RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C PAU15P40585 124 aa2.19□□□□□ -2.06
SSO2YMR183C SEN15Q04675 128 aa2.19□□□□□ -2.06
SSO2YMR183C PRM3Q08931 133 aa2.19□□□□□ -2.06
SSO2YMR183C ECM12O13529 151 aa2.18□□□□□ -2.06
SSO2YMR183C YHL005CP38752 130 aa2.18□□□□□ -2.06
SSO2YMR183C GCN1P33892 2672 aaKnown RBP2.18□□□□□ -2.06
SSO2YMR183C IRA1P18963 3092 aa2.17□□□□□ -2.06
SSO2YMR183C AIM4P38305 123 aaPredicted RBP2.17□□□□□ -2.06
SSO2YMR183C YLR363W-AQ3E747 85 aa2.17□□□□□ -2.06
SSO2YMR183C RRT15Q3E811 62 aa2.17□□□□□ -2.06
SSO2YMR183C UBR2Q07963 1872 aa2.17□□□□□ -2.06
SSO2YMR183C CUP1-1P0CX80 61 aa2.16□□□□□ -2.06
SSO2YMR183C CUP1-2P0CX81 61 aa2.16□□□□□ -2.06
SSO2YMR183C YMR321CQ04898 105 aa2.16□□□□□ -2.06
SSO2YMR183C COA4Q05809 96 aa2.16□□□□□ -2.06
SSO2YMR183C YDR524C-BQ3E6R4 66 aa2.16□□□□□ -2.06
SSO2YMR183C RIF1P29539 1916 aa2.15□□□□□ -2.06
SSO2YMR183C RPL22AP05749 121 aaKnown RBP2.15□□□□□ -2.07
SSO2YMR183C YIL163CP40448 117 aa2.15□□□□□ -2.07
SSO2YMR183C YDR042CQ03205 200 aa2.15□□□□□ -2.07
SSO2YMR183C SUS1Q6WNK7 96 aa2.15□□□□□ -2.07
SSO2YMR183C ECM29P38737 1868 aa2.15□□□□□ -2.07
SSO2YMR183C YFL065CP43539 102 aa2.14□□□□□ -2.07
SSO2YMR183C YCL048W-AQ2V2Q2 79 aa2.14□□□□□ -2.07
SSO2YMR183C YSF3P0C074 85 aaPredicted RBP2.13□□□□□ -2.07
SSO2YMR183C HMRA2P0CY13 119 aa2.13□□□□□ -2.07
SSO2YMR183C SRB6P32570 121 aa2.13□□□□□ -2.07
SSO2YMR183C CYB5P40312 120 aa2.13□□□□□ -2.07
SSO2YMR183C IRC21Q04772 201 aa2.13□□□□□ -2.07
SSO2YMR183C GCV3P39726 170 aaPredicted RBP2.12□□□□□ -2.07
SSO2YMR183C YLR285C-AQ3E771 56 aa2.12□□□□□ -2.07
SSO2YMR183C ROX3P25046 220 aa2.11□□□□□ -2.07
SSO2YMR183C RSM18P40033 138 aa2.11□□□□□ -2.07
SSO2YMR183C PAU5P43575 122 aa2.11□□□□□ -2.07
SSO2YMR183C LSM6Q06406 86 aaKnown RBP2.11□□□□□ -2.07
SSO2YMR183C MOT1P32333 1867 aa2.11□□□□□ -2.07
SSO2YMR183C YHL037CP38733 133 aa2.1□□□□□ -2.07
SSO2YMR183C ICS3P47034 131 aa2.1□□□□□ -2.07
SSO2YMR183C YPR203WQ08994 102 aa2.1□□□□□ -2.07
SSO2YMR183C MYO1P08964 1928 aa2.09□□□□□ -2.07
SSO2YMR183C ACC1Q00955 2233 aaKnown RBP2.09□□□□□ -2.07
SSO2YMR183C YHR212W-AP0CX91 67 aa2.09□□□□□ -2.07
SSO2YMR183C YJL009WP47078 108 aa2.09□□□□□ -2.07
SSO2YMR183C CCW12Q12127 133 aa2.09□□□□□ -2.07
SSO2YMR183C YGL041C-BQ3E750 60 aa2.09□□□□□ -2.07
SSO2YMR183C ENV10Q99382 181 aa2.09□□□□□ -2.07
SSO2YMR183C BEM2P39960 2167 aaKnown RBP2.09□□□□□ -2.08
SSO2YMR183C CSF1Q12150 2958 aa2.08□□□□□ -2.08
SSO2YMR183C RPS22AP0C0W1 130 aaKnown RBP2.08□□□□□ -2.08
SSO2YMR183C VPS55P47111 140 aa2.08□□□□□ -2.08
SSO2YMR183C ICY1Q04329 127 aa2.08□□□□□ -2.08
SSO2YMR183C YMR175W-AQ3E766 64 aa2.08□□□□□ -2.08
SSO2YMR183C IMP2P46972 177 aa2.07□□□□□ -2.08
SSO2YMR183C YNL122CP53921 115 aaPredicted RBP2.07□□□□□ -2.08
SSO2YMR183C YOL118CQ08259 102 aa2.07□□□□□ -2.08
SSO2YMR183C YCR095W-AQ3E787 52 aa2.07□□□□□ -2.08
SSO2YMR183C CCW14O13547 238 aa2.06□□□□□ -2.08
SSO2YMR183C YGR240C-AQ3E786 66 aa2.06□□□□□ -2.08
SSO2YMR183C YBR013CP38215 129 aa2.05□□□□□ -2.08
SSO2YMR183C PRP8P33334 2413 aaKnown RBP2.05□□□□□ -2.08
SSO2YMR183C YCR085WP25650 117 aa2.04□□□□□ -2.08
SSO2YMR183C RPA12P32529 125 aaKnown RBP2.04□□□□□ -2.08
SSO2YMR183C UTP20P35194 2493 aaKnown RBP2.04□□□□□ -2.08
SSO2YMR183C CWP2P43497 92 aa2.04□□□□□ -2.08
SSO2YMR183C MIC27P50945 234 aa2.04□□□□□ -2.08
SSO2YMR183C MRPS12P53732 153 aa2.04□□□□□ -2.08
SSO2YMR183C TRA1P38811 3744 aa2.04□□□□□ -2.08
SSO2YMR183C CDC39P25655 2108 aaKnown RBP2.03□□□□□ -2.08
SSO2YMR183C AQY2P0CD90 149 aa2.03□□□□□ -2.08
SSO2YMR183C YAR064WP39563 99 aa2.03□□□□□ -2.08
SSO2YMR183C YDR210WQ03482 75 aa2.03□□□□□ -2.08
SSO2YMR183C LCL2Q08045 131 aa2.03□□□□□ -2.08
SSO2YMR183C POC4Q12245 148 aaPredicted RBP2.03□□□□□ -2.08
SSO2YMR183C MHF2Q3E829 80 aa2.03□□□□□ -2.08
SSO2YMR183C SNA2P56508 79 aa2.02□□□□□ -2.09
SSO2YMR183C YOR072WQ08486 104 aa2.02□□□□□ -2.09
SSO2YMR183C MRPL38P35996 138 aaPredicted RBP2.01□□□□□ -2.09
SSO2YMR183C RPS22BQ3E7Y3 130 aaKnown RBP2.01□□□□□ -2.09
SSO2YMR183C MEC1P38111 2368 aa2□□□□□ -2.09
SSO2YMR183C MRPL31P14063 131 aaPredicted RBP1.99□□□□□ -2.09
SSO2YMR183C YBL071CP38185 102 aa1.99□□□□□ -2.09
SSO2YMR183C YPL038W-AQ3E7B4 63 aa1.99□□□□□ -2.09
SSO2YMR183C YCR001WP25347 104 aa1.98□□□□□ -2.09
SSO2YMR183C MRP17P28778 131 aa1.98□□□□□ -2.09
SSO2YMR183C SPC1P46965 94 aa1.98□□□□□ -2.09
SSO2YMR183C MRX7P53869 86 aa1.98□□□□□ -2.09
SSO2YMR183C YOL013W-AP0C272 63 aaPredicted RBP1.97□□□□□ -2.09
SSO2YMR183C PAU6P0CE90 120 aa1.97□□□□□ -2.09
SSO2YMR183C PAU18P0CE91 120 aa1.97□□□□□ -2.09
SSO2YMR183C NHP2P32495 156 aaPredicted RBP1.97□□□□□ -2.09
SSO2YMR183C COX12Q01519 83 aa1.97□□□□□ -2.09
SSO2YMR183C MGR2Q02889 113 aa1.97□□□□□ -2.09
SSO2YMR183C TOM6P33448 61 aa1.96□□□□□ -2.1
SSO2YMR183C YOR343CQ12484 108 aa1.96□□□□□ -2.1
SSO2YMR183C YHR213W-AQ8TGT4 77 aa1.96□□□□□ -2.1
SSO2YMR183C LAA1P39526 2014 aa1.96□□□□□ -2.1
SSO2YMR183C AIM19P40502 157 aa1.95□□□□□ -2.1
SSO2YMR183C BRR2P32639 2163 aaKnown RBP1.94□□□□□ -2.1
SSO2YMR183C YIL102CP40488 101 aa1.94□□□□□ -2.1
SSO2YMR183C CYR1P08678 2026 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms