RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W UBC4P15731 148 aa-0.41□□□□□ -2.48
CUL3YGR003W MIX14Q04341 121 aa-0.41□□□□□ -2.48
CUL3YGR003W TEL1P38110 2787 aa-0.41□□□□□ -2.48
CUL3YGR003W ECM29P38737 1868 aa-0.42□□□□□ -2.48
CUL3YGR003W COX7P10174 60 aa-0.42□□□□□ -2.48
CUL3YGR003W YOR289WQ12012 251 aaPredicted RBP-0.42□□□□□ -2.48
CUL3YGR003W YDR246W-AQ3E763 66 aa-0.42□□□□□ -2.48
CUL3YGR003W YOS1Q3E834 85 aa-0.42□□□□□ -2.48
CUL3YGR003W NTE1Q04958 1679 aa-0.42□□□□□ -2.48
CUL3YGR003W YOR304C-AO14468 76 aa-0.42□□□□□ -2.48
CUL3YGR003W HMRA1P0CY11 126 aa-0.42□□□□□ -2.48
CUL3YGR003W UBC5P15732 148 aa-0.43□□□□□ -2.48
CUL3YGR003W YHR050W-AQ05451 56 aa-0.43□□□□□ -2.48
CUL3YGR003W YMR122W-AQ3E842 84 aa-0.43□□□□□ -2.48
CUL3YGR003W SPP41P38904 1435 aa-0.43□□□□□ -2.48
CUL3YGR003W DNF3Q12674 1656 aa-0.43□□□□□ -2.48
CUL3YGR003W AIM19P40502 157 aa-0.44□□□□□ -2.48
CUL3YGR003W TY1B-DR6P0C2I3 1755 aa-0.44□□□□□ -2.48
CUL3YGR003W TY1B-LR2P0C2I5 1755 aa-0.44□□□□□ -2.48
CUL3YGR003W TY1B-JR2P47100 1755 aaKnown RBP-0.44□□□□□ -2.48
CUL3YGR003W TY1B-MR1Q04214 1755 aa-0.44□□□□□ -2.48
CUL3YGR003W TY1B-MR2Q04670 1755 aaKnown RBP-0.44□□□□□ -2.48
CUL3YGR003W TY1B-NL1Q12112 1755 aa-0.44□□□□□ -2.48
CUL3YGR003W TY1B-GR1Q12141 1755 aa-0.44□□□□□ -2.48
CUL3YGR003W TY1B-GR3Q12316 1755 aa-0.44□□□□□ -2.48
CUL3YGR003W TY1B-PLQ12414 1755 aaKnown RBP-0.44□□□□□ -2.48
CUL3YGR003W TY1B-ORQ92393 1755 aa-0.44□□□□□ -2.48
CUL3YGR003W KSH1Q8TGJ3 72 aa-0.44□□□□□ -2.48
CUL3YGR003W ECM12O13529 151 aa-0.45□□□□□ -2.48
CUL3YGR003W PDX3P38075 228 aaKnown RBP-0.45□□□□□ -2.48
CUL3YGR003W CSF1Q12150 2958 aa-0.45□□□□□ -2.48
CUL3YGR003W YER137CP40083 148 aaKnown RBP-0.45□□□□□ -2.48
CUL3YGR003W YMR090WQ04304 227 aaKnown RBP-0.45□□□□□ -2.48
CUL3YGR003W SDH6Q3E785 79 aa-0.45□□□□□ -2.48
CUL3YGR003W TY1B-DR5P0C2I2 1755 aa-0.45□□□□□ -2.48
CUL3YGR003W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.45□□□□□ -2.48
CUL3YGR003W TY1B-ER2Q03619 1755 aa-0.45□□□□□ -2.48
CUL3YGR003W TY1B-DR1Q03855 1755 aa-0.45□□□□□ -2.48
CUL3YGR003W TY1B-ML1Q04711 1755 aaKnown RBP-0.45□□□□□ -2.48
CUL3YGR003W TY1B-LR1Q12088 1755 aaKnown RBP-0.45□□□□□ -2.48
CUL3YGR003W TY1B-GR2Q12269 1755 aa-0.45□□□□□ -2.48
CUL3YGR003W BPT1P14772 1559 aa-0.45□□□□□ -2.48
CUL3YGR003W MEC1P38111 2368 aa-0.46□□□□□ -2.48
CUL3YGR003W YAL065CO13511 128 aa-0.46□□□□□ -2.48
CUL3YGR003W YHR214C-DP0CX93 97 aa-0.46□□□□□ -2.48
CUL3YGR003W NHP2P32495 156 aaPredicted RBP-0.46□□□□□ -2.48
CUL3YGR003W YBR090CP38253 122 aa-0.46□□□□□ -2.48
CUL3YGR003W EMC5P40540 141 aa-0.46□□□□□ -2.48
CUL3YGR003W SWC7Q06707 132 aa-0.46□□□□□ -2.48
CUL3YGR003W TY3B-IQ7LHG5 1498 aaKnown RBP-0.46□□□□□ -2.48
CUL3YGR003W TOM6P33448 61 aa-0.46□□□□□ -2.48
CUL3YGR003W ATP18P81450 59 aa-0.46□□□□□ -2.48
CUL3YGR003W PAU23Q07987 124 aa-0.46□□□□□ -2.48
CUL3YGR003W PAU17Q12370 124 aa-0.46□□□□□ -2.48
CUL3YGR003W YBL044WP38194 122 aa-0.47□□□□□ -2.48
CUL3YGR003W TY1B-DR3Q99231 1755 aa-0.47□□□□□ -2.49
CUL3YGR003W RGI1P40043 161 aaPredicted RBP-0.48□□□□□ -2.49
CUL3YGR003W RPS12P48589 143 aaKnown RBP-0.48□□□□□ -2.49
CUL3YGR003W BSC4P53841 131 aa-0.48□□□□□ -2.49
CUL3YGR003W FPR2P32472 135 aa-0.48□□□□□ -2.49
CUL3YGR003W PDR11P40550 1411 aa-0.48□□□□□ -2.49
CUL3YGR003W POL1P13382 1468 aa-0.49□□□□□ -2.49
CUL3YGR003W PDR10P51533 1564 aa-0.49□□□□□ -2.49
CUL3YGR003W YPR108W-AQ3E7B3 70 aa-0.49□□□□□ -2.49
CUL3YGR003W TY1B-JR1P47098 1755 aa-0.49□□□□□ -2.49
CUL3YGR003W TY1B-ML2Q03434 1755 aaKnown RBP-0.49□□□□□ -2.49
CUL3YGR003W TY1B-ER1Q03612 1755 aa-0.49□□□□□ -2.49
CUL3YGR003W TY1B-OLQ12273 1755 aa-0.49□□□□□ -2.49
CUL3YGR003W RPA190P10964 1664 aaKnown RBP-0.5□□□□□ -2.49
CUL3YGR003W UTP10P42945 1769 aaKnown RBP-0.5□□□□□ -2.49
CUL3YGR003W SNU13P39990 126 aaKnown RBP-0.5□□□□□ -2.49
CUL3YGR003W FYV7Q12247 151 aa-0.5□□□□□ -2.49
CUL3YGR003W YIL156W-BQ2V2P4 73 aa-0.5□□□□□ -2.49
CUL3YGR003W YMR105W-AQ8TGS8 64 aa-0.5□□□□□ -2.49
CUL3YGR003W IRA2P19158 3079 aa-0.5□□□□□ -2.49
CUL3YGR003W TY2B-LR1P0C2J3 1770 aa-0.5□□□□□ -2.49
CUL3YGR003W TY2B-FP0CX63 1770 aa-0.5□□□□□ -2.49
CUL3YGR003W TY2B-GR2P0CX64 1770 aa-0.5□□□□□ -2.49
CUL3YGR003W TY2B-CP25384 1770 aa-0.5□□□□□ -2.49
CUL3YGR003W TY2B-DR2Q03494 1770 aa-0.5□□□□□ -2.49
CUL3YGR003W TY2B-DR3Q07791 1770 aaKnown RBP-0.5□□□□□ -2.49
CUL3YGR003W TY2B-OR1Q12113 1770 aa-0.5□□□□□ -2.49
CUL3YGR003W TY2B-DR1Q12472 1770 aa-0.5□□□□□ -2.49
CUL3YGR003W TY2B-BQ12491 1770 aa-0.5□□□□□ -2.49
CUL3YGR003W TY2B-OR2Q12501 1770 aa-0.5□□□□□ -2.49
CUL3YGR003W IRA1P18963 3092 aa-0.51□□□□□ -2.49
CUL3YGR003W YCR085WP25650 117 aa-0.51□□□□□ -2.49
CUL3YGR003W YHL005CP38752 130 aa-0.51□□□□□ -2.49
CUL3YGR003W MSL1P40567 111 aaPredicted RBP-0.51□□□□□ -2.49
CUL3YGR003W NOP10Q6Q547 58 aaPredicted RBP-0.52□□□□□ -2.49
CUL3YGR003W TSC11P40061 1430 aa-0.52□□□□□ -2.49
CUL3YGR003W MOT1P32333 1867 aa-0.52□□□□□ -2.49
CUL3YGR003W THO2P53552 1597 aaKnown RBP-0.52□□□□□ -2.49
CUL3YGR003W YGR025WP53216 100 aa-0.52□□□□□ -2.49
CUL3YGR003W YDR042CQ03205 200 aa-0.52□□□□□ -2.49
CUL3YGR003W YMR001C-AQ8TGS9 76 aa-0.53□□□□□ -2.49
CUL3YGR003W TY1B-DR4Q07793 1604 aa-0.53□□□□□ -2.49
CUL3YGR003W TY1B-NL2Q99337 1749 aaKnown RBP-0.53□□□□□ -2.49
CUL3YGR003W SCP1Q08873 200 aa-0.54□□□□□ -2.5
CUL3YGR003W YDR029WQ12111 104 aa-0.54□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms