RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W SPC1P46965 94 aa0.72□□□□□ -2.29
CTK3YML112W YMR321CQ04898 105 aa0.72□□□□□ -2.29
CTK3YML112W CCW12Q12127 133 aa0.72□□□□□ -2.29
CTK3YML112W YDR246W-AQ3E763 66 aa0.72□□□□□ -2.29
CTK3YML112W YPL038W-AQ3E7B4 63 aa0.72□□□□□ -2.29
CTK3YML112W YCF1P39109 1515 aaKnown RBP0.72□□□□□ -2.29
CTK3YML112W IQG1Q12280 1495 aa0.72□□□□□ -2.29
CTK3YML112W SMC4Q12267 1418 aa0.72□□□□□ -2.29
CTK3YML112W RIF1P29539 1916 aa0.72□□□□□ -2.29
CTK3YML112W SSK2P53599 1579 aa0.71□□□□□ -2.3
CTK3YML112W IRC20Q06554 1556 aa0.71□□□□□ -2.3
CTK3YML112W YAL065CO13511 128 aa0.71□□□□□ -2.3
CTK3YML112W RPL33AP05744 107 aaKnown RBP0.71□□□□□ -2.3
CTK3YML112W PFY1P07274 126 aa0.71□□□□□ -2.3
CTK3YML112W YSF3P0C074 85 aaPredicted RBP0.71□□□□□ -2.3
CTK3YML112W YHR212W-AP0CX91 67 aa0.71□□□□□ -2.3
CTK3YML112W MRP17P28778 131 aa0.71□□□□□ -2.3
CTK3YML112W YBL071CP38185 102 aa0.71□□□□□ -2.3
CTK3YML112W VPS55P47111 140 aa0.71□□□□□ -2.3
CTK3YML112W MRX7P53869 86 aa0.71□□□□□ -2.3
CTK3YML112W LSM6Q06406 86 aaKnown RBP0.71□□□□□ -2.3
CTK3YML112W HPA2Q06592 156 aa0.71□□□□□ -2.3
CTK3YML112W LCL2Q08045 131 aa0.71□□□□□ -2.3
CTK3YML112W YOR343CQ12484 108 aa0.71□□□□□ -2.3
CTK3YML112W YIL156W-BQ2V2P4 73 aa0.71□□□□□ -2.3
CTK3YML112W YCL048W-AQ2V2Q2 79 aa0.71□□□□□ -2.3
CTK3YML112W YCR095W-AQ3E787 52 aa0.71□□□□□ -2.3
CTK3YML112W YIL134C-AQ45U18 67 aa0.71□□□□□ -2.3
CTK3YML112W VPS15P22219 1454 aa0.71□□□□□ -2.3
CTK3YML112W PMD1P32634 1753 aa0.7□□□□□ -2.3
CTK3YML112W FKS3Q04952 1785 aa0.7□□□□□ -2.3
CTK3YML112W RRP5Q05022 1729 aaKnown RBP0.7□□□□□ -2.3
CTK3YML112W SPT6P23615 1451 aaKnown RBP0.7□□□□□ -2.3
CTK3YML112W MYO4P32492 1471 aa0.7□□□□□ -2.3
CTK3YML112W YDL022C-AP0C5L6 82 aa0.7□□□□□ -2.3
CTK3YML112W AQY2P0CD90 149 aa0.7□□□□□ -2.3
CTK3YML112W PAU8P0CE92 120 aa0.7□□□□□ -2.3
CTK3YML112W PAU11P0CE93 120 aa0.7□□□□□ -2.3
CTK3YML112W RPS11AP0CX47 156 aaKnown RBP0.7□□□□□ -2.3
CTK3YML112W RPS11BP0CX48 156 aaKnown RBP0.7□□□□□ -2.3
CTK3YML112W PAU13P38725 120 aa0.7□□□□□ -2.3
CTK3YML112W PAU4P53427 120 aa0.7□□□□□ -2.3
CTK3YML112W PAU10Q03050 120 aa0.7□□□□□ -2.3
CTK3YML112W IRC21Q04772 201 aa0.7□□□□□ -2.3
CTK3YML112W PAU23Q07987 124 aa0.7□□□□□ -2.3
CTK3YML112W PAU17Q12370 124 aa0.7□□□□□ -2.3
CTK3YML112W YOR314WQ12506 109 aa0.7□□□□□ -2.3
CTK3YML112W PAU9Q3E770 120 aa0.7□□□□□ -2.3
CTK3YML112W COA3Q3E7B2 85 aa0.7□□□□□ -2.3
CTK3YML112W YFL041W-AQ3E817 63 aa0.7□□□□□ -2.3
CTK3YML112W YNR034W-AQ3E841 98 aa0.7□□□□□ -2.3
CTK3YML112W YGR035W-AQ45U48 73 aa0.7□□□□□ -2.3
CTK3YML112W CDC25P04821 1589 aa0.7□□□□□ -2.3
CTK3YML112W TY3B-GQ99315 1547 aa0.69□□□□□ -2.3
CTK3YML112W PAU1P0CE88 120 aa0.69□□□□□ -2.3
CTK3YML112W PAU14P0CE89 120 aa0.69□□□□□ -2.3
CTK3YML112W MRPL31P14063 131 aaPredicted RBP0.69□□□□□ -2.3
CTK3YML112W ATX1P38636 73 aa0.69□□□□□ -2.3
CTK3YML112W MPC2P38857 129 aa0.69□□□□□ -2.3
CTK3YML112W YHR173CP38864 112 aa0.69□□□□□ -2.3
CTK3YML112W COX12Q01519 83 aa0.69□□□□□ -2.3
CTK3YML112W COX19Q3E731 98 aa0.69□□□□□ -2.3
CTK3YML112W LAA1P39526 2014 aa0.69□□□□□ -2.3
CTK3YML112W SNQ2P32568 1501 aaKnown RBP0.69□□□□□ -2.3
CTK3YML112W NTE1Q04958 1679 aa0.69□□□□□ -2.3
CTK3YML112W BCK1Q01389 1478 aa0.68□□□□□ -2.3
CTK3YML112W ULS1Q08562 1619 aa0.68□□□□□ -2.3
CTK3YML112W ERI1P62651 68 aaKnown RBP0.68□□□□□ -2.3
CTK3YML112W MLP1Q02455 1875 aaKnown RBP0.68□□□□□ -2.3
CTK3YML112W PAU20Q08322 120 aa0.68□□□□□ -2.3
CTK3YML112W YOR105WQ08504 108 aa0.68□□□□□ -2.3
CTK3YML112W VMA9Q3E7B6 73 aa0.68□□□□□ -2.3
CTK3YML112W NOP10Q6Q547 58 aaPredicted RBP0.68□□□□□ -2.3
CTK3YML112W TY4B-HP0C2J7 1802 aa0.68□□□□□ -2.3
CTK3YML112W VTH1P40438 1549 aa0.68□□□□□ -2.3
CTK3YML112W VTH2P40890 1549 aa0.68□□□□□ -2.3
CTK3YML112W ARO1P08566 1588 aaKnown RBP0.67□□□□□ -2.3
CTK3YML112W MMS1Q06211 1407 aa0.67□□□□□ -2.3
CTK3YML112W LCL1Q02786 101 aa0.67□□□□□ -2.3
CTK3YML112W MGR2Q02889 113 aa0.67□□□□□ -2.3
CTK3YML112W YDR010CQ12426 110 aa0.67□□□□□ -2.3
CTK3YML112W YIL102C-AQ2V2P5 75 aa0.67□□□□□ -2.3
CTK3YML112W MHF2Q3E829 80 aa0.67□□□□□ -2.3
CTK3YML112W PDR5P33302 1511 aaKnown RBP0.67□□□□□ -2.3
CTK3YML112W APC1P53886 1748 aa0.67□□□□□ -2.3
CTK3YML112W PEP1P32319 1579 aa0.66□□□□□ -2.3
CTK3YML112W TY4B-JP47024 1803 aa0.66□□□□□ -2.3
CTK3YML112W QCR9P22289 66 aa0.66□□□□□ -2.3
CTK3YML112W SPI1P40092 148 aa0.66□□□□□ -2.3
CTK3YML112W BSC4P53841 131 aa0.66□□□□□ -2.3
CTK3YML112W YNL122CP53921 115 aaPredicted RBP0.66□□□□□ -2.3
CTK3YML112W SNA2P56508 79 aa0.66□□□□□ -2.3
CTK3YML112W YKL065W-AQ2V2P2 73 aa0.66□□□□□ -2.3
CTK3YML112W YGR240C-AQ3E786 66 aa0.66□□□□□ -2.3
CTK3YML112W YOR032W-AQ8TGS1 66 aa0.66□□□□□ -2.3
CTK3YML112W STT4P37297 1900 aa0.66□□□□□ -2.3
CTK3YML112W DNF3Q12674 1656 aa0.65□□□□□ -2.3
CTK3YML112W YRF1-1P0CX20 1796 aa0.65□□□□□ -2.3
CTK3YML112W YRF1-5P0CX21 1796 aa0.65□□□□□ -2.3
CTK3YML112W YRF1-8P0CX22 1796 aa0.65□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 190.6 ms