RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE2	YKL130C	YOR072W	Q08486	104 aa		1.06	□□□□□ -2.24
SHE2	YKL130C	YOR376W-A	Q3E805	51 aa		1.06	□□□□□ -2.24
SHE2	YKL130C	SEC16	P48415	2195 aa	Known RBP	1.06	□□□□□ -2.24
SHE2	YKL130C	RTC6	O14464	93 aa		1.05	□□□□□ -2.24
SHE2	YKL130C	ADK1	P07170	222 aa	Known RBP	1.05	□□□□□ -2.24
SHE2	YKL130C	GSP1	P32835	219 aa	Known RBP	1.05	□□□□□ -2.24
SHE2	YKL130C	HUA1	P40325	198 aa		1.05	□□□□□ -2.24
SHE2	YKL130C	YJL009W	P47078	108 aa		1.05	□□□□□ -2.24
SHE2	YKL130C	GPI19	Q04082	140 aa		1.05	□□□□□ -2.24
SHE2	YKL130C	YKL018C-A	Q3E7A7	99 aa		1.05	□□□□□ -2.24
SHE2	YKL130C	YKL068W-A	Q3E826	78 aa		1.05	□□□□□ -2.24
SHE2	YKL130C	MED11	Q99278	115 aa		1.05	□□□□□ -2.24
SHE2	YKL130C	PDX3	P38075	228 aa	Known RBP	1.04	□□□□□ -2.24
SHE2	YKL130C	YHR138C	P38841	114 aa	Predicted RBP	1.04	□□□□□ -2.24
SHE2	YKL130C	HPA2	Q06592	156 aa		1.04	□□□□□ -2.24
SHE2	YKL130C	YLR042C	Q07990	161 aa		1.04	□□□□□ -2.24
SHE2	YKL130C	YOR289W	Q12012	251 aa	Predicted RBP	1.04	□□□□□ -2.24
SHE2	YKL130C	YMR105W-A	Q8TGS8	64 aa		1.04	□□□□□ -2.24
SHE2	YKL130C	RPS22A	P0C0W1	130 aa	Known RBP	1.03	□□□□□ -2.24
SHE2	YKL130C	TDA2	P40045	126 aa		1.03	□□□□□ -2.24
SHE2	YKL130C	PAM16	P42949	149 aa		1.03	□□□□□ -2.24
SHE2	YKL130C	YFR035C	P43608	114 aa		1.03	□□□□□ -2.24
SHE2	YKL130C	VPS55	P47111	140 aa		1.03	□□□□□ -2.24
SHE2	YKL130C	PAU12	P53343	120 aa		1.03	□□□□□ -2.24
SHE2	YKL130C	RUB1	Q03919	77 aa		1.03	□□□□□ -2.24
SHE2	YKL130C	RPS22B	Q3E7Y3	130 aa	Known RBP	1.03	□□□□□ -2.24
SHE2	YKL130C	YCR075W-A	Q3E830	75 aa		1.03	□□□□□ -2.24
SHE2	YKL130C	YOS1	Q3E834	85 aa		1.03	□□□□□ -2.24
SHE2	YKL130C	COX9	P07255	59 aa		1.02	□□□□□ -2.25
SHE2	YKL130C	URA2	P07259	2214 aa	Known RBP	1.02	□□□□□ -2.25
SHE2	YKL130C	YOL013W-A	P0C272	63 aa	Predicted RBP	1.02	□□□□□ -2.25
SHE2	YKL130C	ROX3	P25046	220 aa		1.02	□□□□□ -2.25
SHE2	YKL130C	PAU24	P38155	120 aa		1.02	□□□□□ -2.25
SHE2	YKL130C	AIM4	P38305	123 aa	Predicted RBP	1.02	□□□□□ -2.25
SHE2	YKL130C	MPC2	P38857	129 aa		1.02	□□□□□ -2.25
SHE2	YKL130C	YAR029W	P39549	74 aa		1.02	□□□□□ -2.25
SHE2	YKL130C	MGR2	Q02889	113 aa		1.02	□□□□□ -2.25
SHE2	YKL130C	BLM10	P43583	2143 aa		1.01	□□□□□ -2.25
SHE2	YKL130C	PAU2	P32612	120 aa		1.01	□□□□□ -2.25
SHE2	YKL130C	MRPL38	P35996	138 aa	Predicted RBP	1.01	□□□□□ -2.25
SHE2	YKL130C	SGF11	Q03067	99 aa		1.01	□□□□□ -2.25
SHE2	YKL130C	YLR194C	Q05777	254 aa		1.01	□□□□□ -2.25
SHE2	YKL130C	YPL261C	Q08976	102 aa		1.01	□□□□□ -2.25
SHE2	YKL130C	COA6	Q3E846	104 aa		1.01	□□□□□ -2.25
SHE2	YKL130C	OST5	Q92316	86 aa		1.01	□□□□□ -2.25
SHE2	YKL130C	YJL197C-A	P0C5P0	93 aa		1	□□□□□ -2.25
SHE2	YKL130C	BUD23	P25627	275 aa	Predicted RBP	1	□□□□□ -2.25
SHE2	YKL130C	YHR130C	P38834	111 aa		1	□□□□□ -2.25
SHE2	YKL130C	POR2	P40478	281 aa		1	□□□□□ -2.25
SHE2	YKL130C	RPL37A	P49166	88 aa	Known RBP	1	□□□□□ -2.25
SHE2	YKL130C	YIL014C-A	Q02598	104 aa		1	□□□□□ -2.25
SHE2	YKL130C	SUS1	Q6WNK7	96 aa		1	□□□□□ -2.25
SHE2	YKL130C	YER039C-A	P0CD97	72 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	EMP24	P32803	203 aa	Known RBP	0.99	□□□□□ -2.25
SHE2	YKL130C	YBL071C	P38185	102 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	YBR013C	P38215	129 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	YER187W	P40102	141 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	YIL163C	P40448	117 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	GTT1	P40582	234 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	MIC27	P50945	234 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	COX12	Q01519	83 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	SCP1	Q08873	200 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	DAD1	Q12248	94 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	YGL258W-A	Q3E740	77 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	YLR365W	Q7LIF2	110 aa		0.99	□□□□□ -2.25
SHE2	YKL130C	BPH1	P25356	2167 aa		0.98	□□□□□ -2.25
SHE2	YKL130C	MRP17	P28778	131 aa		0.98	□□□□□ -2.25
SHE2	YKL130C	FPR2	P32472	135 aa		0.98	□□□□□ -2.25
SHE2	YKL130C	MVB12	P42939	101 aa		0.98	□□□□□ -2.25
SHE2	YKL130C	SPC1	P46965	94 aa		0.98	□□□□□ -2.25
SHE2	YKL130C	YGR164W	P53291	111 aa		0.98	□□□□□ -2.25
SHE2	YKL130C	YPR108W-A	Q3E7B3	70 aa		0.98	□□□□□ -2.25
SHE2	YKL130C	PCC1	Q3E833	88 aa		0.98	□□□□□ -2.25
SHE2	YKL130C	YHR213W-B	Q8TGK1	99 aa		0.98	□□□□□ -2.25
SHE2	YKL130C	RPS11A	P0CX47	156 aa	Known RBP	0.97	□□□□□ -2.25
SHE2	YKL130C	RPS11B	P0CX48	156 aa	Known RBP	0.97	□□□□□ -2.25
SHE2	YKL130C	HHY1	P39982	102 aa		0.97	□□□□□ -2.25
SHE2	YKL130C	YER137C	P40083	148 aa	Known RBP	0.97	□□□□□ -2.25
SHE2	YKL130C	SWM2	P40342	146 aa		0.97	□□□□□ -2.25
SHE2	YKL130C	SNN1	P48232	102 aa		0.97	□□□□□ -2.25
SHE2	YKL130C	YMR090W	Q04304	227 aa	Known RBP	0.97	□□□□□ -2.25
SHE2	YKL130C	YPL225W	Q08971	146 aa	Known RBP	0.97	□□□□□ -2.25
SHE2	YKL130C	YPR145C-A	Q2V2P0	78 aa		0.97	□□□□□ -2.25
SHE2	YKL130C	YOR192C-C	Q3E736	78 aa		0.97	□□□□□ -2.25
SHE2	YKL130C	YPR010C-A	A5Z2X5	72 aa		0.96	□□□□□ -2.26
SHE2	YKL130C	MRPL31	P14063	131 aa	Predicted RBP	0.96	□□□□□ -2.26
SHE2	YKL130C	AUA1	P32450	94 aa		0.96	□□□□□ -2.26
SHE2	YKL130C	COX23	P38824	151 aa		0.96	□□□□□ -2.26
SHE2	YKL130C	CYB5	P40312	120 aa		0.96	□□□□□ -2.26
SHE2	YKL130C	ICS3	P47034	131 aa		0.96	□□□□□ -2.26
SHE2	YKL130C	YLR363W-A	Q3E747	85 aa		0.96	□□□□□ -2.26
SHE2	YKL130C	YOR011W-A	Q3E807	68 aa		0.96	□□□□□ -2.26
SHE2	YKL130C	HUG1	Q6Q5K6	68 aa		0.96	□□□□□ -2.26
SHE2	YKL130C	ENV10	Q99382	181 aa		0.96	□□□□□ -2.26
SHE2	YKL130C	EMC5	P40540	141 aa		0.95	□□□□□ -2.26
SHE2	YKL130C	VMA21	P41806	77 aa		0.95	□□□□□ -2.26
SHE2	YKL130C	HUR1	P45820	110 aa		0.95	□□□□□ -2.26
SHE2	YKL130C	ERI1	P62651	68 aa	Known RBP	0.95	□□□□□ -2.26
SHE2	YKL130C	YOL118C	Q08259	102 aa		0.95	□□□□□ -2.26
SHE2	YKL130C	YLR146W-A	Q2V2P1	62 aa		0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms