RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C SEC7P11075 2009 aaKnown RBP1.1□□□□□ -2.23
VPS9YML097C AUA1P32450 94 aa1.1□□□□□ -2.23
VPS9YML097C GCV3P39726 170 aaPredicted RBP1.1□□□□□ -2.23
VPS9YML097C EMC5P40540 141 aa1.1□□□□□ -2.23
VPS9YML097C SIN3P22579 1536 aa1.1□□□□□ -2.23
VPS9YML097C ESP1Q03018 1630 aa1.1□□□□□ -2.23
VPS9YML097C MMS1Q06211 1407 aa1.1□□□□□ -2.23
VPS9YML097C SHU1P38751 150 aa1.09□□□□□ -2.23
VPS9YML097C MSL1P40567 111 aaPredicted RBP1.09□□□□□ -2.23
VPS9YML097C PDR15Q04182 1529 aaKnown RBP1.09□□□□□ -2.23
VPS9YML097C SSN2P38931 1420 aa1.09□□□□□ -2.24
VPS9YML097C MRPL38P35996 138 aaPredicted RBP1.08□□□□□ -2.24
VPS9YML097C YCR075W-AQ3E830 75 aa1.08□□□□□ -2.24
VPS9YML097C XRN1P22147 1528 aaKnown RBP1.08□□□□□ -2.24
VPS9YML097C MPC2P38857 129 aa1.08□□□□□ -2.24
VPS9YML097C MRX7P53869 86 aa1.08□□□□□ -2.24
VPS9YML097C SNA2P56508 79 aa1.08□□□□□ -2.24
VPS9YML097C YCL001W-BQ96VH2 84 aa1.08□□□□□ -2.24
VPS9YML097C TOM1Q03280 3268 aa1.07□□□□□ -2.24
VPS9YML097C RPO21P04050 1733 aaKnown RBP1.07□□□□□ -2.24
VPS9YML097C PAU6P0CE90 120 aa1.07□□□□□ -2.24
VPS9YML097C PAU18P0CE91 120 aa1.07□□□□□ -2.24
VPS9YML097C YBL071CP38185 102 aa1.07□□□□□ -2.24
VPS9YML097C YDR042CQ03205 200 aa1.07□□□□□ -2.24
VPS9YML097C RKR1Q04781 1562 aa1.07□□□□□ -2.24
VPS9YML097C URA2P07259 2214 aaKnown RBP1.06□□□□□ -2.24
VPS9YML097C MRP17P28778 131 aa1.06□□□□□ -2.24
VPS9YML097C YDR029WQ12111 104 aa1.06□□□□□ -2.24
VPS9YML097C USO1P25386 1790 aa1.05□□□□□ -2.24
VPS9YML097C RSM18P40033 138 aa1.05□□□□□ -2.24
VPS9YML097C YMR082CQ04276 118 aa1.05□□□□□ -2.24
VPS9YML097C YBR072C-AQ3E794 53 aa1.05□□□□□ -2.24
VPS9YML097C YNR034W-AQ3E841 98 aa1.05□□□□□ -2.24
VPS9YML097C SPO14P36126 1683 aa1.04□□□□□ -2.24
VPS9YML097C DOP1Q03921 1698 aa1.04□□□□□ -2.24
VPS9YML097C SCC2Q04002 1493 aa1.04□□□□□ -2.24
VPS9YML097C RPS11AP0CX47 156 aaKnown RBP1.04□□□□□ -2.24
VPS9YML097C RPS11BP0CX48 156 aaKnown RBP1.04□□□□□ -2.24
VPS9YML097C YBR292CP38357 123 aa1.04□□□□□ -2.24
VPS9YML097C AIM19P40502 157 aa1.04□□□□□ -2.24
VPS9YML097C ICY1Q04329 127 aa1.04□□□□□ -2.24
VPS9YML097C YDR010CQ12426 110 aa1.04□□□□□ -2.24
VPS9YML097C TY4B-HP0C2J7 1802 aa1.04□□□□□ -2.24
VPS9YML097C NHP10Q03435 203 aa1.03□□□□□ -2.24
VPS9YML097C UFD4P33202 1483 aa1.03□□□□□ -2.25
VPS9YML097C SUS1Q6WNK7 96 aa1.02□□□□□ -2.25
VPS9YML097C POL1P13382 1468 aa1.02□□□□□ -2.25
VPS9YML097C CHC1P22137 1653 aaKnown RBP1.02□□□□□ -2.25
VPS9YML097C GDB1Q06625 1536 aa1.02□□□□□ -2.25
VPS9YML097C SKI3P17883 1432 aaKnown RBP1.01□□□□□ -2.25
VPS9YML097C YHR173CP38864 112 aa1.01□□□□□ -2.25
VPS9YML097C SPC1P46965 94 aa1.01□□□□□ -2.25
VPS9YML097C MLP2P40457 1679 aa1.01□□□□□ -2.25
VPS9YML097C DNF3Q12674 1656 aa1.01□□□□□ -2.25
VPS9YML097C VPS13Q07878 3144 aa1.01□□□□□ -2.25
VPS9YML097C BRR2P32639 2163 aaKnown RBP1□□□□□ -2.25
VPS9YML097C ULS1Q08562 1619 aa1□□□□□ -2.25
VPS9YML097C VPS15P22219 1454 aa0.99□□□□□ -2.25
VPS9YML097C NUM1Q00402 2748 aa0.99□□□□□ -2.25
VPS9YML097C MYO1P08964 1928 aa0.99□□□□□ -2.25
VPS9YML097C YSP2Q06681 1438 aa0.99□□□□□ -2.25
VPS9YML097C NUP170P38181 1502 aa0.98□□□□□ -2.25
VPS9YML097C ARO1P08566 1588 aaKnown RBP0.98□□□□□ -2.25
VPS9YML097C SNU13P39990 126 aaKnown RBP0.98□□□□□ -2.25
VPS9YML097C PAU20Q08322 120 aa0.98□□□□□ -2.25
VPS9YML097C NUP159P40477 1460 aa0.98□□□□□ -2.25
VPS9YML097C MMS22Q06164 1454 aa0.98□□□□□ -2.25
VPS9YML097C VTH1P40438 1549 aa0.98□□□□□ -2.25
VPS9YML097C VTH2P40890 1549 aa0.98□□□□□ -2.25
VPS9YML097C ECM12O13529 151 aa0.97□□□□□ -2.25
VPS9YML097C PDR12Q02785 1511 aa0.97□□□□□ -2.25
VPS9YML097C POL2P21951 2222 aaKnown RBP0.97□□□□□ -2.25
VPS9YML097C YBT1P32386 1661 aa0.97□□□□□ -2.25
VPS9YML097C YRF1-2P40105 1681 aa0.97□□□□□ -2.25
VPS9YML097C PAU1P0CE88 120 aa0.96□□□□□ -2.26
VPS9YML097C PAU14P0CE89 120 aa0.96□□□□□ -2.26
VPS9YML097C PAU8P0CE92 120 aa0.96□□□□□ -2.26
VPS9YML097C PAU11P0CE93 120 aa0.96□□□□□ -2.26
VPS9YML097C PAU13P38725 120 aa0.96□□□□□ -2.26
VPS9YML097C PAU10Q03050 120 aa0.96□□□□□ -2.26
VPS9YML097C YMR175W-AQ3E766 64 aa0.96□□□□□ -2.26
VPS9YML097C PAU9Q3E770 120 aa0.96□□□□□ -2.26
VPS9YML097C SNQ2P32568 1501 aaKnown RBP0.96□□□□□ -2.26
VPS9YML097C NUP188P52593 1655 aaKnown RBP0.96□□□□□ -2.26
VPS9YML097C TY1B-NL2Q99337 1749 aaKnown RBP0.96□□□□□ -2.26
VPS9YML097C YGL194C-AQ2V2P6 80 aa0.96□□□□□ -2.26
VPS9YML097C SMC4Q12267 1418 aa0.95□□□□□ -2.26
VPS9YML097C TY3B-GQ99315 1547 aa0.95□□□□□ -2.26
VPS9YML097C BUD3P25558 1636 aa0.95□□□□□ -2.26
VPS9YML097C TOR1P35169 2470 aa0.95□□□□□ -2.26
VPS9YML097C MYO4P32492 1471 aa0.95□□□□□ -2.26
VPS9YML097C TAO3P40468 2376 aa0.95□□□□□ -2.26
VPS9YML097C PAU4P53427 120 aa0.95□□□□□ -2.26
VPS9YML097C FKS3Q04952 1785 aa0.95□□□□□ -2.26
VPS9YML097C YPR117WQ06116 2489 aa0.95□□□□□ -2.26
VPS9YML097C SNF2P22082 1703 aa0.93□□□□□ -2.26
VPS9YML097C GCN2P15442 1659 aa0.93□□□□□ -2.26
VPS9YML097C IML1P47170 1584 aa0.93□□□□□ -2.26
VPS9YML097C HAP1P0CE41 1502 aa0.93□□□□□ -2.26
VPS9YML097C STU1P38198 1513 aa0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms