RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C YNL146C-AQ3E7Z1 64 aa7.2□□□□□ -1.26
SPT20YOL148C YML122CQ03207 126 aa7.19□□□□□ -1.26
SPT20YOL148C YOR034C-AQ3E735 80 aa7.19□□□□□ -1.26
SPT20YOL148C YOR011W-AQ3E807 68 aa7.19□□□□□ -1.26
SPT20YOL148C BPH1P25356 2167 aa7.18□□□□□ -1.26
SPT20YOL148C YJR107C-AP0CT86 78 aa7.18□□□□□ -1.26
SPT20YOL148C ERG28P40030 148 aa7.17□□□□□ -1.26
SPT20YOL148C YLR236CA0A023PZG4 107 aa7.16□□□□□ -1.26
SPT20YOL148C SAP30P38429 201 aa7.16□□□□□ -1.26
SPT20YOL148C YER135CP40082 130 aa7.16□□□□□ -1.26
SPT20YOL148C ALG13P53178 202 aa7.16□□□□□ -1.26
SPT20YOL148C RPL11AP0C0W9 174 aaKnown RBP7.15□□□□□ -1.26
SPT20YOL148C BET1P22804 142 aa7.15□□□□□ -1.26
SPT20YOL148C YRA2P36036 203 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
SPT20YOL148C RPR2P40571 144 aa7.15□□□□□ -1.27
SPT20YOL148C YMR175W-AQ3E766 64 aa7.15□□□□□ -1.27
SPT20YOL148C YDR034W-BQ6Q5X2 51 aa7.15□□□□□ -1.27
SPT20YOL148C YLR156WP0CE96 114 aa7.13□□□□□ -1.27
SPT20YOL148C YLR159WP0CE97 114 aa7.13□□□□□ -1.27
SPT20YOL148C YLR161WP0CE98 114 aa7.13□□□□□ -1.27
SPT20YOL148C YPR013CQ12145 317 aa7.13□□□□□ -1.27
SPT20YOL148C COX14P39103 70 aa7.13□□□□□ -1.27
SPT20YOL148C MIG3P39943 394 aa7.13□□□□□ -1.27
SPT20YOL148C HAL1Q01766 294 aa7.13□□□□□ -1.27
SPT20YOL148C YLR281CQ05863 155 aa7.13□□□□□ -1.27
SPT20YOL148C YLR412C-AQ3E742 68 aa7.13□□□□□ -1.27
SPT20YOL148C RPL11BQ3E757 174 aaPredicted RBP7.13□□□□□ -1.27
SPT20YOL148C PMP3P87284 55 aa7.12□□□□□ -1.27
SPT20YOL148C YMR295CQ03559 197 aa7.12□□□□□ -1.27
SPT20YOL148C AIM4P38305 123 aaPredicted RBP7.11□□□□□ -1.27
SPT20YOL148C YAR029WP39549 74 aa7.11□□□□□ -1.27
SPT20YOL148C YFR035CP43608 114 aa7.11□□□□□ -1.27
SPT20YOL148C YDR246W-AQ3E763 66 aa7.11□□□□□ -1.27
SPT20YOL148C KSH1Q8TGJ3 72 aa7.11□□□□□ -1.27
SPT20YOL148C ATP20Q12233 115 aa7.1□□□□□ -1.27
SPT20YOL148C YLL006W-AQ3E814 58 aa7.1□□□□□ -1.27
SPT20YOL148C IRA2P19158 3079 aa7.09□□□□□ -1.27
SPT20YOL148C UBC4P15731 148 aa7.09□□□□□ -1.27
SPT20YOL148C COX17Q12287 69 aa7.09□□□□□ -1.27
SPT20YOL148C YGR164WP53291 111 aa7.08□□□□□ -1.28
SPT20YOL148C ATP18P81450 59 aa7.08□□□□□ -1.28
SPT20YOL148C YKL183C-AQ3E765 70 aa7.08□□□□□ -1.28
SPT20YOL148C EDC1P53080 175 aaPredicted RBP7.07□□□□□ -1.28
SPT20YOL148C TOS8P53147 276 aa7.07□□□□□ -1.28
SPT20YOL148C YMR244WQ04018 355 aa7.07□□□□□ -1.28
SPT20YOL148C VAM10Q08474 114 aa7.06□□□□□ -1.28
SPT20YOL148C MPC3P53311 146 aa7.06□□□□□ -1.28
SPT20YOL148C GAT4P40569 121 aa7.05□□□□□ -1.28
SPT20YOL148C RSM19P53733 91 aaPredicted RBP7.05□□□□□ -1.28
SPT20YOL148C MRPS8Q03799 155 aa7.05□□□□□ -1.28
SPT20YOL148C SRL1Q08673 210 aa7.04□□□□□ -1.28
SPT20YOL148C SPS100P13130 326 aa7.04□□□□□ -1.28
SPT20YOL148C YBR219CP38317 127 aa7.03□□□□□ -1.28
SPT20YOL148C RPL38P49167 78 aaKnown RBP7.03□□□□□ -1.28
SPT20YOL148C SPG4Q04438 115 aa7.03□□□□□ -1.28
SPT20YOL148C ICY1Q04329 127 aa7.01□□□□□ -1.29
SPT20YOL148C ERI1P62651 68 aaKnown RBP7.01□□□□□ -1.29
SPT20YOL148C YMR320WQ04897 101 aa7.01□□□□□ -1.29
SPT20YOL148C TSC3Q3E790 80 aa7.01□□□□□ -1.29
SPT20YOL148C CSF1Q12150 2958 aa7.01□□□□□ -1.29
SPT20YOL148C TDA2P40045 126 aa7□□□□□ -1.29
SPT20YOL148C YOR314WQ12506 109 aa7□□□□□ -1.29
SPT20YOL148C YAL065CO13511 128 aa6.99□□□□□ -1.29
SPT20YOL148C YFL019CP43576 117 aa6.99□□□□□ -1.29
SPT20YOL148C MRP10O75012 95 aa6.99□□□□□ -1.29
SPT20YOL148C RSM18P40033 138 aa6.99□□□□□ -1.29
SPT20YOL148C YFR009W-AP0C5M9 85 aa6.98□□□□□ -1.29
SPT20YOL148C HOR7Q05827 59 aa6.98□□□□□ -1.29
SPT20YOL148C TDA8Q6B2U8 126 aa6.98□□□□□ -1.29
SPT20YOL148C YIR020CP40575 100 aa6.96□□□□□ -1.3
SPT20YOL148C NOP10Q6Q547 58 aaPredicted RBP6.96□□□□□ -1.3
SPT20YOL148C RPS11AP0CX47 156 aaKnown RBP6.95□□□□□ -1.3
SPT20YOL148C RPS11BP0CX48 156 aaKnown RBP6.95□□□□□ -1.3
SPT20YOL148C YDR182W-AQ3E796 67 aa6.94□□□□□ -1.3
SPT20YOL148C SFT1P43682 97 aa6.94□□□□□ -1.3
SPT20YOL148C YNL277W-AQ3E7Z0 62 aa6.94□□□□□ -1.3
SPT20YOL148C RPL29P05747 59 aaPredicted RBP6.93□□□□□ -1.3
SPT20YOL148C YPS5P53057 165 aa6.93□□□□□ -1.3
SPT20YOL148C RPL36BO14455 100 aaKnown RBP6.92□□□□□ -1.3
SPT20YOL148C RPL36AP05745 100 aaPredicted RBP6.92□□□□□ -1.3
SPT20YOL148C CRC1Q12289 327 aa6.92□□□□□ -1.3
SPT20YOL148C YMR122W-AQ3E842 84 aa6.92□□□□□ -1.3
SPT20YOL148C RPL26AP05743 127 aaKnown RBP6.9□□□□□ -1.3
SPT20YOL148C RPL26BP53221 127 aaKnown RBP6.9□□□□□ -1.3
SPT20YOL148C TMC1Q08422 150 aaPredicted RBP6.9□□□□□ -1.31
SPT20YOL148C TAR1Q8TGM6 124 aa6.9□□□□□ -1.31
SPT20YOL148C TIM10P87108 93 aa6.89□□□□□ -1.31
SPT20YOL148C YGL260WP53056 76 aa6.88□□□□□ -1.31
SPT20YOL148C YLR162WQ06235 118 aa6.88□□□□□ -1.31
SPT20YOL148C YDL241WQ07738 123 aa6.88□□□□□ -1.31
SPT20YOL148C SMD1Q02260 146 aaPredicted RBP6.87□□□□□ -1.31
SPT20YOL148C AIR2Q12476 344 aaKnown RBP6.87□□□□□ -1.31
SPT20YOL148C YBR182C-AQ8TGU6 64 aa6.87□□□□□ -1.31
SPT20YOL148C MVB12P42939 101 aa6.87□□□□□ -1.31
SPT20YOL148C ICS3P47034 131 aa6.87□□□□□ -1.31
SPT20YOL148C YHL005CP38752 130 aa6.86□□□□□ -1.31
SPT20YOL148C YOR268CQ08734 132 aa6.86□□□□□ -1.31
SPT20YOL148C YOL166W-AQ8TGJ1 51 aa6.86□□□□□ -1.31
SPT20YOL148C YBR126W-AQ8TGU7 68 aa6.86□□□□□ -1.31
SPT20YOL148C YOR381W-AQ3E804 55 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 774.2 ms