RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YRF1-5P0CX21 1796 aa0.76□□□□□ -2.29
ATG38YLR211C YRF1-8P0CX22 1796 aa0.76□□□□□ -2.29
ATG38YLR211C YCR085WP25650 117 aa0.76□□□□□ -2.29
ATG38YLR211C RPA12P32529 125 aaKnown RBP0.76□□□□□ -2.29
ATG38YLR211C MHF2Q3E829 80 aa0.76□□□□□ -2.29
ATG38YLR211C BSC4P53841 131 aa0.75□□□□□ -2.29
ATG38YLR211C YBR072C-AQ3E794 53 aa0.75□□□□□ -2.29
ATG38YLR211C TY4B-HP0C2J7 1802 aa0.75□□□□□ -2.29
ATG38YLR211C YHR173CP38864 112 aa0.74□□□□□ -2.29
ATG38YLR211C YOR343CQ12484 108 aa0.74□□□□□ -2.29
ATG38YLR211C YDR010CQ12426 110 aa0.73□□□□□ -2.29
ATG38YLR211C YNL042W-BQ3E7Z2 85 aa0.72□□□□□ -2.29
ATG38YLR211C YHR214C-DP0CX93 97 aa0.71□□□□□ -2.3
ATG38YLR211C YPR145C-AQ2V2P0 78 aa0.71□□□□□ -2.3
ATG38YLR211C PRP8P33334 2413 aaKnown RBP0.71□□□□□ -2.3
ATG38YLR211C TOM6P33448 61 aa0.7□□□□□ -2.3
ATG38YLR211C PAU23Q07987 124 aa0.7□□□□□ -2.3
ATG38YLR211C PAU17Q12370 124 aa0.7□□□□□ -2.3
ATG38YLR211C YBR201C-AQ2V2Q3 67 aa0.7□□□□□ -2.3
ATG38YLR211C YMR122W-AQ3E842 84 aa0.7□□□□□ -2.3
ATG38YLR211C DNF3Q12674 1656 aa0.69□□□□□ -2.3
ATG38YLR211C ESP1Q03018 1630 aa0.69□□□□□ -2.3
ATG38YLR211C YAL065CO13511 128 aa0.69□□□□□ -2.3
ATG38YLR211C PDX3P38075 228 aaKnown RBP0.69□□□□□ -2.3
ATG38YLR211C YNL190WP53872 204 aa0.69□□□□□ -2.3
ATG38YLR211C YIL156W-BQ2V2P4 73 aa0.69□□□□□ -2.3
ATG38YLR211C NOP10Q6Q547 58 aaPredicted RBP0.69□□□□□ -2.3
ATG38YLR211C Q0032Q9ZZX7 96 aa0.69□□□□□ -2.3
ATG38YLR211C XRN1P22147 1528 aaKnown RBP0.69□□□□□ -2.3
ATG38YLR211C FPR2P32472 135 aa0.68□□□□□ -2.3
ATG38YLR211C RPC10P40422 70 aa0.68□□□□□ -2.3
ATG38YLR211C YDR119W-AQ2V2P9 66 aa0.68□□□□□ -2.3
ATG38YLR211C YDR381C-AQ3E6R5 114 aa0.68□□□□□ -2.3
ATG38YLR211C YRF1-2P40105 1681 aa0.68□□□□□ -2.3
ATG38YLR211C BLM10P43583 2143 aa0.67□□□□□ -2.3
ATG38YLR211C COX7P10174 60 aa0.67□□□□□ -2.3
ATG38YLR211C YOR314WQ12506 109 aa0.67□□□□□ -2.3
ATG38YLR211C YOL164W-AQ3E7A5 60 aa0.67□□□□□ -2.3
ATG38YLR211C MMS22Q06164 1454 aa0.67□□□□□ -2.3
ATG38YLR211C TY1B-PR2P0C2J0 1756 aa0.66□□□□□ -2.3
ATG38YLR211C TY1B-BLQ12490 1755 aa0.66□□□□□ -2.3
ATG38YLR211C YKL065W-AQ2V2P2 73 aa0.66□□□□□ -2.3
ATG38YLR211C SNF2P22082 1703 aa0.66□□□□□ -2.3
ATG38YLR211C RIM15P43565 1770 aa0.65□□□□□ -2.3
ATG38YLR211C YOR105WQ08504 108 aa0.65□□□□□ -2.31
ATG38YLR211C YHR213W-AQ8TGT4 77 aa0.65□□□□□ -2.31
ATG38YLR211C TY1B-BRQ12193 1756 aa0.65□□□□□ -2.31
ATG38YLR211C SWM2P40342 146 aa0.64□□□□□ -2.31
ATG38YLR211C RPL38P49167 78 aaKnown RBP0.64□□□□□ -2.31
ATG38YLR211C YGR121W-AQ3E816 71 aa0.64□□□□□ -2.31
ATG38YLR211C ECM29P38737 1868 aa0.63□□□□□ -2.31
ATG38YLR211C YDL022C-AP0C5L6 82 aa0.63□□□□□ -2.31
ATG38YLR211C YNL198CP40166 100 aa0.63□□□□□ -2.31
ATG38YLR211C ATP18P81450 59 aa0.63□□□□□ -2.31
ATG38YLR211C MLP1Q02455 1875 aaKnown RBP0.62□□□□□ -2.31
ATG38YLR211C UTP10P42945 1769 aaKnown RBP0.62□□□□□ -2.31
ATG38YLR211C BPH1P25356 2167 aa0.62□□□□□ -2.31
ATG38YLR211C NUP159P40477 1460 aa0.61□□□□□ -2.31
ATG38YLR211C YJR107C-AP0CT86 78 aa0.61□□□□□ -2.31
ATG38YLR211C YGR035W-AQ45U48 73 aa0.61□□□□□ -2.31
ATG38YLR211C TY1B-NL2Q99337 1749 aaKnown RBP0.61□□□□□ -2.31
ATG38YLR211C STT4P37297 1900 aa0.6□□□□□ -2.31
ATG38YLR211C QCR9P22289 66 aa0.6□□□□□ -2.31
ATG38YLR211C LSM2P38203 95 aaKnown RBP0.6□□□□□ -2.31
ATG38YLR211C YBR016WP38216 128 aa0.6□□□□□ -2.31
ATG38YLR211C TIM12P32830 109 aa0.59□□□□□ -2.31
ATG38YLR211C RPS29BP41058 56 aaKnown RBP0.59□□□□□ -2.31
ATG38YLR211C SDH6Q3E785 79 aa0.59□□□□□ -2.31
ATG38YLR211C YOL097W-AQ3E7Y9 61 aa0.59□□□□□ -2.31
ATG38YLR211C TY1B-DR6P0C2I3 1755 aa0.59□□□□□ -2.32
ATG38YLR211C TY1B-LR2P0C2I5 1755 aa0.59□□□□□ -2.32
ATG38YLR211C TY1B-LR3P0C2I6 1755 aaKnown RBP0.59□□□□□ -2.32
ATG38YLR211C TY1B-PR3P0C2J1 1755 aaKnown RBP0.59□□□□□ -2.32
ATG38YLR211C TY1B-JR2P47100 1755 aaKnown RBP0.59□□□□□ -2.32
ATG38YLR211C TY1B-MR1Q04214 1755 aa0.59□□□□□ -2.32
ATG38YLR211C TY1B-MR2Q04670 1755 aaKnown RBP0.59□□□□□ -2.32
ATG38YLR211C TY1B-NL1Q12112 1755 aa0.59□□□□□ -2.32
ATG38YLR211C TY1B-GR1Q12141 1755 aa0.59□□□□□ -2.32
ATG38YLR211C TY1B-GR3Q12316 1755 aa0.59□□□□□ -2.32
ATG38YLR211C TY1B-PLQ12414 1755 aaKnown RBP0.59□□□□□ -2.32
ATG38YLR211C TY1B-ORQ92393 1755 aa0.59□□□□□ -2.32
ATG38YLR211C SIN3P22579 1536 aa0.59□□□□□ -2.32
ATG38YLR211C MOT1P32333 1867 aa0.58□□□□□ -2.32
ATG38YLR211C TY1B-DR5P0C2I2 1755 aa0.58□□□□□ -2.32
ATG38YLR211C TY1B-PR1P0C2I9 1755 aaKnown RBP0.58□□□□□ -2.32
ATG38YLR211C TY1B-ER2Q03619 1755 aa0.58□□□□□ -2.32
ATG38YLR211C TY1B-DR1Q03855 1755 aa0.58□□□□□ -2.32
ATG38YLR211C TY1B-ML1Q04711 1755 aaKnown RBP0.58□□□□□ -2.32
ATG38YLR211C TY1B-LR1Q12088 1755 aaKnown RBP0.58□□□□□ -2.32
ATG38YLR211C TY1B-GR2Q12269 1755 aa0.58□□□□□ -2.32
ATG38YLR211C TY1B-DR3Q99231 1755 aa0.58□□□□□ -2.32
ATG38YLR211C SGF11Q03067 99 aa0.58□□□□□ -2.32
ATG38YLR211C TY2B-CP25384 1770 aa0.57□□□□□ -2.32
ATG38YLR211C TY2B-DR1Q12472 1770 aa0.57□□□□□ -2.32
ATG38YLR211C YPR108W-AQ3E7B3 70 aa0.57□□□□□ -2.32
ATG38YLR211C FAS2P19097 1887 aaKnown RBP0.56□□□□□ -2.32
ATG38YLR211C DOP1Q03921 1698 aa0.56□□□□□ -2.32
ATG38YLR211C UFD4P33202 1483 aa0.55□□□□□ -2.32
ATG38YLR211C PAI3P01094 68 aa0.55□□□□□ -2.32
ATG38YLR211C YFR009W-AP0C5M9 85 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms