RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLF1YLR117C RSM18P40033 138 aa3.67□□□□□ -1.82
CLF1YLR117C EDC1P53080 175 aaPredicted RBP3.67□□□□□ -1.82
CLF1YLR117C YDR274CP87283 123 aa3.67□□□□□ -1.82
CLF1YLR117C SRL1Q08673 210 aa3.67□□□□□ -1.82
CLF1YLR117C RPL15AP05748 204 aaKnown RBP3.66□□□□□ -1.82
CLF1YLR117C YKR045CP36138 183 aa3.66□□□□□ -1.82
CLF1YLR117C YDR114CQ04597 100 aa3.66□□□□□ -1.82
CLF1YLR117C YLR162WQ06235 118 aa3.66□□□□□ -1.82
CLF1YLR117C YOR314WQ12506 109 aa3.66□□□□□ -1.82
CLF1YLR117C YOR381W-AQ3E804 55 aa3.66□□□□□ -1.82
CLF1YLR117C YGR121W-AQ3E816 71 aa3.66□□□□□ -1.82
CLF1YLR117C RPL26AP05743 127 aaKnown RBP3.66□□□□□ -1.82
CLF1YLR117C ARC15P40518 154 aaRIP-Chip data3.66□□□□□ -1.82not detected
CLF1YLR117C YJR146WP47174 117 aa3.66□□□□□ -1.82
CLF1YLR117C YPR117WQ06116 2489 aa3.66□□□□□ -1.82
CLF1YLR117C YOR376W-AQ3E805 51 aa3.66□□□□□ -1.82
CLF1YLR117C HHF1P02309 103 aaKnown RBP3.65□□□□□ -1.83
CLF1YLR117C RPB9P27999 122 aa3.65□□□□□ -1.83
CLF1YLR117C RRT1P38192 103 aa3.65□□□□□ -1.83
CLF1YLR117C REE1P40893 198 aa3.65□□□□□ -1.83
CLF1YLR117C YJL027CP47063 138 aaPredicted RBP3.65□□□□□ -1.83
CLF1YLR117C YFL015CP43578 164 aa3.64□□□□□ -1.83
CLF1YLR117C RGM1Q00453 211 aa3.64□□□□□ -1.83
CLF1YLR117C SPG4Q04438 115 aa3.64□□□□□ -1.83
CLF1YLR117C YOR034C-AQ3E735 80 aa3.64□□□□□ -1.83
CLF1YLR117C DIF1O13577 133 aa3.64□□□□□ -1.83
CLF1YLR117C YJR107C-AP0CT86 78 aa3.64□□□□□ -1.83
CLF1YLR117C YFR035CP43608 114 aa3.64□□□□□ -1.83
CLF1YLR117C YGL034CP53186 121 aa3.64□□□□□ -1.83
CLF1YLR117C RPL26BP53221 127 aaKnown RBP3.64□□□□□ -1.83
CLF1YLR117C YBR126W-AQ8TGU7 68 aa3.64□□□□□ -1.83
CLF1YLR117C SEC16P48415 2195 aaKnown RBP3.63□□□□□ -1.83
CLF1YLR117C QCR8P08525 94 aa3.63□□□□□ -1.83
CLF1YLR117C YBR144CP34215 104 aa3.63□□□□□ -1.83
CLF1YLR117C SPO24Q3E752 67 aa3.63□□□□□ -1.83
CLF1YLR117C YDR182W-AQ3E796 67 aa3.63□□□□□ -1.83
CLF1YLR117C NOP10Q6Q547 58 aaPredicted RBP3.63□□□□□ -1.83
CLF1YLR117C GLT1Q12680 2145 aaKnown RBP3.62□□□□□ -1.83
CLF1YLR117C BEM2P39960 2167 aaKnown RBP3.62□□□□□ -1.83
CLF1YLR117C YLR236CA0A023PZG4 107 aa3.62□□□□□ -1.83
CLF1YLR117C RPL36BO14455 100 aaKnown RBP3.61□□□□□ -1.83
CLF1YLR117C RPL36AP05745 100 aaPredicted RBP3.61□□□□□ -1.83
CLF1YLR117C MPC3P53311 146 aa3.61□□□□□ -1.83
CLF1YLR117C YOL160WQ08321 113 aa3.61□□□□□ -1.83
CLF1YLR117C ACC1Q00955 2233 aaKnown RBP3.61□□□□□ -1.83
CLF1YLR117C CRC1Q12289 327 aa3.61□□□□□ -1.83
CLF1YLR117C YGR035W-AQ45U48 73 aa3.61□□□□□ -1.83
CLF1YLR117C YEL045CP32616 141 aa3.6□□□□□ -1.83
CLF1YLR117C YKL065W-AQ2V2P2 73 aa3.6□□□□□ -1.83
CLF1YLR117C YHL005CP38752 130 aa3.59□□□□□ -1.83
CLF1YLR117C YIL086CP40503 102 aa3.59□□□□□ -1.83
CLF1YLR117C ATP18P81450 59 aa3.59□□□□□ -1.83
CLF1YLR117C YOL166W-AQ8TGJ1 51 aa3.59□□□□□ -1.83
CLF1YLR117C YML100W-AQ8TGT0 57 aa3.59□□□□□ -1.83
CLF1YLR117C TDA2P40045 126 aa3.59□□□□□ -1.83
CLF1YLR117C YER084WP40057 128 aa3.59□□□□□ -1.83
CLF1YLR117C TOS8P53147 276 aa3.59□□□□□ -1.83
CLF1YLR117C YMR122CQ03879 124 aa3.59□□□□□ -1.83
CLF1YLR117C YER188C-AP0C0V2 99 aa3.58□□□□□ -1.84
CLF1YLR117C SED1Q01589 338 aa3.58□□□□□ -1.84
CLF1YLR117C YOR020W-AQ3E824 90 aa3.58□□□□□ -1.84
CLF1YLR117C BRR2P32639 2163 aaKnown RBP3.58□□□□□ -1.84
CLF1YLR117C YEL008WP40001 126 aa3.58□□□□□ -1.84
CLF1YLR117C RPL38P49167 78 aaKnown RBP3.58□□□□□ -1.84
CLF1YLR117C YBR200W-AQ3E755 54 aa3.58□□□□□ -1.84
CLF1YLR117C OST5Q92316 86 aa3.58□□□□□ -1.84
CLF1YLR117C YIR020CP40575 100 aa3.57□□□□□ -1.84
CLF1YLR117C YIL046W-AQ3E7Z4 54 aa3.57□□□□□ -1.84
CLF1YLR117C POL2P21951 2222 aaKnown RBP3.57□□□□□ -1.84
CLF1YLR117C UTH1P36135 365 aa3.56□□□□□ -1.84
CLF1YLR117C YGL088WP53151 121 aa3.56□□□□□ -1.84
CLF1YLR117C TSC3Q3E790 80 aa3.56□□□□□ -1.84
CLF1YLR117C YMR105W-AQ8TGS8 64 aa3.56□□□□□ -1.84
CLF1YLR117C RPS30AP0CX33 63 aaKnown RBP3.56□□□□□ -1.84
CLF1YLR117C RPS30BP0CX34 63 aaKnown RBP3.56□□□□□ -1.84
CLF1YLR117C YGL193CP53097 103 aa3.56□□□□□ -1.84
CLF1YLR117C YOL085CQ99345 113 aa3.56□□□□□ -1.84
CLF1YLR117C FAS1P07149 2051 aaKnown RBP3.55□□□□□ -1.84
CLF1YLR117C RPS23AP0CX29 145 aaKnown RBP3.55□□□□□ -1.84
CLF1YLR117C RPS23BP0CX30 145 aa3.55□□□□□ -1.84
CLF1YLR117C YGR025WP53216 100 aa3.55□□□□□ -1.84
CLF1YLR117C YFR009W-AP0C5M9 85 aa3.55□□□□□ -1.84
CLF1YLR117C MRPL39P36533 70 aa3.55□□□□□ -1.84
CLF1YLR117C YPR153WQ06537 140 aa3.55□□□□□ -1.84
CLF1YLR117C RNH203Q12338 110 aa3.55□□□□□ -1.84
CLF1YLR117C YHL037CP38733 133 aa3.54□□□□□ -1.84
CLF1YLR117C RPR2P40571 144 aa3.54□□□□□ -1.84
CLF1YLR117C SIP18P50263 79 aa3.54□□□□□ -1.84
CLF1YLR117C MRPL38P35996 138 aaPredicted RBP3.53□□□□□ -1.84
CLF1YLR117C FMP27Q06179 2628 aa3.53□□□□□ -1.84
CLF1YLR117C YAL064WP39711 94 aa3.53□□□□□ -1.84
CLF1YLR117C YLL006W-AQ3E814 58 aa3.53□□□□□ -1.84
CLF1YLR117C RPL39P04650 51 aa3.52□□□□□ -1.85
CLF1YLR117C POR2P40478 281 aa3.52□□□□□ -1.85
CLF1YLR117C YPS5P53057 165 aa3.52□□□□□ -1.85
CLF1YLR117C YMR244WQ04018 355 aa3.52□□□□□ -1.85
CLF1YLR117C COX14P39103 70 aa3.51□□□□□ -1.85
CLF1YLR117C SPG1P50088 95 aa3.51□□□□□ -1.85
CLF1YLR117C YER135CP40082 130 aa3.51□□□□□ -1.85
CLF1YLR117C HOT13P36078 116 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 154.2 ms