RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W BRP1P53194 125 aa2.61□□□□□ -1.99
PUB1YNL016W PAU12P53343 120 aa2.61□□□□□ -1.99
PUB1YNL016W CYT2Q00873 224 aa2.61□□□□□ -1.99
PUB1YNL016W YPL261CQ08976 102 aa2.61□□□□□ -1.99
PUB1YNL016W DAD1Q12248 94 aa2.61□□□□□ -1.99
PUB1YNL016W CMC4Q3E7A9 73 aa2.61□□□□□ -1.99
PUB1YNL016W YOS1Q3E834 85 aa2.61□□□□□ -1.99
PUB1YNL016W MRPL11P36521 249 aaPredicted RBP2.6□□□□□ -1.99
PUB1YNL016W HUR1P45820 110 aa2.6□□□□□ -1.99
PUB1YNL016W HMRA1P0CY11 126 aa2.59□□□□□ -2
PUB1YNL016W MSL1P40567 111 aaPredicted RBP2.59□□□□□ -2
PUB1YNL016W VMA21P41806 77 aa2.59□□□□□ -2
PUB1YNL016W PAU2P32612 120 aa2.58□□□□□ -2
PUB1YNL016W PDX3P38075 228 aaKnown RBP2.58□□□□□ -2
PUB1YNL016W YEL014CP39999 101 aa2.58□□□□□ -2
PUB1YNL016W GIS2P53849 153 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
PUB1YNL016W SEN15Q04675 128 aa2.58□□□□□ -2
PUB1YNL016W PRM3Q08931 133 aa2.58□□□□□ -2
PUB1YNL016W RPB7P34087 171 aa2.57□□□□□ -2
PUB1YNL016W RPL13BP40212 199 aaKnown RBP2.57□□□□□ -2
PUB1YNL016W YLR296WQ05898 108 aa2.57□□□□□ -2
PUB1YNL016W OST5Q92316 86 aa2.57□□□□□ -2
PUB1YNL016W YKR045CP36138 183 aa2.56□□□□□ -2
PUB1YNL016W PAU24P38155 120 aa2.56□□□□□ -2
PUB1YNL016W ATG8P38182 117 aaRIP-Chip data2.56□□□□□ -2not detected
PUB1YNL016W RSM19P53733 91 aaPredicted RBP2.56□□□□□ -2
PUB1YNL016W YIL014C-AQ02598 104 aa2.56□□□□□ -2
PUB1YNL016W AVO2Q04749 426 aa2.56□□□□□ -2
PUB1YNL016W YHR007C-AQ07074 71 aa2.56□□□□□ -2
PUB1YNL016W ECM12O13529 151 aa2.55□□□□□ -2
PUB1YNL016W RTC6O14464 93 aa2.55□□□□□ -2
PUB1YNL016W PAU19P0CE85 124 aa2.55□□□□□ -2
PUB1YNL016W PAU3P25610 124 aa2.55□□□□□ -2
PUB1YNL016W DSE2P38844 325 aa2.55□□□□□ -2
PUB1YNL016W PCC1Q3E833 88 aa2.55□□□□□ -2
PUB1YNL016W RPL36BO14455 100 aaKnown RBP2.54□□□□□ -2
PUB1YNL016W RPL36AP05745 100 aaPredicted RBP2.54□□□□□ -2
PUB1YNL016W NRG2P38082 220 aa2.54□□□□□ -2
PUB1YNL016W MPC2P38857 129 aa2.54□□□□□ -2
PUB1YNL016W SNN1P48232 102 aa2.54□□□□□ -2
PUB1YNL016W YLR194CQ05777 254 aa2.54□□□□□ -2
PUB1YNL016W YOL118CQ08259 102 aa2.54□□□□□ -2
PUB1YNL016W YOR192C-CQ3E736 78 aa2.54□□□□□ -2
PUB1YNL016W YMR082CQ04276 118 aa2.53□□□□□ -2
PUB1YNL016W HPA2Q06592 156 aa2.53□□□□□ -2
PUB1YNL016W RRT15Q3E811 62 aa2.53□□□□□ -2
PUB1YNL016W COX9P07255 59 aa2.52□□□□□ -2.01
PUB1YNL016W FMT1P32785 401 aa2.52□□□□□ -2.01
PUB1YNL016W ROX3P25046 220 aa2.51□□□□□ -2.01
PUB1YNL016W SRB6P32570 121 aa2.51□□□□□ -2.01
PUB1YNL016W PAU16P35994 123 aa2.51□□□□□ -2.01
PUB1YNL016W YHR138CP38841 114 aaPredicted RBP2.51□□□□□ -2.01
PUB1YNL016W PAU15P40585 124 aa2.51□□□□□ -2.01
PUB1YNL016W TAR1Q8TGM6 124 aa2.51□□□□□ -2.01
PUB1YNL016W QCR8P08525 94 aa2.5□□□□□ -2.01
PUB1YNL016W COX23P38824 151 aa2.5□□□□□ -2.01
PUB1YNL016W DAN1P47178 298 aa2.5□□□□□ -2.01
PUB1YNL016W SUS1Q6WNK7 96 aa2.5□□□□□ -2.01
PUB1YNL016W YJL197C-AP0C5P0 93 aa2.49□□□□□ -2.01
PUB1YNL016W MRPL38P35996 138 aaPredicted RBP2.49□□□□□ -2.01
PUB1YNL016W CYB5P40312 120 aa2.49□□□□□ -2.01
PUB1YNL016W CWP2P43497 92 aa2.49□□□□□ -2.01
PUB1YNL016W YGL014C-AP0C5N1 53 aa2.48□□□□□ -2.01
PUB1YNL016W YHR213WP0CI67 198 aa2.48□□□□□ -2.01
PUB1YNL016W HMRA2P0CY13 119 aa2.48□□□□□ -2.01
PUB1YNL016W COX12Q01519 83 aa2.48□□□□□ -2.01
PUB1YNL016W RGM1Q00453 211 aa2.47□□□□□ -2.01
PUB1YNL016W YDR042CQ03205 200 aa2.47□□□□□ -2.01
PUB1YNL016W YLR363W-AQ3E747 85 aa2.47□□□□□ -2.01
PUB1YNL016W GCV3P39726 170 aaPredicted RBP2.46□□□□□ -2.02
PUB1YNL016W YBR027CP38220 110 aa2.45□□□□□ -2.02
PUB1YNL016W AIM4P38305 123 aaPredicted RBP2.45□□□□□ -2.02
PUB1YNL016W YEL008WP40001 126 aa2.45□□□□□ -2.02
PUB1YNL016W LST8P41318 303 aa2.45□□□□□ -2.02
PUB1YNL016W PAU5P43575 122 aa2.45□□□□□ -2.02
PUB1YNL016W YPR108W-AQ3E7B3 70 aa2.45□□□□□ -2.02
PUB1YNL016W YDL012CQ12489 107 aa2.44□□□□□ -2.02
PUB1YNL016W YLR285C-AQ3E771 56 aa2.44□□□□□ -2.02
PUB1YNL016W RPL33AP05744 107 aaKnown RBP2.43□□□□□ -2.02
PUB1YNL016W PFY1P07274 126 aa2.43□□□□□ -2.02
PUB1YNL016W RPS22AP0C0W1 130 aaKnown RBP2.43□□□□□ -2.02
PUB1YNL016W LSM2P38203 95 aaKnown RBP2.43□□□□□ -2.02
PUB1YNL016W YHL005CP38752 130 aa2.43□□□□□ -2.02
PUB1YNL016W RSM18P40033 138 aa2.43□□□□□ -2.02
PUB1YNL016W POR2P40478 281 aa2.43□□□□□ -2.02
PUB1YNL016W YLR162WQ06235 118 aa2.43□□□□□ -2.02
PUB1YNL016W PRM7Q12459 698 aa2.43□□□□□ -2.02
PUB1YNL016W HUG1Q6Q5K6 68 aa2.43□□□□□ -2.02
PUB1YNL016W YMR122CQ03879 124 aa2.42□□□□□ -2.02
PUB1YNL016W COA3Q3E7B2 85 aa2.41□□□□□ -2.02
PUB1YNL016W ENV10Q99382 181 aa2.41□□□□□ -2.02
PUB1YNL016W YCR085WP25650 117 aa2.4□□□□□ -2.02
PUB1YNL016W YFL065CP43539 102 aa2.4□□□□□ -2.02
PUB1YNL016W ICY1Q04329 127 aa2.4□□□□□ -2.02
PUB1YNL016W LSM6Q06406 86 aaKnown RBP2.4□□□□□ -2.02
PUB1YNL016W YPR203WQ08994 102 aa2.4□□□□□ -2.02
PUB1YNL016W YBR219CP38317 127 aa2.39□□□□□ -2.03
PUB1YNL016W YIL163CP40448 117 aa2.39□□□□□ -2.03
PUB1YNL016W IMP2P46972 177 aa2.39□□□□□ -2.03
PUB1YNL016W SGF11Q03067 99 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms