RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W SEC11P15367 167 aa2.63□□□□□ -1.99
NUP85YJR042W QCR10P37299 77 aa2.63□□□□□ -1.99
NUP85YJR042W PAU7P39545 55 aa2.63□□□□□ -1.99
NUP85YJR042W YEL067CP39978 195 aa2.63□□□□□ -1.99
NUP85YJR042W MSL1P40567 111 aaPredicted RBP2.63□□□□□ -1.99
NUP85YJR042W LST8P41318 303 aa2.63□□□□□ -1.99
NUP85YJR042W KSH1Q8TGJ3 72 aa2.63□□□□□ -1.99
NUP85YJR042W YMR105W-AQ8TGS8 64 aa2.63□□□□□ -1.99
NUP85YJR042W YKR032WP36127 104 aa2.62□□□□□ -1.99
NUP85YJR042W YHL037CP38733 133 aa2.62□□□□□ -1.99
NUP85YJR042W YPI1P43587 155 aa2.62□□□□□ -1.99
NUP85YJR042W THG1P53215 237 aaKnown RBP2.62□□□□□ -1.99
NUP85YJR042W UPS3Q04006 179 aa2.62□□□□□ -1.99
NUP85YJR042W RRT15Q3E811 62 aa2.62□□□□□ -1.99
NUP85YJR042W RPL39P04650 51 aa2.62□□□□□ -1.99
NUP85YJR042W LSM2P38203 95 aaKnown RBP2.62□□□□□ -1.99
NUP85YJR042W TOM7P53507 60 aa2.62□□□□□ -1.99
NUP85YJR042W GPI19Q04082 140 aa2.62□□□□□ -1.99
NUP85YJR042W YLR236CA0A023PZG4 107 aa2.61□□□□□ -1.99
NUP85YJR042W YFL051CP43552 160 aa2.61□□□□□ -1.99
NUP85YJR042W SPG1P50088 95 aa2.61□□□□□ -1.99
NUP85YJR042W MIX17Q03667 156 aa2.61□□□□□ -1.99
NUP85YJR042W YDR029WQ12111 104 aa2.61□□□□□ -1.99
NUP85YJR042W CSF1Q12150 2958 aa2.61□□□□□ -1.99
NUP85YJR042W YEL045CP32616 141 aa2.61□□□□□ -1.99
NUP85YJR042W YJR146WP47174 117 aa2.61□□□□□ -1.99
NUP85YJR042W POP3P53833 195 aaPredicted RBP2.61□□□□□ -1.99
NUP85YJR042W CMC4Q3E7A9 73 aa2.61□□□□□ -1.99
NUP85YJR042W YHR213WP0CI67 198 aa2.6□□□□□ -1.99
NUP85YJR042W YKR045CP36138 183 aa2.6□□□□□ -1.99
NUP85YJR042W DAD4P69851 72 aa2.6□□□□□ -1.99
NUP85YJR042W SED1Q01589 338 aa2.6□□□□□ -1.99
NUP85YJR042W YML079WQ03629 201 aa2.6□□□□□ -1.99
NUP85YJR042W DAD1Q12248 94 aa2.6□□□□□ -1.99
NUP85YJR042W YLR363W-AQ3E747 85 aa2.6□□□□□ -1.99
NUP85YJR042W HUA1P40325 198 aa2.6□□□□□ -1.99
NUP85YJR042W YDR042CQ03205 200 aa2.6□□□□□ -1.99
NUP85YJR042W YPR195CQ06594 109 aa2.6□□□□□ -1.99
NUP85YJR042W YPR013CQ12145 317 aa2.6□□□□□ -1.99
NUP85YJR042W YLR342W-AQ3E810 57 aa2.6□□□□□ -1.99
NUP85YJR042W UBC4P15731 148 aa2.59□□□□□ -1.99
NUP85YJR042W YHL018WP38744 120 aaPredicted RBP2.59□□□□□ -1.99
NUP85YJR042W RPL33BP41056 107 aaKnown RBP2.59□□□□□ -1.99
NUP85YJR042W IMP2P46972 177 aa2.59□□□□□ -1.99
NUP85YJR042W YGR164WP53291 111 aa2.59□□□□□ -1.99
NUP85YJR042W TMC1Q08422 150 aaPredicted RBP2.59□□□□□ -1.99
NUP85YJR042W YIL014C-AQ02598 104 aa2.58□□□□□ -2
NUP85YJR042W YMR141CP40211 102 aa2.57□□□□□ -2
NUP85YJR042W MGR2Q02889 113 aa2.57□□□□□ -2
NUP85YJR042W PAI3P01094 68 aa2.57□□□□□ -2
NUP85YJR042W MRPL38P35996 138 aaPredicted RBP2.57□□□□□ -2
NUP85YJR042W YGL149WP53116 101 aa2.57□□□□□ -2
NUP85YJR042W RSM19P53733 91 aaPredicted RBP2.57□□□□□ -2
NUP85YJR042W PFY1P07274 126 aa2.56□□□□□ -2
NUP85YJR042W SPI1P40092 148 aa2.56□□□□□ -2
NUP85YJR042W YLR296WQ05898 108 aa2.56□□□□□ -2
NUP85YJR042W YKL023C-AQ2V2P3 75 aa2.56□□□□□ -2
NUP85YJR042W YIL102C-AQ2V2P5 75 aa2.56□□□□□ -2
NUP85YJR042W RTC6O14464 93 aa2.56□□□□□ -2
NUP85YJR042W YCL048W-AQ2V2Q2 79 aa2.56□□□□□ -2
NUP85YJR042W COX8P04039 78 aa2.55□□□□□ -2
NUP85YJR042W RPL26AP05743 127 aaKnown RBP2.55□□□□□ -2
NUP85YJR042W YNL198CP40166 100 aa2.55□□□□□ -2
NUP85YJR042W POR2P40478 281 aa2.55□□□□□ -2
NUP85YJR042W RPL26BP53221 127 aaKnown RBP2.55□□□□□ -2
NUP85YJR042W DCV1P43595 202 aa2.54□□□□□ -2
NUP85YJR042W TOS6P48560 102 aa2.54□□□□□ -2
NUP85YJR042W YER187WP40102 141 aa2.54□□□□□ -2
NUP85YJR042W YGL260WP53056 76 aa2.54□□□□□ -2
NUP85YJR042W KRE1P17260 313 aa2.53□□□□□ -2
NUP85YJR042W BPH1P25356 2167 aa2.53□□□□□ -2
NUP85YJR042W COA3Q3E7B2 85 aa2.53□□□□□ -2
NUP85YJR042W YPL261CQ08976 102 aa2.52□□□□□ -2.01
NUP85YJR042W CWP2P43497 92 aa2.52□□□□□ -2.01
NUP85YJR042W HMRA2P0CY13 119 aa2.51□□□□□ -2.01
NUP85YJR042W CCW12Q12127 133 aa2.51□□□□□ -2.01
NUP85YJR042W YHR022CP38763 256 aa2.5□□□□□ -2.01
NUP85YJR042W YIR020CP40575 100 aa2.5□□□□□ -2.01
NUP85YJR042W YLR194CQ05777 254 aa2.5□□□□□ -2.01
NUP85YJR042W YPR153WQ06537 140 aa2.5□□□□□ -2.01
NUP85YJR042W YOR008C-AQ3E7B9 74 aa2.5□□□□□ -2.01
NUP85YJR042W ECM12O13529 151 aa2.5□□□□□ -2.01
NUP85YJR042W CCW14O13547 238 aa2.5□□□□□ -2.01
NUP85YJR042W PRM3Q08931 133 aa2.5□□□□□ -2.01
NUP85YJR042W YNL146C-AQ3E7Z1 64 aa2.5□□□□□ -2.01
NUP85YJR042W YBR209WP38311 105 aa2.49□□□□□ -2.01
NUP85YJR042W YBR200W-AQ3E755 54 aa2.49□□□□□ -2.01
NUP85YJR042W HUR1P45820 110 aa2.49□□□□□ -2.01
NUP85YJR042W LSM6Q06406 86 aaKnown RBP2.49□□□□□ -2.01
NUP85YJR042W IRA2P19158 3079 aa2.48□□□□□ -2.01
NUP85YJR042W YDL022C-AP0C5L6 82 aa2.48□□□□□ -2.01
NUP85YJR042W NHP2P32495 156 aaPredicted RBP2.48□□□□□ -2.01
NUP85YJR042W COX23P38824 151 aa2.48□□□□□ -2.01
NUP85YJR042W SVP26P38869 228 aa2.48□□□□□ -2.01
NUP85YJR042W GCN1P33892 2672 aaKnown RBP2.48□□□□□ -2.01
NUP85YJR042W TOR2P32600 2474 aaKnown RBP2.48□□□□□ -2.01
NUP85YJR042W YGR025WP53216 100 aa2.48□□□□□ -2.01
NUP85YJR042W RDS3Q06835 107 aaPredicted RBP2.48□□□□□ -2.01
NUP85YJR042W IRA1P18963 3092 aa2.47□□□□□ -2.01
NUP85YJR042W ATX1P38636 73 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 51 ms