RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C YOR072WQ08486 104 aa1.06□□□□□ -2.24
SHE2YKL130C YOR376W-AQ3E805 51 aa1.06□□□□□ -2.24
SHE2YKL130C SEC16P48415 2195 aaKnown RBP1.06□□□□□ -2.24
SHE2YKL130C RTC6O14464 93 aa1.05□□□□□ -2.24
SHE2YKL130C ADK1P07170 222 aaKnown RBP1.05□□□□□ -2.24
SHE2YKL130C GSP1P32835 219 aaKnown RBP1.05□□□□□ -2.24
SHE2YKL130C HUA1P40325 198 aa1.05□□□□□ -2.24
SHE2YKL130C YJL009WP47078 108 aa1.05□□□□□ -2.24
SHE2YKL130C GPI19Q04082 140 aa1.05□□□□□ -2.24
SHE2YKL130C YKL018C-AQ3E7A7 99 aa1.05□□□□□ -2.24
SHE2YKL130C YKL068W-AQ3E826 78 aa1.05□□□□□ -2.24
SHE2YKL130C MED11Q99278 115 aa1.05□□□□□ -2.24
SHE2YKL130C PDX3P38075 228 aaKnown RBP1.04□□□□□ -2.24
SHE2YKL130C YHR138CP38841 114 aaPredicted RBP1.04□□□□□ -2.24
SHE2YKL130C HPA2Q06592 156 aa1.04□□□□□ -2.24
SHE2YKL130C YLR042CQ07990 161 aa1.04□□□□□ -2.24
SHE2YKL130C YOR289WQ12012 251 aaPredicted RBP1.04□□□□□ -2.24
SHE2YKL130C YMR105W-AQ8TGS8 64 aa1.04□□□□□ -2.24
SHE2YKL130C RPS22AP0C0W1 130 aaKnown RBP1.03□□□□□ -2.24
SHE2YKL130C TDA2P40045 126 aa1.03□□□□□ -2.24
SHE2YKL130C PAM16P42949 149 aa1.03□□□□□ -2.24
SHE2YKL130C YFR035CP43608 114 aa1.03□□□□□ -2.24
SHE2YKL130C VPS55P47111 140 aa1.03□□□□□ -2.24
SHE2YKL130C PAU12P53343 120 aa1.03□□□□□ -2.24
SHE2YKL130C RUB1Q03919 77 aa1.03□□□□□ -2.24
SHE2YKL130C RPS22BQ3E7Y3 130 aaKnown RBP1.03□□□□□ -2.24
SHE2YKL130C YCR075W-AQ3E830 75 aa1.03□□□□□ -2.24
SHE2YKL130C YOS1Q3E834 85 aa1.03□□□□□ -2.24
SHE2YKL130C COX9P07255 59 aa1.02□□□□□ -2.25
SHE2YKL130C URA2P07259 2214 aaKnown RBP1.02□□□□□ -2.25
SHE2YKL130C YOL013W-AP0C272 63 aaPredicted RBP1.02□□□□□ -2.25
SHE2YKL130C ROX3P25046 220 aa1.02□□□□□ -2.25
SHE2YKL130C PAU24P38155 120 aa1.02□□□□□ -2.25
SHE2YKL130C AIM4P38305 123 aaPredicted RBP1.02□□□□□ -2.25
SHE2YKL130C MPC2P38857 129 aa1.02□□□□□ -2.25
SHE2YKL130C YAR029WP39549 74 aa1.02□□□□□ -2.25
SHE2YKL130C MGR2Q02889 113 aa1.02□□□□□ -2.25
SHE2YKL130C BLM10P43583 2143 aa1.01□□□□□ -2.25
SHE2YKL130C PAU2P32612 120 aa1.01□□□□□ -2.25
SHE2YKL130C MRPL38P35996 138 aaPredicted RBP1.01□□□□□ -2.25
SHE2YKL130C SGF11Q03067 99 aa1.01□□□□□ -2.25
SHE2YKL130C YLR194CQ05777 254 aa1.01□□□□□ -2.25
SHE2YKL130C YPL261CQ08976 102 aa1.01□□□□□ -2.25
SHE2YKL130C COA6Q3E846 104 aa1.01□□□□□ -2.25
SHE2YKL130C OST5Q92316 86 aa1.01□□□□□ -2.25
SHE2YKL130C YJL197C-AP0C5P0 93 aa1□□□□□ -2.25
SHE2YKL130C BUD23P25627 275 aaPredicted RBP1□□□□□ -2.25
SHE2YKL130C YHR130CP38834 111 aa1□□□□□ -2.25
SHE2YKL130C POR2P40478 281 aa1□□□□□ -2.25
SHE2YKL130C RPL37AP49166 88 aaKnown RBP1□□□□□ -2.25
SHE2YKL130C YIL014C-AQ02598 104 aa1□□□□□ -2.25
SHE2YKL130C SUS1Q6WNK7 96 aa1□□□□□ -2.25
SHE2YKL130C YER039C-AP0CD97 72 aa0.99□□□□□ -2.25
SHE2YKL130C EMP24P32803 203 aaKnown RBP0.99□□□□□ -2.25
SHE2YKL130C YBL071CP38185 102 aa0.99□□□□□ -2.25
SHE2YKL130C YBR013CP38215 129 aa0.99□□□□□ -2.25
SHE2YKL130C YER187WP40102 141 aa0.99□□□□□ -2.25
SHE2YKL130C YIL163CP40448 117 aa0.99□□□□□ -2.25
SHE2YKL130C GTT1P40582 234 aa0.99□□□□□ -2.25
SHE2YKL130C MIC27P50945 234 aa0.99□□□□□ -2.25
SHE2YKL130C COX12Q01519 83 aa0.99□□□□□ -2.25
SHE2YKL130C SCP1Q08873 200 aa0.99□□□□□ -2.25
SHE2YKL130C DAD1Q12248 94 aa0.99□□□□□ -2.25
SHE2YKL130C YGL258W-AQ3E740 77 aa0.99□□□□□ -2.25
SHE2YKL130C YLR365WQ7LIF2 110 aa0.99□□□□□ -2.25
SHE2YKL130C BPH1P25356 2167 aa0.98□□□□□ -2.25
SHE2YKL130C MRP17P28778 131 aa0.98□□□□□ -2.25
SHE2YKL130C FPR2P32472 135 aa0.98□□□□□ -2.25
SHE2YKL130C MVB12P42939 101 aa0.98□□□□□ -2.25
SHE2YKL130C SPC1P46965 94 aa0.98□□□□□ -2.25
SHE2YKL130C YGR164WP53291 111 aa0.98□□□□□ -2.25
SHE2YKL130C YPR108W-AQ3E7B3 70 aa0.98□□□□□ -2.25
SHE2YKL130C PCC1Q3E833 88 aa0.98□□□□□ -2.25
SHE2YKL130C YHR213W-BQ8TGK1 99 aa0.98□□□□□ -2.25
SHE2YKL130C RPS11AP0CX47 156 aaKnown RBP0.97□□□□□ -2.25
SHE2YKL130C RPS11BP0CX48 156 aaKnown RBP0.97□□□□□ -2.25
SHE2YKL130C HHY1P39982 102 aa0.97□□□□□ -2.25
SHE2YKL130C YER137CP40083 148 aaKnown RBP0.97□□□□□ -2.25
SHE2YKL130C SWM2P40342 146 aa0.97□□□□□ -2.25
SHE2YKL130C SNN1P48232 102 aa0.97□□□□□ -2.25
SHE2YKL130C YMR090WQ04304 227 aaKnown RBP0.97□□□□□ -2.25
SHE2YKL130C YPL225WQ08971 146 aaKnown RBP0.97□□□□□ -2.25
SHE2YKL130C YPR145C-AQ2V2P0 78 aa0.97□□□□□ -2.25
SHE2YKL130C YOR192C-CQ3E736 78 aa0.97□□□□□ -2.25
SHE2YKL130C YPR010C-AA5Z2X5 72 aa0.96□□□□□ -2.26
SHE2YKL130C MRPL31P14063 131 aaPredicted RBP0.96□□□□□ -2.26
SHE2YKL130C AUA1P32450 94 aa0.96□□□□□ -2.26
SHE2YKL130C COX23P38824 151 aa0.96□□□□□ -2.26
SHE2YKL130C CYB5P40312 120 aa0.96□□□□□ -2.26
SHE2YKL130C ICS3P47034 131 aa0.96□□□□□ -2.26
SHE2YKL130C YLR363W-AQ3E747 85 aa0.96□□□□□ -2.26
SHE2YKL130C YOR011W-AQ3E807 68 aa0.96□□□□□ -2.26
SHE2YKL130C HUG1Q6Q5K6 68 aa0.96□□□□□ -2.26
SHE2YKL130C ENV10Q99382 181 aa0.96□□□□□ -2.26
SHE2YKL130C EMC5P40540 141 aa0.95□□□□□ -2.26
SHE2YKL130C VMA21P41806 77 aa0.95□□□□□ -2.26
SHE2YKL130C HUR1P45820 110 aa0.95□□□□□ -2.26
SHE2YKL130C ERI1P62651 68 aaKnown RBP0.95□□□□□ -2.26
SHE2YKL130C YOL118CQ08259 102 aa0.95□□□□□ -2.26
SHE2YKL130C YLR146W-AQ2V2P1 62 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms