AYOR343W-A XRN1P22147 1528 aaKnown RBP0.27□□□□□ -2.37
YOR343W-AYOR343W-A YMR082CQ04276 118 aa0.26□□□□□ -2.37
YOR343W-AYOR343W-A YDR246W-AQ3E763 66 aa0.26□□□□□ -2.37
YOR343W-AYOR343W-A NOP10Q6Q547 58 aaPredicted RBP0.26□□□□□ -2.37
YOR343W-AYOR343W-A SKI3P17883 1432 aaKnown RBP0.26□□□□□ -2.37
YOR343W-AYOR343W-A YCR108CQ3E819 63 aa0.25□□□□□ -2.37
YOR343W-AYOR343W-A LTE1P07866 1435 aa0.25□□□□□ -2.37
YOR343W-AYOR343W-A OLI1P61829 76 aa0.24□□□□□ -2.37
YOR343W-AYOR343W-A MMS1Q06211 1407 aa0.23□□□□□ -2.37
YOR343W-AYOR343W-A YLR146W-AQ2V2P1 62 aa0.23□□□□□ -2.37
YOR343W-AYOR343W-A MMS22Q06164 1454 aa0.22□□□□□ -2.37
YOR343W-AYOR343W-A YOR314WQ12506 109 aa0.22□□□□□ -2.37
YOR343W-AYOR343W-A YGL194C-AQ2V2P6 80 aa0.22□□□□□ -2.37
YOR343W-AYOR343W-A YMR001C-AQ8TGS9 76 aa0.22□□□□□ -2.37
YOR343W-AYOR343W-A KOG1P38873 1557 aa0.22□□□□□ -2.37
YOR343W-AYOR343W-A LSM2P38203 95 aaKnown RBP0.21□□□□□ -2.38
YOR343W-AYOR343W-A CWP2P43497 92 aa0.21□□□□□ -2.38
YOR343W-AYOR343W-A YOR008C-AQ3E7B9 74 aa0.21□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms