RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W FLO9P39712 1322 aa3.66□□□□□ -1.82
PDE1YGL248W NUP192P47054 1683 aa3.65□□□□□ -1.82
PDE1YGL248W PFY1P07274 126 aa3.65□□□□□ -1.83
PDE1YGL248W YMR321CQ04898 105 aa3.65□□□□□ -1.83
PDE1YGL248W LSM6Q06406 86 aaKnown RBP3.65□□□□□ -1.83
PDE1YGL248W YIL102C-AQ2V2P5 75 aa3.65□□□□□ -1.83
PDE1YGL248W YCR095W-AQ3E787 52 aa3.65□□□□□ -1.83
PDE1YGL248W YHL037CP38733 133 aa3.64□□□□□ -1.83
PDE1YGL248W LST8P41318 303 aa3.64□□□□□ -1.83
PDE1YGL248W RPS22BQ3E7Y3 130 aaKnown RBP3.64□□□□□ -1.83
PDE1YGL248W YRF1-1P0CX20 1796 aa3.63□□□□□ -1.83
PDE1YGL248W YRF1-5P0CX21 1796 aa3.63□□□□□ -1.83
PDE1YGL248W YRF1-8P0CX22 1796 aa3.63□□□□□ -1.83
PDE1YGL248W SNA2P56508 79 aa3.63□□□□□ -1.83
PDE1YGL248W YHR007C-AQ07074 71 aa3.63□□□□□ -1.83
PDE1YGL248W YOR314WQ12506 109 aa3.63□□□□□ -1.83
PDE1YGL248W YCL048W-AQ2V2Q2 79 aa3.63□□□□□ -1.83
PDE1YGL248W DNF3Q12674 1656 aa3.62□□□□□ -1.83
PDE1YGL248W BCK1Q01389 1478 aa3.62□□□□□ -1.83
PDE1YGL248W FPR1P20081 114 aaKnown RBP3.62□□□□□ -1.83
PDE1YGL248W YJL144WP47009 104 aa3.61□□□□□ -1.83
PDE1YGL248W YKL065W-AQ2V2P2 73 aa3.61□□□□□ -1.83
PDE1YGL248W ECM29P38737 1868 aa3.6□□□□□ -1.83
PDE1YGL248W YGL260WP53056 76 aa3.6□□□□□ -1.83
PDE1YGL248W YLR285C-AQ3E771 56 aa3.6□□□□□ -1.83
PDE1YGL248W MRPL38P35996 138 aaPredicted RBP3.59□□□□□ -1.83
PDE1YGL248W YER084WP40057 128 aa3.59□□□□□ -1.83
PDE1YGL248W YAL065CO13511 128 aa3.58□□□□□ -1.84
PDE1YGL248W YER188C-AP0C0V2 99 aa3.58□□□□□ -1.84
PDE1YGL248W MRPL31P14063 131 aaPredicted RBP3.58□□□□□ -1.84
PDE1YGL248W PDX3P38075 228 aaKnown RBP3.58□□□□□ -1.84
PDE1YGL248W SPC1P46965 94 aa3.58□□□□□ -1.84
PDE1YGL248W IRC21Q04772 201 aa3.58□□□□□ -1.84
PDE1YGL248W RRP5Q05022 1729 aaKnown RBP3.57□□□□□ -1.84
PDE1YGL248W YMR230W-AQ3E7B5 62 aa3.57□□□□□ -1.84
PDE1YGL248W YGL014C-AP0C5N1 53 aa3.56□□□□□ -1.84
PDE1YGL248W TIM12P32830 109 aa3.56□□□□□ -1.84
PDE1YGL248W YJR146WP47174 117 aa3.56□□□□□ -1.84
PDE1YGL248W RDS3Q06835 107 aaPredicted RBP3.56□□□□□ -1.84
PDE1YGL248W GIS2P53849 153 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
PDE1YGL248W MIX17Q03667 156 aa3.55□□□□□ -1.84
PDE1YGL248W RIF1P29539 1916 aa3.54□□□□□ -1.84
PDE1YGL248W MPC2P38857 129 aa3.54□□□□□ -1.84
PDE1YGL248W SED1Q01589 338 aa3.54□□□□□ -1.84
PDE1YGL248W YMR122CQ03879 124 aa3.54□□□□□ -1.84
PDE1YGL248W QCR9P22289 66 aa3.53□□□□□ -1.84
PDE1YGL248W VPS55P47111 140 aa3.53□□□□□ -1.84
PDE1YGL248W MRX7P53869 86 aa3.53□□□□□ -1.84
PDE1YGL248W APC1P53886 1748 aa3.53□□□□□ -1.85
PDE1YGL248W CCW14O13547 238 aa3.52□□□□□ -1.85
PDE1YGL248W PAU6P0CE90 120 aa3.52□□□□□ -1.85
PDE1YGL248W PAU18P0CE91 120 aa3.52□□□□□ -1.85
PDE1YGL248W YBL071CP38185 102 aa3.52□□□□□ -1.85
PDE1YGL248W YIL163CP40448 117 aa3.52□□□□□ -1.85
PDE1YGL248W USO1P25386 1790 aa3.52□□□□□ -1.85
PDE1YGL248W CDC39P25655 2108 aaKnown RBP3.52□□□□□ -1.85
PDE1YGL248W RPL33AP05744 107 aaKnown RBP3.51□□□□□ -1.85
PDE1YGL248W YHR173CP38864 112 aa3.51□□□□□ -1.85
PDE1YGL248W YLR162WQ06235 118 aa3.51□□□□□ -1.85
PDE1YGL248W COX19Q3E731 98 aa3.51□□□□□ -1.85
PDE1YGL248W YGR121W-AQ3E816 71 aa3.51□□□□□ -1.85
PDE1YGL248W PAU8P0CE92 120 aa3.5□□□□□ -1.85
PDE1YGL248W PAU11P0CE93 120 aa3.5□□□□□ -1.85
PDE1YGL248W PAU13P38725 120 aa3.5□□□□□ -1.85
PDE1YGL248W DSE2P38844 325 aa3.5□□□□□ -1.85
PDE1YGL248W PAU4P53427 120 aa3.5□□□□□ -1.85
PDE1YGL248W PAU10Q03050 120 aa3.5□□□□□ -1.85
PDE1YGL248W VAM10Q08474 114 aa3.5□□□□□ -1.85
PDE1YGL248W PRM7Q12459 698 aa3.5□□□□□ -1.85
PDE1YGL248W PAU9Q3E770 120 aa3.5□□□□□ -1.85
PDE1YGL248W YSY6P38374 65 aa3.49□□□□□ -1.85
PDE1YGL248W SPI1P40092 148 aa3.49□□□□□ -1.85
PDE1YGL248W BSC4P53841 131 aa3.49□□□□□ -1.85
PDE1YGL248W AIM4P38305 123 aaPredicted RBP3.48□□□□□ -1.85
PDE1YGL248W AIM19P40502 157 aa3.48□□□□□ -1.85
PDE1YGL248W TAR1Q8TGM6 124 aa3.48□□□□□ -1.85
PDE1YGL248W YSF3P0C074 85 aaPredicted RBP3.47□□□□□ -1.85
PDE1YGL248W FPR2P32472 135 aa3.47□□□□□ -1.85
PDE1YGL248W YKL023C-AQ2V2P3 75 aa3.47□□□□□ -1.85
PDE1YGL248W YGL041C-BQ3E750 60 aa3.47□□□□□ -1.85
PDE1YGL248W UTP10P42945 1769 aaKnown RBP3.46□□□□□ -1.86
PDE1YGL248W PAU1P0CE88 120 aa3.45□□□□□ -1.86
PDE1YGL248W PAU14P0CE89 120 aa3.45□□□□□ -1.86
PDE1YGL248W YDR010CQ12426 110 aa3.45□□□□□ -1.86
PDE1YGL248W COA3Q3E7B2 85 aa3.45□□□□□ -1.86
PDE1YGL248W YGR035W-AQ45U48 73 aa3.44□□□□□ -1.86
PDE1YGL248W ERI1P62651 68 aaKnown RBP3.43□□□□□ -1.86
PDE1YGL248W UBR2Q07963 1872 aa3.43□□□□□ -1.86
PDE1YGL248W FKS3Q04952 1785 aa3.41□□□□□ -1.86
PDE1YGL248W YDR210WQ03482 75 aa3.41□□□□□ -1.86
PDE1YGL248W LCL2Q08045 131 aa3.41□□□□□ -1.86
PDE1YGL248W CCW12Q12127 133 aa3.41□□□□□ -1.86
PDE1YGL248W YDR246W-AQ3E763 66 aa3.41□□□□□ -1.86
PDE1YGL248W NOP10Q6Q547 58 aaPredicted RBP3.41□□□□□ -1.86
PDE1YGL248W PMD1P32634 1753 aa3.4□□□□□ -1.86
PDE1YGL248W URB1P34241 1764 aaKnown RBP3.4□□□□□ -1.86
PDE1YGL248W RPS11AP0CX47 156 aaKnown RBP3.4□□□□□ -1.87
PDE1YGL248W RPS11BP0CX48 156 aaKnown RBP3.4□□□□□ -1.87
PDE1YGL248W AGA2P32781 87 aa3.4□□□□□ -1.87
PDE1YGL248W PAU7P39545 55 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 82.1 ms