RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W REE1P40893 198 aa2.36□□□□□ -2.03
PHD1YKL043W RPL15BP54780 204 aaPredicted RBP2.36□□□□□ -2.03
PHD1YKL043W YML122CQ03207 126 aa2.36□□□□□ -2.03
PHD1YKL043W YMR320WQ04897 101 aa2.36□□□□□ -2.03
PHD1YKL043W NCE102Q12207 173 aaRIP-Chip data2.36□□□□□ -2.03not detected
PHD1YKL043W RNH203Q12338 110 aa2.36□□□□□ -2.03
PHD1YKL043W YKL065W-AQ2V2P2 73 aa2.36□□□□□ -2.03
PHD1YKL043W YLR236CA0A023PZG4 107 aa2.35□□□□□ -2.03
PHD1YKL043W ATP15P21306 62 aa2.35□□□□□ -2.03
PHD1YKL043W SPT4P32914 102 aaPredicted RBP2.35□□□□□ -2.03
PHD1YKL043W SHU1P38751 150 aa2.35□□□□□ -2.03
PHD1YKL043W YJL027CP47063 138 aaPredicted RBP2.35□□□□□ -2.03
PHD1YKL043W YJR146WP47174 117 aa2.35□□□□□ -2.03
PHD1YKL043W IRC21Q04772 201 aa2.35□□□□□ -2.03
PHD1YKL043W YLR281CQ05863 155 aa2.35□□□□□ -2.03
PHD1YKL043W PBP4Q07362 185 aaKnown RBP2.35□□□□□ -2.03
PHD1YKL043W GAT3Q07928 141 aa2.35□□□□□ -2.03
PHD1YKL043W YBR144CP34215 104 aa2.34□□□□□ -2.03
PHD1YKL043W AIM4P38305 123 aaPredicted RBP2.34□□□□□ -2.03
PHD1YKL043W YAR029WP39549 74 aa2.34□□□□□ -2.03
PHD1YKL043W PEX22P39718 180 aa2.34□□□□□ -2.03
PHD1YKL043W YER084WP40057 128 aa2.34□□□□□ -2.03
PHD1YKL043W VHS2P40463 436 aa2.34□□□□□ -2.03
PHD1YKL043W ARC15P40518 154 aaRIP-Chip data2.34□□□□□ -2.03not detected
PHD1YKL043W SRL1Q08673 210 aa2.34□□□□□ -2.03
PHD1YKL043W PRM7Q12459 698 aa2.34□□□□□ -2.03
PHD1YKL043W YOR314WQ12506 109 aa2.34□□□□□ -2.03
PHD1YKL043W YLR285C-AQ3E771 56 aa2.34□□□□□ -2.03
PHD1YKL043W TDA8Q6B2U8 126 aa2.34□□□□□ -2.03
PHD1YKL043W RPL11AP0C0W9 174 aaKnown RBP2.33□□□□□ -2.04
PHD1YKL043W YJR107C-AP0CT86 78 aa2.33□□□□□ -2.04
PHD1YKL043W RPL16AP26784 199 aaKnown RBP2.33□□□□□ -2.04
PHD1YKL043W YHL005CP38752 130 aa2.33□□□□□ -2.04
PHD1YKL043W RSM18P40033 138 aa2.33□□□□□ -2.04
PHD1YKL043W POR2P40478 281 aa2.33□□□□□ -2.04
PHD1YKL043W YFL015CP43578 164 aa2.33□□□□□ -2.04
PHD1YKL043W SPG4Q04438 115 aa2.33□□□□□ -2.04
PHD1YKL043W CCW12Q12127 133 aa2.33□□□□□ -2.04
PHD1YKL043W ATP20Q12233 115 aa2.33□□□□□ -2.04
PHD1YKL043W RPL11BQ3E757 174 aaPredicted RBP2.33□□□□□ -2.04
PHD1YKL043W RPL36BO14455 100 aaKnown RBP2.32□□□□□ -2.04
PHD1YKL043W HHF1P02309 103 aaKnown RBP2.32□□□□□ -2.04
PHD1YKL043W RPL36AP05745 100 aaPredicted RBP2.32□□□□□ -2.04
PHD1YKL043W YLR156WP0CE96 114 aa2.32□□□□□ -2.04
PHD1YKL043W YLR159WP0CE97 114 aa2.32□□□□□ -2.04
PHD1YKL043W YLR161WP0CE98 114 aa2.32□□□□□ -2.04
PHD1YKL043W YKR045CP36138 183 aa2.32□□□□□ -2.04
PHD1YKL043W RPR2P40571 144 aa2.32□□□□□ -2.04
PHD1YKL043W PIR5P46999 287 aa2.32□□□□□ -2.04
PHD1YKL043W SIP18P50263 79 aa2.32□□□□□ -2.04
PHD1YKL043W ICY1Q04329 127 aa2.32□□□□□ -2.04
PHD1YKL043W YLR162WQ06235 118 aa2.32□□□□□ -2.04
PHD1YKL043W YBR200W-AQ3E755 54 aa2.32□□□□□ -2.04
PHD1YKL043W KEG1P43614 200 aa2.31□□□□□ -2.04
PHD1YKL043W ICS3P47034 131 aa2.31□□□□□ -2.04
PHD1YKL043W YPS5P53057 165 aa2.31□□□□□ -2.04
PHD1YKL043W MPC3P53311 146 aa2.31□□□□□ -2.04
PHD1YKL043W YNL190WP53872 204 aa2.31□□□□□ -2.04
PHD1YKL043W YOL160WQ08321 113 aa2.31□□□□□ -2.04
PHD1YKL043W CRC1Q12289 327 aa2.31□□□□□ -2.04
PHD1YKL043W RPS23AP0CX29 145 aaKnown RBP2.3□□□□□ -2.04
PHD1YKL043W RPS23BP0CX30 145 aa2.3□□□□□ -2.04
PHD1YKL043W YFL019CP43576 117 aa2.3□□□□□ -2.04
PHD1YKL043W ERI1P62651 68 aaKnown RBP2.3□□□□□ -2.04
PHD1YKL043W YMR295CQ03559 197 aa2.3□□□□□ -2.04
PHD1YKL043W COX17Q12287 69 aa2.3□□□□□ -2.04
PHD1YKL043W YGR121W-AQ3E816 71 aa2.3□□□□□ -2.04
PHD1YKL043W RPL43AP0CX25 92 aaKnown RBP2.29□□□□□ -2.04
PHD1YKL043W RPL43BP0CX26 92 aa2.29□□□□□ -2.04
PHD1YKL043W RPB9P27999 122 aa2.29□□□□□ -2.04
PHD1YKL043W YBR209WP38311 105 aa2.29□□□□□ -2.04
PHD1YKL043W YHL037CP38733 133 aa2.29□□□□□ -2.04
PHD1YKL043W COX14P39103 70 aa2.29□□□□□ -2.04
PHD1YKL043W YEL008WP40001 126 aa2.29□□□□□ -2.04
PHD1YKL043W YNL234WP53857 426 aa2.29□□□□□ -2.04
PHD1YKL043W ATP18P81450 59 aa2.29□□□□□ -2.04
PHD1YKL043W SMD1Q02260 146 aaPredicted RBP2.29□□□□□ -2.04
PHD1YKL043W YMR105W-AQ8TGS8 64 aa2.29□□□□□ -2.04
PHD1YKL043W MIC10Q96VH5 97 aa2.29□□□□□ -2.04
PHD1YKL043W BPH1P25356 2167 aa2.28□□□□□ -2.04
PHD1YKL043W RPL26AP05743 127 aaKnown RBP2.28□□□□□ -2.04
PHD1YKL043W RPL29P05747 59 aaPredicted RBP2.28□□□□□ -2.04
PHD1YKL043W SPG1P50088 95 aa2.28□□□□□ -2.04
PHD1YKL043W TOS8P53147 276 aa2.28□□□□□ -2.04
PHD1YKL043W YDR274CP87283 123 aa2.28□□□□□ -2.04
PHD1YKL043W YOL166W-AQ8TGJ1 51 aa2.28□□□□□ -2.04
PHD1YKL043W RPL15AP05748 204 aaKnown RBP2.27□□□□□ -2.05
PHD1YKL043W MRPL38P35996 138 aaPredicted RBP2.27□□□□□ -2.05
PHD1YKL043W HOT13P36078 116 aa2.27□□□□□ -2.05
PHD1YKL043W KRE9P39005 276 aa2.27□□□□□ -2.05
PHD1YKL043W YFR035CP43608 114 aa2.27□□□□□ -2.05
PHD1YKL043W YGL193CP53097 103 aa2.27□□□□□ -2.05
PHD1YKL043W RPL26BP53221 127 aaKnown RBP2.27□□□□□ -2.05
PHD1YKL043W TSC3Q3E790 80 aa2.27□□□□□ -2.05
PHD1YKL043W YNL146C-AQ3E7Z1 64 aa2.27□□□□□ -2.05
PHD1YKL043W YOR381W-AQ3E804 55 aa2.27□□□□□ -2.05
PHD1YKL043W YGR035W-AQ45U48 73 aa2.27□□□□□ -2.05
PHD1YKL043W NOP10Q6Q547 58 aaPredicted RBP2.27□□□□□ -2.05
PHD1YKL043W TDA2P40045 126 aa2.26□□□□□ -2.05
PHD1YKL043W YMR122CQ03879 124 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms