RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C BUD4P47136 1447 aa-0.49□□□□□ -2.49
AFB1YLR040C TY3B-IQ7LHG5 1498 aaKnown RBP-0.49□□□□□ -2.49
AFB1YLR040C COX12Q01519 83 aa-0.5□□□□□ -2.49
AFB1YLR040C PAU20Q08322 120 aa-0.5□□□□□ -2.49
AFB1YLR040C Q0032Q9ZZX7 96 aa-0.5□□□□□ -2.49
AFB1YLR040C TY2B-LR1P0C2J3 1770 aa-0.5□□□□□ -2.49
AFB1YLR040C TY2B-FP0CX63 1770 aa-0.5□□□□□ -2.49
AFB1YLR040C TY2B-GR2P0CX64 1770 aa-0.5□□□□□ -2.49
AFB1YLR040C TY2B-CP25384 1770 aa-0.5□□□□□ -2.49
AFB1YLR040C TY2B-DR2Q03494 1770 aa-0.5□□□□□ -2.49
AFB1YLR040C TY2B-DR3Q07791 1770 aaKnown RBP-0.5□□□□□ -2.49
AFB1YLR040C TY2B-OR1Q12113 1770 aa-0.5□□□□□ -2.49
AFB1YLR040C TY2B-DR1Q12472 1770 aa-0.5□□□□□ -2.49
AFB1YLR040C TY2B-BQ12491 1770 aa-0.5□□□□□ -2.49
AFB1YLR040C TY2B-OR2Q12501 1770 aa-0.5□□□□□ -2.49
AFB1YLR040C MOT1P32333 1867 aa-0.51□□□□□ -2.49
AFB1YLR040C SNA2P56508 79 aa-0.51□□□□□ -2.49
AFB1YLR040C YOR289WQ12012 251 aaPredicted RBP-0.51□□□□□ -2.49
AFB1YLR040C SPP41P38904 1435 aa-0.52□□□□□ -2.49
AFB1YLR040C UBC5P15732 148 aa-0.52□□□□□ -2.49
AFB1YLR040C YOS1Q3E834 85 aa-0.52□□□□□ -2.49
AFB1YLR040C KSH1Q8TGJ3 72 aa-0.52□□□□□ -2.49
AFB1YLR040C POL1P13382 1468 aa-0.53□□□□□ -2.49
AFB1YLR040C RSF2P46974 1380 aa-0.53□□□□□ -2.49
AFB1YLR040C YBR292CP38357 123 aa-0.53□□□□□ -2.49
AFB1YLR040C YBR201C-AQ2V2Q3 67 aa-0.53□□□□□ -2.49
AFB1YLR040C PAU1P0CE88 120 aa-0.54□□□□□ -2.5
AFB1YLR040C PAU14P0CE89 120 aa-0.54□□□□□ -2.5
AFB1YLR040C GNA1P43577 159 aaPredicted RBP-0.54□□□□□ -2.5
AFB1YLR040C YNL042W-BQ3E7Z2 85 aa-0.54□□□□□ -2.5
AFB1YLR040C YOR304C-AO14468 76 aa-0.55□□□□□ -2.5
AFB1YLR040C VMA21P41806 77 aa-0.55□□□□□ -2.5
AFB1YLR040C YMR122W-AQ3E842 84 aa-0.55□□□□□ -2.5
AFB1YLR040C PDR11P40550 1411 aa-0.55□□□□□ -2.5
AFB1YLR040C HMRA1P0CY11 126 aa-0.56□□□□□ -2.5
AFB1YLR040C SRB6P32570 121 aa-0.56□□□□□ -2.5
AFB1YLR040C RPL38P49167 78 aaKnown RBP-0.56□□□□□ -2.5
AFB1YLR040C MIX14Q04341 121 aa-0.56□□□□□ -2.5
AFB1YLR040C YBR090CP38253 122 aa-0.57□□□□□ -2.5
AFB1YLR040C YER137CP40083 148 aaKnown RBP-0.57□□□□□ -2.5
AFB1YLR040C AIM19P40502 157 aa-0.57□□□□□ -2.5
AFB1YLR040C YDR381C-AQ3E6R5 114 aa-0.57□□□□□ -2.5
AFB1YLR040C TSC11P40061 1430 aa-0.57□□□□□ -2.5
AFB1YLR040C COX7P10174 60 aa-0.58□□□□□ -2.5
AFB1YLR040C YBL044WP38194 122 aa-0.58□□□□□ -2.5
AFB1YLR040C YMR090WQ04304 227 aaKnown RBP-0.58□□□□□ -2.5
AFB1YLR040C SWC7Q06707 132 aa-0.58□□□□□ -2.5
AFB1YLR040C YHL005CP38752 130 aa-0.59□□□□□ -2.5
AFB1YLR040C NHP2P32495 156 aaPredicted RBP-0.6□□□□□ -2.51
AFB1YLR040C ATX1P38636 73 aa-0.6□□□□□ -2.51
AFB1YLR040C YDR246W-AQ3E763 66 aa-0.6□□□□□ -2.51
AFB1YLR040C GEA1P47102 1408 aaPredicted RBP-0.61□□□□□ -2.51
AFB1YLR040C YAL065CO13511 128 aa-0.61□□□□□ -2.51
AFB1YLR040C RPS12P48589 143 aaKnown RBP-0.61□□□□□ -2.51
AFB1YLR040C YIL156W-BQ2V2P4 73 aa-0.61□□□□□ -2.51
AFB1YLR040C TEL1P38110 2787 aa-0.62□□□□□ -2.51
AFB1YLR040C XRN1P22147 1528 aaKnown RBP-0.62□□□□□ -2.51
AFB1YLR040C GDB1Q06625 1536 aa-0.62□□□□□ -2.51
AFB1YLR040C EMC5P40540 141 aa-0.62□□□□□ -2.51
AFB1YLR040C PAU23Q07987 124 aa-0.62□□□□□ -2.51
AFB1YLR040C PAU17Q12370 124 aa-0.62□□□□□ -2.51
AFB1YLR040C TOR1P35169 2470 aa-0.62□□□□□ -2.51
AFB1YLR040C PDR10P51533 1564 aa-0.62□□□□□ -2.51
AFB1YLR040C PDX3P38075 228 aaKnown RBP-0.63□□□□□ -2.51
AFB1YLR040C BSC4P53841 131 aa-0.63□□□□□ -2.51
AFB1YLR040C ATP18P81450 59 aa-0.63□□□□□ -2.51
AFB1YLR040C YDR042CQ03205 200 aa-0.63□□□□□ -2.51
AFB1YLR040C SDH6Q3E785 79 aa-0.63□□□□□ -2.51
AFB1YLR040C TOM6P33448 61 aa-0.64□□□□□ -2.51
AFB1YLR040C NOP10Q6Q547 58 aaPredicted RBP-0.64□□□□□ -2.51
AFB1YLR040C REV3P14284 1504 aa-0.64□□□□□ -2.51
AFB1YLR040C SPO14P36126 1683 aa-0.65□□□□□ -2.51
AFB1YLR040C ECM12O13529 151 aa-0.65□□□□□ -2.51
AFB1YLR040C YHR214C-DP0CX93 97 aa-0.66□□□□□ -2.52
AFB1YLR040C YGR025WP53216 100 aa-0.66□□□□□ -2.52
AFB1YLR040C YDL022C-AP0C5L6 82 aa-0.67□□□□□ -2.52
AFB1YLR040C FPR2P32472 135 aa-0.67□□□□□ -2.52
AFB1YLR040C MSL1P40567 111 aaPredicted RBP-0.67□□□□□ -2.52
AFB1YLR040C YPR108W-AQ3E7B3 70 aa-0.67□□□□□ -2.52
AFB1YLR040C GEA2P39993 1459 aaKnown RBP-0.67□□□□□ -2.52
AFB1YLR040C SNU13P39990 126 aaKnown RBP-0.68□□□□□ -2.52
AFB1YLR040C MMS1Q06211 1407 aa-0.68□□□□□ -2.52
AFB1YLR040C SWR1Q05471 1514 aa-0.69□□□□□ -2.52
AFB1YLR040C YCR085WP25650 117 aa-0.69□□□□□ -2.52
AFB1YLR040C RPS27AP35997 82 aaKnown RBP-0.69□□□□□ -2.52
AFB1YLR040C RGI1P40043 161 aaPredicted RBP-0.69□□□□□ -2.52
AFB1YLR040C SCP1Q08873 200 aa-0.69□□□□□ -2.52
AFB1YLR040C YDR029WQ12111 104 aa-0.69□□□□□ -2.52
AFB1YLR040C YMR175W-AQ3E766 64 aa-0.69□□□□□ -2.52
AFB1YLR040C RPS29AP41057 56 aaKnown RBP-0.7□□□□□ -2.52
AFB1YLR040C EDC1P53080 175 aaPredicted RBP-0.7□□□□□ -2.52
AFB1YLR040C SIN3P22579 1536 aa-0.7□□□□□ -2.52
AFB1YLR040C GCN1P33892 2672 aaKnown RBP-0.71□□□□□ -2.52
AFB1YLR040C YMR082CQ04276 118 aa-0.71□□□□□ -2.52
AFB1YLR040C MLP1Q02455 1875 aaKnown RBP-0.71□□□□□ -2.52
AFB1YLR040C FMP27Q06179 2628 aa-0.72□□□□□ -2.52
AFB1YLR040C FYV7Q12247 151 aa-0.72□□□□□ -2.52
AFB1YLR040C YSP2Q06681 1438 aa-0.72□□□□□ -2.53
AFB1YLR040C FKS3Q04952 1785 aa-0.73□□□□□ -2.53
AFB1YLR040C MDS3P53094 1487 aa-0.73□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms