RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C YOR343CQ12484 108 aa2.08□□□□□ -2.08
MSM1YGR171C THO2P53552 1597 aaKnown RBP2.07□□□□□ -2.08
MSM1YGR171C RKR1Q04781 1562 aa2.07□□□□□ -2.08
MSM1YGR171C TIM12P32830 109 aa2.07□□□□□ -2.08
MSM1YGR171C YBR219CP38317 127 aa2.07□□□□□ -2.08
MSM1YGR171C RPS22BQ3E7Y3 130 aaKnown RBP2.07□□□□□ -2.08
MSM1YGR171C QCR8P08525 94 aa2.06□□□□□ -2.08
MSM1YGR171C MRPL31P14063 131 aaPredicted RBP2.06□□□□□ -2.08
MSM1YGR171C CHC1P22137 1653 aaKnown RBP2.06□□□□□ -2.08
MSM1YGR171C RIF1P29539 1916 aa2.06□□□□□ -2.08
MSM1YGR171C SED1Q01589 338 aa2.05□□□□□ -2.08
MSM1YGR171C NTE1Q04958 1679 aa2.05□□□□□ -2.08
MSM1YGR171C YOR314WQ12506 109 aa2.05□□□□□ -2.08
MSM1YGR171C YNL146C-AQ3E7Z1 64 aa2.05□□□□□ -2.08
MSM1YGR171C MYO1P08964 1928 aa2.05□□□□□ -2.08
MSM1YGR171C USO1P25386 1790 aa2.04□□□□□ -2.08
MSM1YGR171C RPL33AP05744 107 aaKnown RBP2.04□□□□□ -2.08
MSM1YGR171C HMRA2P0CY13 119 aa2.04□□□□□ -2.08
MSM1YGR171C YLR162WQ06235 118 aa2.04□□□□□ -2.08
MSM1YGR171C ECM29P38737 1868 aa2.04□□□□□ -2.08
MSM1YGR171C YAL065CO13511 128 aa2.03□□□□□ -2.08
MSM1YGR171C FPR1P20081 114 aaKnown RBP2.03□□□□□ -2.08
MSM1YGR171C FPR2P32472 135 aa2.03□□□□□ -2.08
MSM1YGR171C YBR027CP38220 110 aa2.03□□□□□ -2.08
MSM1YGR171C SPC1P46965 94 aa2.03□□□□□ -2.08
MSM1YGR171C YCR095W-AQ3E787 52 aa2.03□□□□□ -2.08
MSM1YGR171C TAR1Q8TGM6 124 aa2.03□□□□□ -2.08
MSM1YGR171C YER188C-AP0C0V2 99 aa2.03□□□□□ -2.09
MSM1YGR171C YGL014C-AP0C5N1 53 aa2.03□□□□□ -2.09
MSM1YGR171C MRPL38P35996 138 aaPredicted RBP2.03□□□□□ -2.09
MSM1YGR171C YHR173CP38864 112 aa2.03□□□□□ -2.09
MSM1YGR171C VPS55P47111 140 aa2.03□□□□□ -2.09
MSM1YGR171C YKL023C-AQ2V2P3 75 aa2.03□□□□□ -2.09
MSM1YGR171C YGR121W-AQ3E816 71 aa2.03□□□□□ -2.09
MSM1YGR171C MLP1Q02455 1875 aaKnown RBP2.02□□□□□ -2.09
MSM1YGR171C POR2P40478 281 aa2.02□□□□□ -2.09
MSM1YGR171C IRC21Q04772 201 aa2.02□□□□□ -2.09
MSM1YGR171C YKL065W-AQ2V2P2 73 aa2.02□□□□□ -2.09
MSM1YGR171C COX19Q3E731 98 aa2.02□□□□□ -2.09
MSM1YGR171C GSC2P40989 1895 aa2.02□□□□□ -2.09
MSM1YGR171C TY4B-HP0C2J7 1802 aa2.01□□□□□ -2.09
MSM1YGR171C PAU6P0CE90 120 aa2.01□□□□□ -2.09
MSM1YGR171C PAU18P0CE91 120 aa2.01□□□□□ -2.09
MSM1YGR171C PAU8P0CE92 120 aa2.01□□□□□ -2.09
MSM1YGR171C PAU11P0CE93 120 aa2.01□□□□□ -2.09
MSM1YGR171C QCR9P22289 66 aa2.01□□□□□ -2.09
MSM1YGR171C YSY6P38374 65 aa2.01□□□□□ -2.09
MSM1YGR171C PAU13P38725 120 aa2.01□□□□□ -2.09
MSM1YGR171C YHL037CP38733 133 aa2.01□□□□□ -2.09
MSM1YGR171C PAU4P53427 120 aa2.01□□□□□ -2.09
MSM1YGR171C SNA2P56508 79 aa2.01□□□□□ -2.09
MSM1YGR171C PAU10Q03050 120 aa2.01□□□□□ -2.09
MSM1YGR171C YMR321CQ04898 105 aa2.01□□□□□ -2.09
MSM1YGR171C PAU9Q3E770 120 aa2.01□□□□□ -2.09
MSM1YGR171C MPC2P38857 129 aa2□□□□□ -2.09
MSM1YGR171C YEL008WP40001 126 aa2□□□□□ -2.09
MSM1YGR171C YMR122CQ03879 124 aa2□□□□□ -2.09
MSM1YGR171C YLR285C-AQ3E771 56 aa2□□□□□ -2.09
MSM1YGR171C CDC39P25655 2108 aaKnown RBP2□□□□□ -2.09
MSM1YGR171C YCL048W-AQ2V2Q2 79 aa2□□□□□ -2.09
MSM1YGR171C COA3Q3E7B2 85 aa2□□□□□ -2.09
MSM1YGR171C YBL071CP38185 102 aa1.99□□□□□ -2.09
MSM1YGR171C SPI1P40092 148 aa1.99□□□□□ -2.09
MSM1YGR171C MRX7P53869 86 aa1.99□□□□□ -2.09
MSM1YGR171C ERI1P62651 68 aaKnown RBP1.99□□□□□ -2.09
MSM1YGR171C YCL042WP25572 119 aa1.98□□□□□ -2.09
MSM1YGR171C AIM4P38305 123 aaPredicted RBP1.98□□□□□ -2.09
MSM1YGR171C YDR246W-AQ3E763 66 aa1.98□□□□□ -2.09
MSM1YGR171C YGR035W-AQ45U48 73 aa1.98□□□□□ -2.09
MSM1YGR171C YBT1P32386 1661 aa1.98□□□□□ -2.09
MSM1YGR171C FKS3Q04952 1785 aa1.98□□□□□ -2.09
MSM1YGR171C KOG1P38873 1557 aa1.97□□□□□ -2.09
MSM1YGR171C YBR032WP38223 100 aa1.97□□□□□ -2.09
MSM1YGR171C TY4B-JP47024 1803 aa1.97□□□□□ -2.09
MSM1YGR171C YJL009WP47078 108 aa1.97□□□□□ -2.09
MSM1YGR171C YDR010CQ12426 110 aa1.97□□□□□ -2.09
MSM1YGR171C PMD1P32634 1753 aa1.96□□□□□ -2.09
MSM1YGR171C YOR093CQ12275 1648 aa1.96□□□□□ -2.1
MSM1YGR171C RIM15P43565 1770 aa1.96□□□□□ -2.1
MSM1YGR171C BSC4P53841 131 aa1.96□□□□□ -2.1
MSM1YGR171C YIL156W-BQ2V2P4 73 aa1.96□□□□□ -2.1
MSM1YGR171C YGL041C-BQ3E750 60 aa1.95□□□□□ -2.1
MSM1YGR171C IML1P47170 1584 aa1.95□□□□□ -2.1
MSM1YGR171C APC1P53886 1748 aa1.95□□□□□ -2.1
MSM1YGR171C LAA1P39526 2014 aa1.95□□□□□ -2.1
MSM1YGR171C YSF3P0C074 85 aaPredicted RBP1.94□□□□□ -2.1
MSM1YGR171C PAU1P0CE88 120 aa1.94□□□□□ -2.1
MSM1YGR171C PAU14P0CE89 120 aa1.94□□□□□ -2.1
MSM1YGR171C YIL163CP40448 117 aa1.94□□□□□ -2.1
MSM1YGR171C AIM19P40502 157 aa1.94□□□□□ -2.1
MSM1YGR171C PAU20Q08322 120 aa1.94□□□□□ -2.1
MSM1YGR171C NOP10Q6Q547 58 aaPredicted RBP1.94□□□□□ -2.1
MSM1YGR171C NUP188P52593 1655 aaKnown RBP1.94□□□□□ -2.1
MSM1YGR171C HIR3P47171 1648 aa1.94□□□□□ -2.1
MSM1YGR171C CCW14O13547 238 aa1.94□□□□□ -2.1
MSM1YGR171C PAU7P39545 55 aa1.93□□□□□ -2.1
MSM1YGR171C YOR072WQ08486 104 aa1.92□□□□□ -2.1
MSM1YGR171C PDR15Q04182 1529 aaKnown RBP1.91□□□□□ -2.1
MSM1YGR171C YDL022C-AP0C5L6 82 aa1.91□□□□□ -2.1
MSM1YGR171C YDR210WQ03482 75 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms